Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
434 (367) |
PWM (Da): |
46802 (40465.7) |
Transmb domain: |
i13-35o |
PI (pH):
| 6.14 (4.67) |
Peptide Signal:
| cut: 27 range:27-393 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MNDQGRLSTT RRTLLRQIGL GALGGTIAGS IGIHARAQDA KTAPQVVDAP PGHAETAAQH VPFHGRHQAG ILTPRPASGI FAAFDVVVAS LDDFERMLRL LTERAAFLTQ GGEVPARDPK
LPPADSGLLG PVIAPDNLTI TLGLGASLFD RHDWLAGLKP ARLQRMVQFP NDALDPALCH GDLSLQFCAN LPDTNIHALR DIVKNLSEFL VLRWMIEGSV PPVPPAPDGS TPSARNFLGF
RDGSANPDAN DAALMERVVW THGPDEPEWA HGGSYQAVRV IRNFVERWDR APLAEQERIF GRTKMTGAPL DAPRASEYDV PDYAADPDGA TTPPDSHIRL ANPRTPKSER NLMLRRPFNY
SRGVLRNGQL DQGLLFIAYQ ADLEAGFIAV QNQLNGEPLE EYIKPVGGGY FFALPGAAVG DYLGASLVNA ARRS
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chomo 1). Contain a Tat domain. Strain="PD1222".
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DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAACGACC AGGGCCGCCT TTCCACCACG CGCCGCACCC TTCTGAGGCA GATCGGACTG GGCGCCCTGG GCGGGACCAT CGCCGGCAGC ATTGGCATCC ACGCCCGGGC GCAGGACGCC
AAGACCGCGC CGCAGGTGGT CGATGCGCCG CCGGGCCATG CCGAGACCGC CGCCCAGCAT GTGCCGTTCC ACGGCAGGCA CCAGGCGGGG ATCCTGACCC CGCGCCCGGC CAGCGGCATC
TTTGCCGCCT TCGACGTGGT CGTCGCCTCG CTCGACGATT TCGAGCGGAT GCTGCGGCTG CTGACCGAGC GCGCCGCTTT CCTGACCCAG GGCGGCGAGG TGCCGGCCCG CGACCCCAAG
CTGCCGCCCG CCGATTCCGG CCTGCTGGGT CCGGTGATCG CACCGGACAA CCTGACGATC ACCCTGGGGC TGGGCGCCTC GCTCTTTGAC AGGCACGACT GGCTGGCGGG GCTGAAGCCG
GCGCGGCTGC AACGCATGGT GCAATTTCCC AACGACGCGC TGGACCCGGC GCTGTGCCAT GGCGACCTGT CGCTGCAATT CTGCGCCAAC CTGCCCGACA CCAACATCCA CGCCCTGCGC
GACATCGTGA AGAACCTGTC CGAATTCCTG GTGCTGCGCT GGATGATCGA AGGCTCGGTC CCGCCGGTTC CGCCCGCCCC CGATGGCTCG ACCCCCAGCG CACGGAACTT CCTGGGCTTC
CGCGACGGCT CGGCCAACCC CGATGCCAAC GATGCCGCGC TGATGGAGCG CGTGGTCTGG ACCCACGGCC CGGACGAGCC GGAATGGGCC CATGGCGGCA GCTACCAGGC CGTGCGCGTG
ATCCGCAATT TCGTTGAACG CTGGGACCGC GCGCCCCTGG CCGAGCAGGA GCGCATCTTC GGCCGCACCA AGATGACCGG CGCGCCCCTG GACGCGCCCC GGGCCAGCGA ATACGACGTG
CCCGACTACG CAGCCGACCC CGACGGCGCC ACGACGCCGC CGGATTCGCA TATCCGCCTA GCCAATCCGC GCACCCCGAA AAGCGAGCGC AACCTGATGC TGCGCCGCCC CTTCAACTAT
TCCCGCGGCG TGCTCAGGAA TGGCCAGCTC GACCAGGGCC TGCTGTTCAT CGCCTATCAG GCCGATCTGG AGGCGGGCTT CATCGCCGTG CAGAACCAGC TGAACGGCGA GCCGCTGGAG
GAATATATCA AGCCGGTGGG CGGGGGGTAT TTCTTCGCCC TGCCCGGCGC AGCCGTCGGG GACTATCTCG GCGCATCCCT TGTCAACGCA GCCAGGCGGA GCTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAACGACC AGGGCCGCCT TTCCACCACG CGCCGCACCC TTCTGAGGCA GATCGGACTG GGCGCCCTGG GCGGGACCAT CGCCGGCAGC ATTGGCATCC ACGCCCGGGC GCAGGACGCC
AAGACCGCGC CGCAGGTGGT CGATGCGCCG CCGGGCCATG CCGAGACCGC CGCCCAGCAT GTGCCGTTCC ACGGCAGGCA CCAGGCGGGG ATCCTGACCC CGCGCCCGGC CAGCGGCATC
TTTGCCGCCT TCGACGTGGT CGTCGCCTCG CTCGACGATT TCGAGCGGAT GCTGCGGCTG CTGACCGAGC GCGCCGCTTT CCTGACCCAG GGCGGCGAGG TGCCGGCCCG CGACCCCAAG
CTGCCGCCCG CCGATTCCGG CCTGCTGGGT CCGGTGATCG CACCGGACAA CCTGACGATC ACCCTGGGGC TGGGCGCCTC GCTCTTTGAC AGGCACGACT GGCTGGCGGG GCTGAAGCCG
GCGCGGCTGC AACGCATGGT GCAATTTCCC AACGACGCGC TGGACCCGGC GCTGTGCCAT GGCGACCTGT CGCTGCAATT CTGCGCCAAC CTGCCCGACA CCAACATCCA CGCCCTGCGC
GACATCGTGA AGAACCTGTC CGAATTCCTG GTGCTGCGCT GGATGATCGA AGGCTCGGTC CCGCCGGTTC CGCCCGCCCC CGATGGCTCG ACCCCCAGCG CACGGAACTT CCTGGGCTTC
CGCGACGGCT CGGCCAACCC CGATGCCAAC GATGCCGCGC TGATGGAGCG CGTGGTCTGG ACCCACGGCC CGGACGAGCC GGAATGGGCC CATGGCGGCA GCTACCAGGC CGTGCGCGTG
ATCCGCAATT TCGTTGAACG CTGGGACCGC GCGCCCCTGG CCGAGCAGGA GCGCATCTTC GGCCGCACCA AGATGACCGG CGCGCCCCTG GACGCGCCCC GGGCCAGCGA ATACGACGTG
CCCGACTACG CAGCCGACCC CGACGGCGCC ACGACGCCGC CGGATTCGCA TATCCGCCTA GCCAATCCGC GCACCCCGAA AAGCGAGCGC AACCTGATGC TGCGCCGCCC CTTCAACTAT
TCCCGCGGCG TGCTCAGGAA TGGCCAGCTC GACCAGGGCC TGCTGTTCAT CGCCTATCAG GCCGATCTGG AGGCGGGCTT CATCGCCGTG CAGAACCAGC TGAACGGCGA GCCGCTGGAG
GAATATATCA AGCCGGTGGG CGGGGGGTAT TTCTTCGCCC TGCCCGGCGC AGCCGTCGGG GACTATCTCG GCGCATCCCT TGTCAACGCA GCCAGGCGGA GCTGA
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Retrieve as FASTA
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