View Redoxidase 5488

Entry information : ZmRboh03(Zm00001d042961 / GRMZM2G426953 / ZmRbohA)

Entry ID	5488
Creation	2007-07-09 (Christophe Dunand)
Last sequence changes	2010-12-23 (Marie Brette (Scipio))
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2023-01-19 (Christophe Dunand)

Peroxidase information: ZmRboh03(Zm00001d042961 / GRMZM2G426953 / ZmRbohA)

Name

ZmRboh03(Zm00001d042961 / GRMZM2G426953 / ZmRbohA)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh003]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea

Organism

Zea mays [TaxId: 4577 ]

Cellular localisation

N/D

Tissue types

Flowers
Meristems
Mixed tissues
Roots
Seeds
Whole plant

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	ZmRboh03 start..stop	S start..stop
SbRboh05	1714	0	1..852	1..854
BdiRboh06	1500	0	2..852	68..907
TaRboh07-1D	1495	0	2..852	6..847
TaRboh07-1B	1489	0	3..852	7..850

Literature and cross-references ZmRboh03(Zm00001d042961 / GRMZM2G426953 / ZmRbohA)

Literature	Lin F., Jiang M. Cloning and characterization of respiratory burst oxidase homolog gene from Zea mays.
Protein ref.	UniProtKB: Q0MRQ8
DNA ref.	GenBank: AC205292 (163261..159285)
Cluster/Prediction ref.	UniGene: Zm.4257

Protein sequence: ZmRboh03(Zm00001d042961 / GRMZM2G426953 / ZmRbohA)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	852
PWM (Da):	95699.26	Transmb domain:	o302-320i433-455o483-505i670-687o
PI (pH):	9.87

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MAGYGDRRSP PLEGITVDGA SRAQSPGAGA GAGAGRLPPP PGGFARGLMK QPSRLASGVR QFASRVSMKV PEGVAGMRPG RMTRMQSSAQ MGLRGLRFLD KTSGGKEGWK AVERRFDDMA KGSGRLQKES FGKCIGMGDS KEFAGELFVA LARRRSLEPE DGITKEQLKE FWEEMTDQNF DSRLRIFFDM CDKNGDGMLT EDEVKEVIIL SASANKLAKL KGHAATYASL IMEELDPDDR GYIEIWQLET LLRGMVSAQA PEKLKRTTSS LARTMIPSRY RNPLKRHLSK TVDFIHENWK RIWLVTLWLV VNVALFVYKF EQYKRRTAFQ VMGYCVCVAK GAAEILKLNM ALILLPVCRN TLTTLRSTAL SHVIPFDDNI NFHKVIALSI AIATAIHTLA HVTCDFPRLI SCPTDKFMAT LGSNFHYKQP TYLGLLESTP GVTGILMIII MSFSFTLATH SFRRSVVKLP SPLHHLAGFN AFWYAHHLLV LAYVLLVVHS YFIFLTREWY KKTTWMYLIV PVLFYACERV IRKFRENNYH AGIVRAAIYP GDVLSIHMKK PQGFKYKSGM YLFVKCPEVS PFEWHPFSIT SAPGDDYLSV HIRTLGDWTS ELRMLFGKAC QAQVTSKKAT LTRLETTVVA DAQTEDTRFP KVYIDGPYGA PAQNYRKYDI LLLIGLGIGA TPFISILKDM LNNLKSNEEV ESIHGSEIGS FKNNGPGRAY FYWVTREQGS FEWFKGVMNE VAGSDHSNVI EMHNYLTSVY EEGDARSALI AMVQSLQRAK NGVDIVSGSK IRTHFARPNW RKVFCDLASA HKNSRIGVFY CGSPTLTKQL KDLSKEFSQT
TTTRFHFHKE NF

Retrieve as FASTA

Remarks

Complete sequence from partial genomic (chromo 3, 12 exons but 3'end is missing), 2 mRNA and 38 ESTs. Cultivar="W23", "B73".

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGCGGGGT ACGGGGACCG GCGATCGCCG CCGCTGGAGG GCATCACCGT CGACGGGGCC AGCAGGGCCC AATCGCCCGG GGCGGGTGCG GGGGCGGGGG CGGGGAGGCT GCCGCCGCCG CCAGGAGGCT TCGCGCGCGG GCTCATGAAG CAGCCGTCGC GGCTGGCGTC CGGGGTGCGG CAGTTCGCTT CGCGTGTGTC GATGAAGGTG CCCGAGGGCG TGGCCGGGAT GCGGCCGGGA CGGATGACGC GGATGCAGTC TAGCGCGCAG ATGGGGCTCC GTGGCTTGCG CTTCCTCGAC AAGACCTCCG GCGGCAAGGA GGGATGGAAG GCCGTCGAGC GCCGCTTCGA CGACATGGCC AAGGGCAGCG GACGACTCCA GAAGGAGAGC TTCGGCAAGT GCATCGGTAA GCAAAGTGCT AGTGTGCTGC TTGCTCTTGC TCCATCGAGA TTGCCTCTTC TGTCGGTTGG CCACATGCTG CCTAAGTGCT TGGTGTGATC CAGACTGGAA ATAAACCCCA AATAATCGAT AGTTGAGACG CTGATAAGAA CCGCTAGGCG TAGGCACTCA TATGACAGCA ATTGTTAATA TGTGCATCGA ATCTCTTTCC TTGCTTTTAG GAATTCTTGT TTGCTTTACT TTTTTTTTTG AGTGTTTCAA AGAGCTCTCA TGGAGTCATG GTACTGCAAT GAACTGTGCC TGTTTCCACC AAGCCTACCT AACTGAGATG AGATCCACCG TCATTCGCTC CCCAAGGGTC TTCCCAAATC ATGCTGAAAG AAAAGACTCT TCCCAAATTT TAATGAAGTT TCTCCCCAAA GTGGTCCTTT AGCACTAATC GGTCAGCTCG GACAAACAAG ATTCTAGCTA GTAACGCCAT GGGCCACCAC CATGTAATTC TATCCCATGC TTTCATCTGC CAGCAAGCGT AAAATCATTT GCTGGCGAGC TGTTCGTGTT GCTGGTGCCC GTGGCGTGAT CAATGGATGA TCCGTGGCTG ACTGACTGAT CTCATTCCCA AGGCATGGGG GACTCCAAGG AGTTTGCCGG CGAGCTGTTC GTGGCGCTGG CGCGGAGGCG GAGCCTGGAG CCGGAGGATG GCATCACCAA AGAGCAGCTC AAGGAGTTCT GGGAGGAGAT GACCGACCAG AACTTCGACT CGCGGCTGCG CATTTTCTTT GACATGTAAA GCTCCACCGC GCCCTCGTTC CCGGCCCAAC GGACATGTTC ATCGTTAGGC TACTGATAAA ACGAATTCCC CTCTGCGTCT GACTCAGGTG CGACAAGAAC GGCGATGGGA TGCTCACGGA AGATGAGGTC AAAGAGGTGA GCGACGGCAA CTTTTCGCGA TTTGGATGAC CAAATATTTA GGAGTGGACG AACTTATTAA ATTATCAACA AATTAATTTG TTTTTTAATT TGTTCCCCCC GGCAGGTTAT TATACTGAGC GCGTCAGCGA ACAAGCTAGC CAAGCTGAAG GGTCACGCCG CGACCTACGC GTCCCTGATC ATGGAAGAGC TCGACCCGGA CGACCGCGGC TACATTGAGG TCGTGCTTGC AGAAACAACA TTTTGCTTTC TGTTCGTATC CAACAGCGAT AAGTGGTACG CGTTGCTTAT ACAACCAAAC GGTGTGATGC AGATTTGGCA ACTGGAGACG TTGCTCCGGG GCATGGTGAG CGCGCAGGCT CCCGAGAAGC TGAAGCGGAC GACGTCGAGC CTGGCGCGGA CGATGATCCC GTCGCGGTAC CGGAACCCGC TGAAGCGGCA CCTGTCCAAG ACGGTGGACT TCATCCACGA GAACTGGAAG CGGATATGGC TCGTGACGCT GTGGCTGGTC GTCAACGTCG CCCTGTTCGT GTACAAGTTC GAGCAGTACA AGCGCCGAAC CGCGTTCCAG GTGATGGGCT ACTGCGTCTG CGTCGCCAAG GGTGCCGCTG AGATCCTCAA GCTCAACATG GCTCTCATCC TGCTGCCCGT CTGCCGGAAT ACGCTGACGA CGCTCAGGTC CACCGCGCTC AGCCATGTCA TACCCTTCGA TGACAACATC AACTTCCACA AGGTCATCGC GCTGTCCATC GCGATCGCCA CAGCGATCCA CACGCTCGCA CACGTGACCT GCGACTTCCC AAGGCTGATC AGCTGCCCGA CGGACAAGTT CATGGCCACC TTGGGGTCCA ACTTCCACTA CAAGCAGCCG ACTTACCTGG GCTTGCTGGA GAGCACACCC GGGGTTACCG GAATCCTCAT GATCATCATA ATGTCCTTCT CCTTCACGCT GGCAACACAT TCCTTCAGGC GGAGTGTGGT GAAGCTGCCA TCGCCGCTAC ACCACCTTGC CGGTTTCAAT GCCTTCTGGT ACGCTCACCA CCTGCTGGTC CTTGCGTATG TCCTGCTGGT GGTGCACTCC TACTTCATAT TCCTCACCAG GGAGTGGTAC AAGAAGACGG TAAACCTCGG ACACCTTGCT TTGAGATGAA ACTCATTCTC CCCTCTGCAT GTTCAGTCAG TGTTGGGAGC AGCAAAATAA CATATGGTCT CAATTGTTTA TTCAGACATG GATGTACCTG ATTGTCCCTG TCCTCTTCTA TGCCTGTGAA AGAGTCATCA GGAAATTTCG TGAGAACAAC TACCATGCGG GAATTGTGAG GGTAAGCTAT TGAACTAAAT TGATTTGGTT CATTCTGAGT TTCTGGCTGG TAATTGTTAA TCAAATTCTG TTATGTATAT GCAGGCAGCA ATTTATCCGG GAGATGTGCT CTCTATTCAC ATGAAGAAGC CACAGGGTTT CAAGTACAAG AGTGGGATGT ATCTGTTTGT TAAATGCCCA GAAGTCTCGC CCTTCGAGTG GTACCATTTC ATTAATTGTT GCATACATCT CCAAGAAATA ATTTATCTGT GGTTCTTGCT TACCGTTCTC TCATATTTGC AGGCACCCCT TCTCTATAAC TTCGGCACCA GGCGATGACT ACTTGAGTGT GCATATCCGT ACGCTGGGTG ACTGGACATC CGAACTGCGG ATGCTTTTTG GGAAGGTTAG TTTGAGGCAG CAAAAGTGTT AAGAGTTGGA AGAGTAACAA TACTGTTTTT TGAATGGCAG AATAATGTGG ACTATCAGAA ATGTATAATG TGGATTATTC GCACAGGCTT GCCAGGCACA AGTAACTTCC AAGAAGGCTA CCCTTACAAG ACTTGAAACT ACAGTTGTGG CAGACGCCCA GACAGAGGAC ACTAGGTGCT TACCTTTCTT TCATTTTTTC ACACCCTATA GTTTGATTGG TTTTAGAGAA ACTACTGCAA CTTTAAGATT TTATTAACCT GGTCAGCTTT GGTGTGTTTG CTTTAGGTTT CCCAAGGTCT ACATAGACGG GCCATACGGT GCACCAGCAC AAAATTACAG GAAATATGAC ATTCTTCTGC TTATTGGCCT TGGAATAGGA GCAACTCCTT TCATCAGCAT ACTGAAGGAT ATGTTGAACA ACCTAAAATC CAACGAAGTA ATTTCCCTTT TTAATGCATT ATTTCGATAC TGTTAAGAAA ATCAAGGATA GCTGATAACC GTACTGAGTT GATTAAACAG GAGGTGGAAA GCATCCACGG CTCTGAGATA GGCAGCTTCA AGAACAATGG TCCAGGAAGG GCTTACTTCT ACTGGGTCAC CAGAGAGCAA GGATCTTTCG AATGGTTCAA AGGAGTCATG AATGAGGTTG CAGGGAGCGA TCACAGCGTA CTGTCTCACT CTCATTTCTC TTAAATCTTA ATTACAGCGT ATGTTCATAA ACTAAGTTGA AATCTGGCTG CTGCAGAATG TTATAGAGAT GCACAATTAC CTGACCAGCG TGTATGAAGA AGGTGACGCA AGGTCAGCTC TGATTGCCAT GGTACAGTCA CTTCAGCGTG CTAAAAACGG CGTGGATATC GTCTCCGGCA GCAAGGTATA CGATAATTTC CCTTTTGCTC AACTGTAAAG TGTTTTGCAT ATGCTATCTG TTTTGGTTAA CGGAGCACTC TGTTGCAGAT TCGAACACAT TTTGCAAGAC CAAACTGGAG GAAGGTATTC TGTGATTTGG CCAGCGCACA CAAGAACTCT CGCATAGGTA AGCCACTTGT CAGTGAACAT CGAGTGACAC GATTTTCAGA TTCAGTACAA CAGTTAATGT TTTCTCTAAA AAAAAATTCA GGAGTTTTCT ATTGTGGATC
TCCGACGCTC ACAAAACAAC TGAAGGATCT TTCGAAAGAA TTCAGCCAGA CAACCACAAC CCGGTTCCAT TTCCACAAAG AGAACTTCTG A

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA