Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
227 |
PWM (Da): |
25528.03 |
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PI (pH):
| 6.03 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
LILDNVEGLTSEKLTGPNLNSLRGFEVIDKIKYLLEEECPITVSCADILAMAARHVVELVNTALSQGLSECNFKQQGLDIEDLVTLSGSHTIGRPRCLSFRHMVFDAKEEYDYGYDDYK*YTSLKRILRSICPVEGRDNKSAPLDFQTPKRFGNHYFINILEGKDLLGSDNVLISHDLLGKITEQVWDYASNEKILFASFAKSMIRMGNINVLTGNKGEIRRNCRFV |
Retrieve as FASTA
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Remarks |
Pseudogene from genomic. Incorrect prediction from phytozome (first exon and a sequence in the frame are missing, stop in frame). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CTGATTTTGGACAACGTGGAGGGCTTGACAAGTGAAAAGCTGACTGGACCAAATCTGAACTCTTTACGTGGATTTGAGGTCATAGACAAGATTAAGTATTTGCTTGAAGAAGAATGTCCT ATTACTGTTTCATGTGCTGACATCCTTGCGATGGCTGCACGTCATGTTGTTGAATTGGTAAACACTGCTTTGTCACAGGGGTTAAGTGAATGTANNNNNNNNNNNNNNNNNNNNNNGCTT TACATCAATTTCTATCATTTGTTTTTGAAGAGAGGAGGACAAAGATGGGAAGTCTTGGTTGAAAGGATGGATGCTCTGGAGTGAAGTTTCAGTGGAGCTAACATATTAATTCCTGCTCCA AATTCATCTTTCGAGGTTCTCATACATAATTTTAAGCAACAAGGCCTCGACATAGAAGACTTGGTAACTCTATCAGGTATATTTATTATTTTGACAACATATATATACAACTTTCTAAAT TGTTGTTAGTACAACTTTCTAATCAAAATTAGTGTCCCACATCTTCATAAAAAAATAATTAGTGACCCACCTTAATGAATTATTGAAATGAAACTAATTTTTAATTGAAAAATAACACAA ACAAAATCTCGATTATAATTGATGAATAACATAAACAATACCTATAAAAACTCTAATTTTGTCCTTATAATTTGTTCAAAGTTCAATCAAATGTTAATATTTTGGGGCTCTGACAAAGGA AGAAGAGATTAAGCACGTACAGTTGTTGCTTGACAAAATACAGGTAGCCATACTATAGGAAGACCAAGATGTCTAAGCTTTAGGCACATGGTATTTGATGCAAAAGAGGAATATGACTAT GGTTATGATGACTACAAATGATACACAAGTCTCAAGAGAATCCTGCGGTCCATATGCCCTGTTGAGGGAAGGGACAATAAATCTGCACCCTTGGATTTTCAAACCCCAAAAAGATTTGGC AATCACTACTTCATAAACATTCTTGAAGGGAAAGACTTGTTAGGTTCTGACAATGTTCTTATTAGCCATGACTTACTTGGAAAGATTACAGAGCAGGTGTGGGATTATGCCTCTAATGAA AAAATTTTGTTTGCTTCATTTGCTAAATCTATGATTAGGATGGGAAACATCAATGTTCTTACTGGAAATAAGGGGGAAATTAGGAGGAATTGTAGGTTTGTCAAT |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CTGATTTTGGACAACGTGGAGGGCTTGACAAGTGAAAAGCTGACTGGACCAAATCTGAACTCTTTACGTGGATTTGAGGTCATAGACAAGATTAAGTATTTGCTTGAAGAAGAATGTCCT ATTACTGTTTCATGTGCTGACATCCTTGCGATGGCTGCACGTCATGTTGTTGAATTGGTAAACACTGCTTTGTCACAGGGGTTAAGTGAATGTAATTTTAAGCAACAAGGCCTCGACATA GAAGACTTGGTAACTCTATCAGGTAGCCATACTATAGGAAGACCAAGATGTCTAAGCTTTAGGCACATGGTATTTGATGCAAAAGAGGAATATGACTATGGTTATGATGACTACAAATGA TACACAAGTCTCAAGAGAATCCTGCGGTCCATATGCCCTGTTGAGGGAAGGGACAATAAATCTGCACCCTTGGATTTTCAAACCCCAAAAAGATTTGGCAATCACTACTTCATAAACATT CTTGAAGGGAAAGACTTGTTAGGTTCTGACAATGTTCTTATTAGCCATGACTTACTTGGAAAGATTACAGAGCAGGTGTGGGATTATGCCTCTAATGAAAAAATTTTGTTTGCTTCATTT GCTAAATCTATGATTAGGATGGGAAACATCAATGTTCTTACTGGAAATAAGGGGGAAATTAGGAGGAATTGTAGGTTTGTCAAT |
Retrieve as FASTA
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