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Entry information : CzmLDS01 (lds1)
Entry ID 5344
Creation 2007-05-14 (Marcel Zamocky)
Last sequence changes 2012-04-24 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-24 (Christophe Dunand)
Peroxidase information: CzmLDS01 (lds1)
Name (synonym) CzmLDS01 (lds1)
Class Linoleate diol synthase (PGHS like)    [Orthogroup: LDS001]
Taxonomy Eukaryota Fungi Ascomycota Dothideomycetes Mycosphaerellaceae Cercospora
Organism Cercospora zeae-maydis    [TaxId: 135779 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CzmLDS01
start..stop		 S start..stop
PnoLDS01 1104 0 2..1148 28..1106
NfLDS01 1035 0 7..1156 9..1078
AorLDS01 1025 0 13..1157 15..1079
AniLDS01 1024 0 13..1152 15..1074
Gene structure Fichier Exons►


exon

Literature and cross-references CzmLDS01 (lds1)
Literature Choi Y.-E., Shim W.-B. Molecular characterization of linoleate diol synthase gene, LDS1, in maize pathogen Cercospora zeae-maydis. Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases.
Protein ref. UniProtKB:   Q3ZNB6 [Sequencing error]
DNA ref. GenBank:   AY707832 [Sequencing error] JGI genome:   scaffold_6 (1150023..1146425)
EST ref. GenBank:   FG246524.1 [3' end]  FG246523.1 [Fragment]
Protein sequence: CzmLDS01 (lds1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1159
PWM (Da):   %s   131095.2  
PI (pH):   %s   6.41
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSTLDRARTNVWQSLQQMRTLLNAVKAPLPTHTGDGSSLPQPEKDSLWKDVAEIFRDIPRQDVSDLEGLFKIIKSAKFGQPLNDKEYLMESMIAVATKMPDSFLQKKITETMVTTLWDDL
EHPPKTLLSDEFLFRQPDGSNNSYLYPDIGKAGMPYARTVAPKVKQGGVLPDPAILFDSLMAREEGKHEQHPNKISSMLFYLASIIIHDIFRTDHDDYNKSNTSSYLDLAPLYGSNWKEQ
KRMRTFKDGKIKPDCFSETRLLTFPPGVGAMLICFNRYHNYVVEQLAAINEDGRFSVDPKKPTVSRYGDDKLDKRDDDLFQTARLITCGLYINIILIGRPGVITFLYRSLMIETDYVRTI
LNLNRTDDNWQLDPRIEIPDGPPVATGNQCAAEFNLVYRWHSSVSHRDDLWTQQLFREMFPGVSPADAAKPQHMYRFLGKLKEIQEDTESRMPNERDFPALKAEKMDRIKAGPFAGRYED
DDLANLLISSIEDCANAMGPRQVPTVMKAIEILGIQQARTWRCATLNEMRKHFDLQPHETFESITDNKEVQEALKHLYDTPDQVELYPGLVVEDAKDPKLPGSGLCPSYTTSRGVLSDAV
ALVRGDRFYTSSYTPALLTNWGYQEASSDLTIDNGCVFYKLFLRALPNSFNPASTYVHYPLTVPDEMHTILKGLNKAHLYNFDKPKESRHPIVLFSAEAAKKVTEDRETFKVTWGPAMEF
LMGPRAKNFMLAGDGPKNTESRTVMEKAVYQGGSSRAMPKGNEKWLKAVRDFYEYKTTELLKEKSYKLGGTNYVDIIRDVSNMAHVHFGSELFSLPLKTKDFPRGIFTEAQMYLIMAAVF
ICVFFDLDPPKSFPLRVKAREACQQLGSLMKLQVESIKRTGRIAELLIDAIKPNDGPLGDYGVHMIAQLIRANPDMDVDELVWGNIMGTVGGMMPNQGQLFAQALDYFFTEGQSHWPEIN
RLAKLDTPEADDTLMHYLMEGARLYGETGAFRYATKDTTIVDDTGLENFPGSDKGKVTHNIKKGDVVMVNFKSASRDARAFPDPDKLDLTRDLDSYLVLGHGPHQCLGLPMTRVALTTML
KVIGRLDNLAPMPVAVGKMSEPHSVKKVMKEFVPGDGKVLPESWHYHLYLTEDWDQYFPFPTSLKVGWTGQVKDVQRRW*

Retrieve as FASTA  
Remarks Complete sequence from genomic. in NCBI files sequence on C-terminus shorter; regions: 223-614 heme peroxidase domain; 691-1125 "cypX" domain (cytochrome P450)
DNA ►
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CDS►
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