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Entry information : OsiRboh04 (OsiRbohD)
Entry ID 5563
Creation 2007-07-23 (Christophe Dunand)
Last sequence changes 2007-07-23 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-08-13 (Qiang Li)
Peroxidase information: OsiRboh04 (OsiRbohD)
Name (synonym) OsiRboh04 (OsiRbohD)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa (indica cultivar-group)    [TaxId: 39946 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsiRboh04
start..stop		 S start..stop
OsRboh08 1934 0 1..938 1..936
BdiRboh02 1642 0 1..938 1..924
TaRboh10-1D 1637 0 18..938 14..918
TaRboh10-1B 1632 0 18..938 114..1018
Literature and cross-references OsiRboh04 (OsiRbohD)
Literature Li R., Fan W., Zhang J., Zheng H., Zhang Y., Li J., Zhao M., McDermott J., Samudrala R., Kristiansen K., Wang J., Wong G.K.-S. Re-annotation of the rice genome(s) by selective pre-masking of intergenic transposable elements. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
Protein ref. GenPept:   EAY81194 [Incorrect splicing] UniProtKB_Uniparc:   A2ZF10 [Incorrect splicing]
DNA ref. GenBank:   CM000136 (16380394..16387116)
EST ref. GenBank:   CB630821 [5' end]  CB630822 [3' end]
Protein sequence: OsiRboh04 (OsiRbohD)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   938
PWM (Da):   %s   105067.8 Transmb domain:   %s   o383-405i526-548o568-590i752-769o
PI (pH):   %s   9.49
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MHHTRAGAAD GAGGGGEDIV EAGAEAPPPQ RERLVPHSGP LSKRSGMRKS ARFAESVSAP LSAPSGVAAA RRAAAAANDD DEEDYVEITL DVRDDSVAVH SVKPAGGGGE DSDVTLLART  LEKRSSSFGH SVIRNASSRI KQVSQELRRL ASVNRRGGGG GAGGPRFDRS KSAAAHALKG LKFISRADGG AGWPAVEKRF DDLAKDGLLP RSKFGQCIGM KELEFAGELF DALARRRNIS  GDSISKAELL EFWDQISDTS FDSRLQTFFD MVDKNADGRI TEEEVKEIIT LSASANKLSK VQEQSEEYAR LIMEELDPSN LGYIELYNLE MLLLQAPSQS VRIGTTNSRN LSQMLSQNLR  PTAEPNPLRR WWRRASYFLE DNWRRVWVLL LWLAICAGLF TYKFIQYRHR AVFHVMGYCV CVAKGGAETL KFNMALILLP VCRNTVTWIR NRAAVARVVP FDDNLNFHKV IAVGITVGAG  LHVISHLTCD FPRLLHATDA EYEPMKRFFG DTRPPNYWWF VKGTEGWTGL VMLVLMAVAF TLATPWFRRG RLRLPRPLNR LTGFNAFWYS HHCFVIVYAL LIVHGYYLFL TKDWYKKTTW  MYLAVPMFLY ACERLTRALR SSVRPVKILK VAVYPGNVLS LHFSKPQGFK YKSGQYIFVN CAAVSPFQWH PFSITSAPQD DYVSVHIRTL GDWTRELKNV FSRVCRPPTE GKSGLLRAEY  DRDGAMTNPS FPKVLIDGPY GAPAQDYKQY DIVLLVGLGI GATPMISIIK DIINNMRQLD GDLEDGDGND NSVSSAAAAF KTRRAYFYWV TREQGSFEWF RGVMDEVAET DKKGVIELHN 
YCTSVYEEGD ARSALIAMLQ SLNHAKHGVD VVSGTRVKTH FARPNWRNVY KRIALNHRDQ RVGVFYCGAP VLTKELRELA QDFSRKTSTK FDFHKENF 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 11, 8 introns). Cultivar="93-11", "Guang Lu Ai 4" and "IR36". Uncorrect splicing prediction corrected by the PeroxiBase Team based on sequence homologies with ESTs and other Rboh sequences.