1. Browse the Database
  2. View Redoxidase
Entry information : ShyAPx-R
Entry ID 5194
Creation 2007-04-13 (Christophe Dunand)
Last sequence changes 2010-08-09 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-05-03 (Christophe Dunand)
Peroxidase information: ShyAPx-R
Name ShyAPx-R
Class Ascorbate peroxidase related     [Orthogroup: APx-R001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Saccharum
Organism Saccharum hybrid    [TaxId: 128810 ]
Cellular localisation N/D
Tissue type Barks
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ShyAPx-R
start..stop		 S start..stop
SbAPx-R 385 9.38e-137 1..206 37..242
ZmAPx-R01 370 4.83e-131 2..206 39..242
SiAPx-R 348 2.49e-122 1..206 37..242
ObrAPx-R 312 5.33e-108 1..206 34..240
Literature and cross-references ShyAPx-R
Literature Vettore,A.L., da Silva,F.R., Kemper,E.L. and Arruda,P. The libraries that made SUCEST. Genet. Mol. Biol. 24 (1-4), 1-7 (2001)
EST ref. GenBank:   CA169223.1 [3' end]  DV733615.1 [Fragment]
Protein sequence: ShyAPx-R
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   206
PWM (Da):   %s   21915.58  
PI (pH):   %s   8.72
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
IKASAAGSKH AADSVCSQLF EQETEDSLSG PRSSWRIRRR DFASAILLPF LLPRISISIA AEIYDASIIR SGVRSVLTKA KAAGVLRLVF HDAGTFEIGD KSGGMNGSII YEVDRPENTG 
LNRSIKILRK AKEGIDNVQK VSWADLIAVA GAEAVALCGG PEIPVRLGRL DSSTADPTGK LPEETLDATS LKTLFSKKGF SVQEMV 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs (CA169223 and CA169222). 3' and 5' ends are missing.