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Entry information : PdeDyPrx
Entry ID 5533
Creation 2007-07-13 (Dominique Koua)
Last sequence changes 2016-02-01 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-02 (Christophe Dunand)
Peroxidase information: PdeDyPrx
Name PdeDyPrx
Class DyP-type peroxidase A    [Orthogroup: DyPrxA001]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Rhodobacteraceae Paracoccus
Organism Paracoccus denitrificans    [TaxId: 266 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PdeDyPrx
start..stop		 S start..stop
RruDyPrx 525 0 11..432 19..443
PfDyPrx01_PfO1 511 0 1..432 1..427
EcoDyPrx01_536 438 1.18e-152 10..428 13..421
SsoDyPrx01 436 7.69e-152 10..428 13..421
Literature and cross-references PdeDyPrx
Literature Copeland A. et al., Complete sequence of chromosome 1 of Paracoccus denitrificans PD1222. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
Protein ref. GenBank:   ABL69832.1 UniProtKB:   A1B2T8
DNA ref. GenBank:   CP000489.1 (1723472..1724776)
Protein sequence: PdeDyPrx
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   434 (367)
PWM (Da):   %s   46802 (40465.7) Transmb domain:   %s   i13-35o
PI (pH):   %s   6.14 (4.67) Peptide Signal:   %s   cut: 27 range:27-393
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MNDQGRLSTT RRTLLRQIGL GALGGTIAGS IGIHARAQDA KTAPQVVDAP PGHAETAAQH VPFHGRHQAG ILTPRPASGI FAAFDVVVAS LDDFERMLRL LTERAAFLTQ GGEVPARDPK  LPPADSGLLG PVIAPDNLTI TLGLGASLFD RHDWLAGLKP ARLQRMVQFP NDALDPALCH GDLSLQFCAN LPDTNIHALR DIVKNLSEFL VLRWMIEGSV PPVPPAPDGS TPSARNFLGF  RDGSANPDAN DAALMERVVW THGPDEPEWA HGGSYQAVRV IRNFVERWDR APLAEQERIF GRTKMTGAPL DAPRASEYDV PDYAADPDGA TTPPDSHIRL ANPRTPKSER NLMLRRPFNY 
SRGVLRNGQL DQGLLFIAYQ ADLEAGFIAV QNQLNGEPLE EYIKPVGGGY FFALPGAAVG DYLGASLVNA ARRS 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chomo 1). Contain a Tat domain. Strain="PD1222".
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAACGACC AGGGCCGCCT TTCCACCACG CGCCGCACCC TTCTGAGGCA GATCGGACTG GGCGCCCTGG GCGGGACCAT CGCCGGCAGC ATTGGCATCC ACGCCCGGGC GCAGGACGCC  AAGACCGCGC CGCAGGTGGT CGATGCGCCG CCGGGCCATG CCGAGACCGC CGCCCAGCAT GTGCCGTTCC ACGGCAGGCA CCAGGCGGGG ATCCTGACCC CGCGCCCGGC CAGCGGCATC  TTTGCCGCCT TCGACGTGGT CGTCGCCTCG CTCGACGATT TCGAGCGGAT GCTGCGGCTG CTGACCGAGC GCGCCGCTTT CCTGACCCAG GGCGGCGAGG TGCCGGCCCG CGACCCCAAG  CTGCCGCCCG CCGATTCCGG CCTGCTGGGT CCGGTGATCG CACCGGACAA CCTGACGATC ACCCTGGGGC TGGGCGCCTC GCTCTTTGAC AGGCACGACT GGCTGGCGGG GCTGAAGCCG  GCGCGGCTGC AACGCATGGT GCAATTTCCC AACGACGCGC TGGACCCGGC GCTGTGCCAT GGCGACCTGT CGCTGCAATT CTGCGCCAAC CTGCCCGACA CCAACATCCA CGCCCTGCGC  GACATCGTGA AGAACCTGTC CGAATTCCTG GTGCTGCGCT GGATGATCGA AGGCTCGGTC CCGCCGGTTC CGCCCGCCCC CGATGGCTCG ACCCCCAGCG CACGGAACTT CCTGGGCTTC  CGCGACGGCT CGGCCAACCC CGATGCCAAC GATGCCGCGC TGATGGAGCG CGTGGTCTGG ACCCACGGCC CGGACGAGCC GGAATGGGCC CATGGCGGCA GCTACCAGGC CGTGCGCGTG  ATCCGCAATT TCGTTGAACG CTGGGACCGC GCGCCCCTGG CCGAGCAGGA GCGCATCTTC GGCCGCACCA AGATGACCGG CGCGCCCCTG GACGCGCCCC GGGCCAGCGA ATACGACGTG  CCCGACTACG CAGCCGACCC CGACGGCGCC ACGACGCCGC CGGATTCGCA TATCCGCCTA GCCAATCCGC GCACCCCGAA AAGCGAGCGC AACCTGATGC TGCGCCGCCC CTTCAACTAT  TCCCGCGGCG TGCTCAGGAA TGGCCAGCTC GACCAGGGCC TGCTGTTCAT CGCCTATCAG GCCGATCTGG AGGCGGGCTT CATCGCCGTG CAGAACCAGC TGAACGGCGA GCCGCTGGAG 
GAATATATCA AGCCGGTGGG CGGGGGGTAT TTCTTCGCCC TGCCCGGCGC AGCCGTCGGG GACTATCTCG GCGCATCCCT TGTCAACGCA GCCAGGCGGA GCTGA 

Retrieve as FASTA  
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAACGACC AGGGCCGCCT TTCCACCACG CGCCGCACCC TTCTGAGGCA GATCGGACTG GGCGCCCTGG GCGGGACCAT CGCCGGCAGC ATTGGCATCC ACGCCCGGGC GCAGGACGCC  AAGACCGCGC CGCAGGTGGT CGATGCGCCG CCGGGCCATG CCGAGACCGC CGCCCAGCAT GTGCCGTTCC ACGGCAGGCA CCAGGCGGGG ATCCTGACCC CGCGCCCGGC CAGCGGCATC  TTTGCCGCCT TCGACGTGGT CGTCGCCTCG CTCGACGATT TCGAGCGGAT GCTGCGGCTG CTGACCGAGC GCGCCGCTTT CCTGACCCAG GGCGGCGAGG TGCCGGCCCG CGACCCCAAG  CTGCCGCCCG CCGATTCCGG CCTGCTGGGT CCGGTGATCG CACCGGACAA CCTGACGATC ACCCTGGGGC TGGGCGCCTC GCTCTTTGAC AGGCACGACT GGCTGGCGGG GCTGAAGCCG  GCGCGGCTGC AACGCATGGT GCAATTTCCC AACGACGCGC TGGACCCGGC GCTGTGCCAT GGCGACCTGT CGCTGCAATT CTGCGCCAAC CTGCCCGACA CCAACATCCA CGCCCTGCGC  GACATCGTGA AGAACCTGTC CGAATTCCTG GTGCTGCGCT GGATGATCGA AGGCTCGGTC CCGCCGGTTC CGCCCGCCCC CGATGGCTCG ACCCCCAGCG CACGGAACTT CCTGGGCTTC  CGCGACGGCT CGGCCAACCC CGATGCCAAC GATGCCGCGC TGATGGAGCG CGTGGTCTGG ACCCACGGCC CGGACGAGCC GGAATGGGCC CATGGCGGCA GCTACCAGGC CGTGCGCGTG  ATCCGCAATT TCGTTGAACG CTGGGACCGC GCGCCCCTGG CCGAGCAGGA GCGCATCTTC GGCCGCACCA AGATGACCGG CGCGCCCCTG GACGCGCCCC GGGCCAGCGA ATACGACGTG  CCCGACTACG CAGCCGACCC CGACGGCGCC ACGACGCCGC CGGATTCGCA TATCCGCCTA GCCAATCCGC GCACCCCGAA AAGCGAGCGC AACCTGATGC TGCGCCGCCC CTTCAACTAT  TCCCGCGGCG TGCTCAGGAA TGGCCAGCTC GACCAGGGCC TGCTGTTCAT CGCCTATCAG GCCGATCTGG AGGCGGGCTT CATCGCCGTG CAGAACCAGC TGAACGGCGA GCCGCTGGAG 
GAATATATCA AGCCGGTGGG CGGGGGGTAT TTCTTCGCCC TGCCCGGCGC AGCCGTCGGG GACTATCTCG GCGCATCCCT TGTCAACGCA GCCAGGCGGA GCTGA 

Retrieve as FASTA