1. Browse the Database
  2. View Redoxidase
Entry information : CimLDS02
Entry ID 5342
Creation 2007-05-14 (Christophe Dunand)
Last sequence changes 2007-05-14 (Christophe Dunand)
Sequence status complete
Reviewer Marcel Zamocky
Last annotation changes 2007-05-14 (Marcel Zamocky)
Peroxidase information: CimLDS02
Name CimLDS02
Class Linoleate diol synthase (PGHS like)    [Orthogroup: LDS001]
Taxonomy Eukaryota Fungi Ascomycota Eurotiomycetes Coccidioides
Organism Coccidioides immitis    [TaxId: 5501 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CimLDS02
start..stop		 S start..stop
CposLDS02_silveira 2129 0 1..1044 1..1045
AteLDS05 1248 0 12..1051 17..1043
AclLDS02 1208 0 16..1053 18..1055
AorLDS05 1158 0 9..907 13..921
Literature and cross-references CimLDS02
Literature The Broad Institute Genome Sequencing Platform; Birren B., Lander E., Galagan J., Devon K., Nusbaum C., Henn M., Ma L.-J., Jaffe D., Butler J., Alvarez P., Gnerre S., Grabherr M., Kleber M., Mauceli E., Brockman W., Rounsley S., Young S., LaButti K., Pushparaj V., DeCaprio D., Crawford M., Koehrsen M., Engels R., Montgomery P., Pearson M., Howarth C., Kodira C., Zeng Q., Yandava C., Alvarado L., Oleary S., Orbach M.J., Galgiani J., Mandel M.A., Kellner E.M.; "Annotation of the Coccidioides immitis RS Genome."; Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
DNA sequence http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=AAEC02000044.1
Protein ref. GenPept:   EAS28473 UniProtKB_Uniparc:   Q1DJ36
Protein sequence: CimLDS02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1056
PWM (Da):   %s   118087.73  
PI (pH):   %s   7.32
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDARKSDRDT QSGLANVLSG TMADIFSQTG RIGSDIQVIR EGAETMAAGG IIDDRQYTIE HIIQLAASLP NGSKLRDKLT DQFVTTLWNN LEHPPLSYLG DQFKYRSADG SNNNIMYPHL  GASGSHYARS VVPQRPKMTN LPDPELIFET LMKRNGPSKD HPTKISSMLF HFATIIIHDI FRTDELDISR LKNSSYLDLG PLYGHDEEQQ KGVRQFKDGL LKNDAFAEER VLGQPPGVCA  LLVAFNRFHN YVVGELATIN ERGRFTMPVE GSPNYEKALL KRDNDLFQTG RLVTCGLYIN VILNDYLRAI LNLNDNDKDS DWKLDPRLAV GIFDATGVPR GVGNQVSAEF NVIYRFHPAV  SNNDEAWANQ FFKDVFGNDK DPAKISVNEF RLGIWNWMRK LDKDPAKREF GGLKRQSNGM FKDSDLVKLL QESTEAVAGS FGGRNVPAVM KVVEMLGIEQ GRQWGLATLN EFRAFFKLKR  HEKFLDVNSD PSIAETLESL YGHPDDIELY TGVHVEEAKK PFMPGSGLCP GFTVSTAILY DAVALVRGDR FYTIDYSPES LTSFGFSVAN SSFDVAKGGV MYKLLMRAFP SWYRPNSVYA  LFPFTTPEKN REVFTKHGSV NQYSFDRPSL TMPPIPVSTW KGVVDVLNDQ ARFKVPWGPH TFEMTKHDYM LSGDSKANAE QREFVSKCLF EPKKGLEEVR KFYEAVTLNF LRKHGRKAGN  TYQVDAVREI GNLVHANFAG HFFQIPLQSA SGGPDSFTEQ ELYDSLAHLF AYVFLDVDPA KSFERSVVGA RDSARLGKVV SQAVAAVQAG GFFFFKHLEH AKPEILSEYG ARLVERLSRG  RKSVDEVTWT IIPTAAASVA TQAQGWAQMF DLYMSDKYYS HWKTIEKLSR SDAPEDFEKL KRYALEGALS YRLRLATPAY GVLRVAATNG TIQDGSRTVS YKPGDVIFTN FMTAGADPSK 
FPDPEAIKLD RPEEDYIHHG WGPHACLGRP FVTTAAASML RVFGRLDNVR RAPGPPGEMK SKVEGGVFKV FLTPDGGDWN AFPCTKRVLF DGFRDV 

Retrieve as FASTA  
Remarks Complete sequence from genomic (6 introns), no EST available. Strain="RS", "RMSCC 2394" and "H538.4". Contig position: 123357-119397. Regions of the protein: 104-562 heme peroxidase domain; 894-1016 "CypX" cytochrome P450 domain