Entry information : PstiKat01 ( PXP-9 / CAT1)
Entry ID 5255
Creation 2007-04-17 (Marcel Zamocky)
Last sequence changes 2007-04-17 (Marcel Zamocky)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-01-27 (Achraf Jemmat)
Peroxidase information: PstiKat01 ( PXP-9 / CAT1)
Name (synonym) PstiKat01 ( PXP-9 / CAT1)
Class Catalase    [Orthogroup: Kat001]
Taxonomy Eukaryota Fungi Ascomycota Saccharomycetes Saccharomycetaceae Pichia
Organism Pichia stipitis    [TaxId: 4924 ]
Cellular localisation Peroxisomal
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PstiKat01
start..stop
S start..stop
DhKat02 908 0 1..486 1..485
CtKat01 899 0 1..486 1..485
CduKat01 881 0 1..486 1..485
CalKat01 880 0 1..486 1..485
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 735590..737050 1461  
complement(join(735590..737050))


exon

Literature and cross-references PstiKat01 ( PXP-9 / CAT1)
Literature Jeffries,T.W. et al., Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Nat. Biotechnol. 25 (3), 319-326 (2007)
Protein ref. GenBank:   ABN64878.1 UniProtKB:   A3LNL4
DNA ref. GenBank:   NC_009042.1 JGI genome:   chr_2.1 (737050..735590)
mRNA ref. GenBank:   XM_001382870.1
Protein sequence: PstiKat01 ( PXP-9 / CAT1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   486
PWM (Da):   %s   54632.74  
PI (pH):   %s   6.55
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAPVFTNSNG CPIPGDAFAT QRIGKHGPLL LQDFNLIDSL AHFDRERIPE RVVHAKGSGA YGVFEVTDDI TDVCGAAFLD TIGKKTKVFT RFSTVGGEAG SADTARDPRG FATKFYTEEG  NLDLVYNNTP VFFIRDPSKF PHFIHTQKRN PETHLKDANM FWDYLTTNQE AIHQVCILFS DRGTPASYRE MNGYSGHTYK WSNKKGEWFY VQVHFISDQG IKTLSNEEAG ALAGSNPDYA  QEDLFKNIAA GNGPSWTCYV QTMTQEQAKN APFSVFDLTK VWPHSDYPLR RFGKFQLNEN PKNYFAEVEQ AAFSPAHTVP YMEPSADPVL QSRLFSYADT HRHRLGTNYT QIPVNCPVTG  AVYNPHMRDG HMNVNGNLGS TPNYLDTSKP VEFKQFALQE EQEVWEGAAC PFHWKYTDED FKQATALYNV LKRYPNQQAH LAHNVSVHVA AADAHIQDRV FEMFSKVHPD LGAAIKKETL 
QLSPRK 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2, no intron). No EST available. Strain="CBS 6054".
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTCCTG TCTTCACCAA CTCCAATGGC TGTCCCATCC CAGGCGACGC CTTTGCTACC CAGAGAATCG GCAAGCACGG TCCTCTCTTG TTGCAGGACT TCAACTTGAT TGACTCTCTT  GCCCACTTCG ACAGAGAAAG AATCCCAGAA AGAGTTGTCC ATGCCAAGGG ATCCGGTGCC TACGGTGTTT TCGAAGTCAC AGACGACATC ACAGATGTCT GTGGTGCCGC TTTCTTGGAC  ACCATCGGTA AGAAGACCAA GGTTTTCACC CGTTTCTCCA CTGTTGGTGG TGAAGCCGGT TCTGCTGACA CCGCTAGAGA CCCAAGAGGT TTCGCTACCA AGTTCTACAC CGAAGAAGGT  AACTTAGACT TGGTCTACAA CAACACTCCA GTCTTTTTCA TCAGAGACCC TTCCAAGTTC CCTCACTTCA TCCACACCCA AAAGAGAAAC CCAGAGACCC ACTTGAAGGA TGCTAACATG  TTCTGGGACT ATTTGACCAC CAACCAGGAA GCCATCCACC AAGTTTGTAT TCTTTTCTCC GACAGAGGTA CCCCAGCTTC CTACAGAGAA ATGAACGGTT ACTCTGGACA CACCTACAAG  TGGTCCAACA AGAAGGGTGA ATGGTTCTAC GTGCAGGTCC ACTTTATTTC TGACCAGGGT ATCAAGACTT TGTCGAACGA AGAGGCTGGT GCCTTGGCCG GTTCAAACCC AGACTATGCC  CAAGAAGACT TGTTCAAGAA CATCGCTGCA GGCAACGGTC CATCGTGGAC TTGTTATGTG CAGACCATGA CTCAAGAACA GGCCAAGAAC GCTCCATTCT CAGTCTTTGA CTTGACCAAG  GTCTGGCCTC ACAGCGATTA TCCTTTGAGA AGATTCGGTA AGTTCCAACT TAACGAAAAC CCAAAGAACT ACTTTGCCGA AGTTGAACAA GCTGCCTTCT CTCCAGCCCA CACTGTTCCA  TACATGGAAC CATCGGCTGA CCCAGTTTTG CAATCGAGAT TGTTCTCTTA TGCCGACACA CACAGACACA GATTGGGTAC AAACTACACC CAGATTCCTG TCAACTGTCC AGTTACAGGC  GCTGTCTACA ACCCACACAT GAGAGACGGT CACATGAACG TGAACGGCAA TTTGGGAAGC ACTCCAAACT ACTTGGACAC TTCTAAGCCT GTTGAATTCA AGCAATTCGC CTTGCAAGAA  GAACAAGAAG TCTGGGAAGG TGCTGCTTGT CCATTCCACT GGAAGTACAC TGATGAAGAC TTCAAGCAAG CCACAGCTTT GTACAATGTC TTGAAGAGAT ATCCTAACCA ACAGGCCCAT  TTGGCCCACA ACGTCTCAGT GCATGTTGCT GCTGCTGACG CTCACATCCA AGACAGAGTG TTTGAAATGT TCTCCAAGGT CCACCCAGAC TTGGGCGCTG CCATTAAGAA GGAAACCTTG 
CAATTGTCTC CAAGAAAGTA A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTCCTG TCTTCACCAA CTCCAATGGC TGTCCCATCC CAGGCGACGC CTTTGCTACC CAGAGAATCG GCAAGCACGG TCCTCTCTTG TTGCAGGACT TCAACTTGAT TGACTCTCTT  GCCCACTTCG ACAGAGAAAG AATCCCAGAA AGAGTTGTCC ATGCCAAGGG ATCCGGTGCC TACGGTGTTT TCGAAGTCAC AGACGACATC ACAGATGTCT GTGGTGCCGC TTTCTTGGAC  ACCATCGGTA AGAAGACCAA GGTTTTCACC CGTTTCTCCA CTGTTGGTGG TGAAGCCGGT TCTGCTGACA CCGCTAGAGA CCCAAGAGGT TTCGCTACCA AGTTCTACAC CGAAGAAGGT  AACTTAGACT TGGTCTACAA CAACACTCCA GTCTTTTTCA TCAGAGACCC TTCCAAGTTC CCTCACTTCA TCCACACCCA AAAGAGAAAC CCAGAGACCC ACTTGAAGGA TGCTAACATG  TTCTGGGACT ATTTGACCAC CAACCAGGAA GCCATCCACC AAGTTTGTAT TCTTTTCTCC GACAGAGGTA CCCCAGCTTC CTACAGAGAA ATGAACGGTT ACTCTGGACA CACCTACAAG  TGGTCCAACA AGAAGGGTGA ATGGTTCTAC GTGCAGGTCC ACTTTATTTC TGACCAGGGT ATCAAGACTT TGTCGAACGA AGAGGCTGGT GCCTTGGCCG GTTCAAACCC AGACTATGCC  CAAGAAGACT TGTTCAAGAA CATCGCTGCA GGCAACGGTC CATCGTGGAC TTGTTATGTG CAGACCATGA CTCAAGAACA GGCCAAGAAC GCTCCATTCT CAGTCTTTGA CTTGACCAAG  GTCTGGCCTC ACAGCGATTA TCCTTTGAGA AGATTCGGTA AGTTCCAACT TAACGAAAAC CCAAAGAACT ACTTTGCCGA AGTTGAACAA GCTGCCTTCT CTCCAGCCCA CACTGTTCCA  TACATGGAAC CATCGGCTGA CCCAGTTTTG CAATCGAGAT TGTTCTCTTA TGCCGACACA CACAGACACA GATTGGGTAC AAACTACACC CAGATTCCTG TCAACTGTCC AGTTACAGGC  GCTGTCTACA ACCCACACAT GAGAGACGGT CACATGAACG TGAACGGCAA TTTGGGAAGC ACTCCAAACT ACTTGGACAC TTCTAAGCCT GTTGAATTCA AGCAATTCGC CTTGCAAGAA  GAACAAGAAG TCTGGGAAGG TGCTGCTTGT CCATTCCACT GGAAGTACAC TGATGAAGAC TTCAAGCAAG CCACAGCTTT GTACAATGTC TTGAAGAGAT ATCCTAACCA ACAGGCCCAT  TTGGCCCACA ACGTCTCAGT GCATGTTGCT GCTGCTGACG CTCACATCCA AGACAGAGTG TTTGAAATGT TCTCCAAGGT CCACCCAGAC TTGGGCGCTG CCATTAAGAA GGAAACCTTG 
CAATTGTCTC CAAGAAAGTA A 

Retrieve as FASTA