Entry information : OsRboh01(LOC_Os01g25820 / OsNox01 / OsRbohB)
Entry ID 5564
Creation 2007-07-18 (Christophe Dunand)
Last sequence changes 2007-07-18 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2022-02-22 (Christophe Dunand)
Peroxidase information: OsRboh01(LOC_Os01g25820 / OsNox01 / OsRbohB)
Name OsRboh01(LOC_Os01g25820 / OsNox01 / OsRbohB)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation N/D
Tissue types Flowers
Inflorescences
Leaves
Roots
Stems
Vegetative tissues
Whole plant
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsRboh01
start..stop
S start..stop
ZmRboh13 1606 0 11..905 6..897
TaRboh05-1B 1582 0 1..905 3..900
BdiRboh08 1580 0 1..905 3..901
TaRboh05-1D 1579 0 1..905 3..900
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '5564' 'complement(join(14604499..14604608,14604692..14605203,14605339..14605418,14605597..14605699,14605792..14605907,14606088..14606180,14606289..14606675,14607690..14608124,14608198..14608311,14608405..14608453,14608684..14608843,14608941..14609499))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 14608941..14609499 557 N° 2 14608684..14608843 158 N° 3 14608405..14608453 47 N° 4 14608198..14608311 112
N° 5 14607690..14608124 433 N° 6 14606289..14606675 385 N° 7 14606088..14606180 91 N° 8 14605792..14605907 114
N° 9 14605597..14605699 101 N° 10 14605339..14605418 78 N° 11 14604692..14605203 510 N° 12 14604499..14604608 108
complement(join(14604499..14604608,14604692..14605203,14605339..14605418,1460559 7..14605699,14605792..14605907,14606088..14606180,14606289..14606675,14607690..1 4608124,14608198..14608311,14608405..14608453,14608684..14608843,14608941..14609 499))


exon

Literature and cross-references OsRboh01(LOC_Os01g25820 / OsNox01 / OsRbohB)
Literature Sasaki T.,et al., The genome sequence and structure of rice chromosome 1. Nature 420:312-316(2002).
Protein ref. UniProtKB:   Q5ZAJ0 UniProtKB_Uniparc:   A2ZT24 [Incorrect splicing]
DNA ref. GenBank:   NC_008394.1 (14609499..14604502)
mRNA ref. GenBank:   AK065117.1
Cluster/Prediction ref. UniGene:   Os.10600
Protein sequence: OsRboh01(LOC_Os01g25820 / OsNox01 / OsRbohB)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   905
PWM (Da):   %s   101547.27 Transmb domain:   %s   o356-375i496-518o538-560i721-738o
PI (pH):   %s   9.74
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MADLEAGMVAAATDQGNSTRSQDDAATLIPNSGNLGSSNRSTKTARFKDDDELVEITLDVQRDSVAIQEVRGVDEGGSGHGTGFDGLPLVSPSSKSGKLTSKLRQVTNGLKMKSSSRKAP
SPQAQQSAKRVRKRLDRTKSSAAVALKGLQFVTAKVGNDGWAAVEKRFNQLQVDGVLLRSRFGKCI
GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDM
VDKNADGRLTAEEVK
IIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQSPSEAAARSTTTHSSKLSKALSMKLASNKEMSPVRHYWQQFMYFLEENWKRSWVMTL
WISICIALFIWKFIQYRNRAVFGIMGYCVTTAKGAAETLKFNMALVLLPVCRNTITWIRSKTQVGAVVPFNDNINFHK
VIAAGVAVGVALHAGAHLTCDFPRLLHASDAQYELMKPFFGE
KRPPNYWWFVKGTEGWTGVVMVVLMAIAFTLAQPWFRRNKLKDSNPLKKMTGFNAFWFTHHLFVIVYTLLFVHGTCLYLSRKWYKKT
TWMYLAVPVVLYVSERILRLFRSHDAVGIQKVA
VYPGNVLALYMSKPPGFRYRSGQYIFIKCTAVSPYE
WHPFSITSAPGDDYLSVHIRTRGDWTSRLRTVFSACRPPTEGESGLLRADLSKGITDEKARFPKLLVDGPYGAPAQDYREYDVL
LLIGLGIGATPLISIVKDVLNHIQGEGSVGTTEPESSSKAKKKPFMTKRAYFYWVTREEGSFEWFRGVMNEVSEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELQHAKKGVDILSGT
SVKTHFARPNWRSVFKKVAVSHENQR
GVFYCGEPVLVPQLRQLSADFTHKTNTRFDFHKENF

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, 11 introns), 6 mRNA and 125 ESTs. Cultivar="Nipponbare". TGI accessions, TC285125 and TC332431 (frame shift) are compiles from Indica and Japonica. Two SwissProt/TREMBL accessions: Q5ZAJ0 and A2ZT24 ( extra sequence CWSYTFYGKKM not present in ESTs).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGACCTGGAAGCAGGCATGGTTGCTGCTGCCACAGACCAGGGCAATTCAACAAGGTCACAAGATGACGCAGCCACACTGATCCCGAACAGTGGCAATCTGGGCTCGAGCAACAGG
AGCACCAAGACGGCCAGGTTCAAGGACGACGACGAGCTGGTCGAGATCACCCTCGACGTGCAGCGCGATTCGGTGGCAATCCAAGAAGTGAGAGGGGTGGATGAGGGTGGCTCCGGGCAC
GGTACCGGGTTCGACGGCCTGCCACTGGTGTCACCCTCGTCGAAGAGCGGAAAGCTGACGTCAAAGCTCAGGCAGGTGACCAATGGGCTCAAGATGAAGAGCTCCAGCAGGAAGGCGCCA
TCCCCGCAGGCGCAGCAGTCTGCGAAGAGGGTGAGGAAGAGGCTGGACAGGACCAAGAGCAGCGCCGCCGTGGCGCTCAAAGGATTGCAGTTTGTGACTGCAAAGGTTGGCAATGACGGC
TGGGCCGCGGTGGAGAAGCGGTTCAATCAGCTGCAGGTGGATGGTGTGCTGCTCCGTTCAAGATTTGGGAAATGCATTG
GTAAATTTTTTTTTTCAGAAGTTGAGCTGAATTTGAATTGT
TCATACATCTGTTAGGAGAAATGGTGTTTATTCCATTATTTGGATTGATTGTGCAGGAGAATGGATGGGTCCGACGAGTTTGCGGTGCAAATGTTCGATTCTCTGGCGAGGAAGAGAGGG
ATAGTGAAGCAGGTGCTCACTAAGGACGAGCTCAAAGATTTCTATGAGCAATTGACTGATCAGGGGTTTGACAATCGTCTTCGGACATTCTTTGACAT
GTTAGTACTCTCTGAAAACACT
TCTAGTGTTGTCATGTTTCCTTTCTGTACTATTATAGGCATAAATATATTTCATGTGGTTAATTTGCCAAATCAAATTTCCACCACAGAGTAGCTCAATATCTTGCATAGAATTCAAGCA
AGTGAGCGACAAGCTTTTCATGCTTCTGTTTTGCTAACTGCTAAGCTATTCATTGTAGCACTTAACAATGTTCATTCTTGTTGTGCAGGGGGTTGACAAGAACGCTGATGGAAGGCTCAC
AGCAGAAGAGGTTAAGGAG
GTAAGTCAGAAAACACAAAACCGAAAAAAAATATAACAATTTCTATATGTTCTGTGTTTAAATGGTATTAAATGGATGATTATGCTTTTGCAGATATTATT
GCCCTTAGTGCATCAGCAAACAAACTTTCCAAGATCAAGGAGCGAGCTGATGAGTACACAGCACTCATTATGGAAGAGCTTGACCCTACAAACTTGGGATACATCGAG
GTTTGTCCAATT
CCAAGCATCAAAGTAATATTGTGCACAACCTATGACCTAACCGCATTAATAATTTTGACAGATATGGAGGACTTGGAAGCACTATTGCTTCAGTCACCATCTGAAGCTGCTGCAAGATCA
ACAACGACGCACAGCTCCAAACTTAGCAAAGCTCTTAGCATGAAGCTTGCGTCTAACAAAGAAATGAGCCCAGTTCGTCATTACTGGCAGCAGTTCATGTACTTCCTTGAAGAGAATTGG
AAGCGCAGTTGGGTTATGACTCTGTGGATCTCAATCTGCATTGCCCTTTTCATTTGGAAGTTCATTCAGTACCGTAATCGAGCCGTATTCGGCATCATGGGTTATTGTGTGACCACTGCA
AAGGGTGCTGCAGAGACCCTCAAATTCAACATGGCTTTGGTCCTACTTCCTGTCTGCAGAAATACAATCACATGGATTCGGTCAAAGACACAGGTTGGAGCTGTTGTACCCTTCAACGAC
AATATAAACTTTCATAAG
GTAAAATTATGTTGATTCAATCAATATTGAACTGATGGATTTTACCGTGTTGTGAATATCATCCAGTCCATTTTGCGTAGTGCTTTCCATAATCAAGTAAAG
TCAATATTTTTTTAAGATAATGGAAGCTTTATTGAACTCAGCCAATGACATCAAGATGATAGAACTGTACTAAGAACACTCTCGACCTCTGCATAACTAAGATGCACACAGTCAAAACAC
ACCAACACTAGAATTTTTTTTAAAGAAAAAACTAAACAAAAGATAGGAGGGATTAAGGGCCATCAATCCATAGACTAGATCGCCACCCACGCTCCTAAGTAAAAAAACCCCCTCGCTACC
TGCTCCAATTGTGACATGCCACAGCAATAAAATTATGCAGACCCGACTTCCGAAGAATATCCCAAGAACGGAGCCAATGAGTAATCAAAGAGATAACCTGGAAAGGAGAGTCAATCTTTA
TGTTATCAAAAACCACATCATTACTGCCTAGCCACAATGACCAGCATATAGCAGCCGCTCCTAATAGGACTAAAGGTCTCAAATATTTAGATAAACACGAAAGCAAACTCGCAAACATAT
GTGAAACACTATGGGGGCAGACATAGGTTTGAAACTATTTGGATTAAAGACCAAATAGAATGAGCAAGACGACATTGGAAGAGTAAATGTTTAATCATCTCTTCTTTATGACAAAAGCAG
CATATCTTGCTACCTTGCTAATTACACTTGGCAAGATTATCCTTTGTTAGTACTACACGTCTACACCACGGCGTAAGCACCAAAGAAAGATCTTGACTTTTAGAGGACCCTTTAAATTCT
AAAGTCGTTTATTTAGTAACATATGAGTAACACATTAAACCTGTTCATCTGGTACATTTTTTCAATAATGGAAATTAGCATATCCTCTACATCAAAAAATGTGTCCGGCCATATAGTTGA
GAACTAGGCAAAAAAATATGAGTTGTGAGACTAATATCGACTTTACATAATCTATGATTTACTACTGTGCAGGTGTCATAGCCGCAGGTGTTGCAGTTGGTGTTGCTTTGCATGCAGGTG
CTCATCTGACATGTGATTTTCCCCGGCTGCTCCATGCGAGTGATGCACAATATGAACTAATGAAGCCCTTCTTTGGGGAGAAGAGGCCACCAAATTACTGGTGGTTTGTAAAGGGAACTG
AAGGCTGGACAGGTGTGGTCATGGTGGTGCTCATGGCAATAGCATTTACATTAGCCCAACCATGGTTCCGACGTAACAAGCTCAAGGACTCCAATCCCCTCAAAAAAATGACTGGCTTCA
ATGCCTTCTGGTTTACCCACCACCTGTTTGTCATTGTGTACACTTTGCTCTTTGTCCATGGAACGTGCTTGTATCTAAGCAGGAAATGGTACAAGAAGACG
GTAAAAGTCTATACCCTGA
ACACACAAGAAATCCCAATGATCATAGTTGGTACCTTCTTTGTGAGGAGATCATAACTGATACTTATGGTTCATTTTTATCATTTTCAGACACATGGATGTACCTCGCTGTTCCTGTTGT
CCTGTATGTAAGTGAGCGTATTCTTCGGTTGTTTAGGAGCCATGATGCAGTTGGGATTCAGAAG
GTACCATCAATCAAATCTCTTTCCTCAACTTACATATTACTACTATCCATCGCCAT
CCACATCTTTCCTTTTTTTATGTTGTATTTTATTTAAAGGGTTTGAACTGAAACTAGCCTTGGAATGTCTGGAAGCTCTGAATCCGTCTTTTTTTTTTGGGTTTAACATCTCTGCTTTCA
ACAGGTGTTGCAGTGTATCCCGGGAATGTATTGGCTCTTTATATGTCGAAGCCACCTGGTTTCAGATACCGTAGTGGGCAGTACATCTTCATAAAATGCACTGCTGTGTCTCCATATGAA
TG
GTGCTGGTCTTACACATTTTATGGAAAGAAAATGTATTATTTTGAAATAAAGTCCGCAGATAACTAAAAGAGCAATACTTTGTCTGTTACAGGCGCATCCATTTTCCATAACATCAGC
ACCTGGAGATGATTATCTTAGTGTTCATATTCGCACAAGGGGTGATTGGACTTCACGGCTTAGAACTGTTTTCTCTGAG
GTAATTGAACCAACTGCCTTTTATTTTTTTTGCTTTGTTCT
ATAGATAAACTCCTAAGAAACATGACTTACGAACTTTGTAAGCACCTGAATTGCATTGTCTTTCATTTGTCATATCCAATTTATCTGCTTGATGGATTCAATCGACAACAAGTATGATAA
CAAAATCTTTGAACCAGGCGCATGCCGACCCCCCACTGAGGGAGAAAGTGGACTACTTAGAGCTGACCTTTCCAAGGGAATAACGGACGAAAAAGCAAGGTGCAAAGGACTTCATTTGAT
TTGTTTGCGAAAAGCAGAAATGCATTATATATCTTGCTTCATCTCATGGTAGGACTTTCCGTTATCTAAAGAAAAATCTTCCGTCTAACGATAATTCTGCTTTACATGCACTAGATATTC
CCAAAACTTTTGGTCGATGGACCGTATGGTGCACCGGCACAAGATTACCGTGAATACGATGTGCTACTTCTCATCGGGCTGGGCATCGGAGCCACCCCTTTGATTAGCATTGTGAAGGAC
GTGCTTAACCACATTCAAGGTGAGGGATCAGTTGGAACCACGGAGCCGGAGAGCAGCAGCAAGGCGAAGAAGAAACCTTTCATGACGAAGAGAGCCTACTTCTACTGGGTGACGAGAGAG
GAGGGCTCGTTTGAGTGGTTCAGAGGCGTCATGAACGAGGTGTCTGAGAAGGACAAGGATGGAGTCATTGAGCTCCATAACCACTGCTCAAGCGTGTACCAGGAAGGCGATGCTCGTTCT
GCTCTCATTGTCATGCTCCAAGAACTTCAGCATGCGAAGAAGGGCGTCGATATCTTGTCGGGAACTAGTGTGAAGACCCATTTCGCACGACCTAATTGGCGAAGCGTCTTCAAGAAGGTT
GCGGTCAGCCATGAGAACCAGCGCGTCG
GTATGTTCTTCTTCCTGTCCTTTCAAATCCAGTAGTAGGAATGTCCATGATCCATTGCATATTAACCCTGTATATTTCTTCAGGTGTGTGTT
CTACTGTGGTGAGCCTGTGCTGGTTCCCCAACTAAGGCAGTTGTCAGCAGATTTCACCCACAAGACAAACACAAGATTTGATTTCCACAAGGAGAACTTCTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGACCTGGAAGCAGGCATGGTTGCTGCTGCCACAGACCAGGGCAATTCAACAAGGTCACAAGATGACGCAGCCACACTGATCCCGAACAGTGGCAATCTGGGCTCGAGCAACAGG
AGCACCAAGACGGCCAGGTTCAAGGACGACGACGAGCTGGTCGAGATCACCCTCGACGTGCAGCGCGATTCGGTGGCAATCCAAGAAGTGAGAGGGGTGGATGAGGGTGGCTCCGGGCAC
GGTACCGGGTTCGACGGCCTGCCACTGGTGTCACCCTCGTCGAAGAGCGGAAAGCTGACGTCAAAGCTCAGGCAGGTGACCAATGGGCTCAAGATGAAGAGCTCCAGCAGGAAGGCGCCA
TCCCCGCAGGCGCAGCAGTCTGCGAAGAGGGTGAGGAAGAGGCTGGACAGGACCAAGAGCAGCGCCGCCGTGGCGCTCAAAGGATTGCAGTTTGTGACTGCAAAGGTTGGCAATGACGGC
TGGGCCGCGGTGGAGAAGCGGTTCAATCAGCTGCAGGTGGATGGTGTGCTGCTCCGTTCAAGATTTGGGAAATGCATTG
GAATGGATGGGTCCGACGAGTTTGCGGTGCAAATGTTCGAT
TCTCTGGCGAGGAAGAGAGGGATAGTGAAGCAGGTGCTCACTAAGGACGAGCTCAAAGATTTCTATGAGCAATTGACTGATCAGGGGTTTGACAATCGTCTTCGGACATTCTTTGACAT
G
GTTGACAAGAACGCTGATGGAAGGCTCACAGCAGAAGAGGTTAAGGAG
ATTATTGCCCTTAGTGCATCAGCAAACAAACTTTCCAAGATCAAGGAGCGAGCTGATGAGTACACAGCACTC
ATTATGGAAGAGCTTGACCCTACAAACTTGGGATACATCGAG
ATGGAGGACTTGGAAGCACTATTGCTTCAGTCACCATCTGAAGCTGCTGCAAGATCAACAACGACGCACAGCTCCAAA
CTTAGCAAAGCTCTTAGCATGAAGCTTGCGTCTAACAAAGAAATGAGCCCAGTTCGTCATTACTGGCAGCAGTTCATGTACTTCCTTGAAGAGAATTGGAAGCGCAGTTGGGTTATGACT
CTGTGGATCTCAATCTGCATTGCCCTTTTCATTTGGAAGTTCATTCAGTACCGTAATCGAGCCGTATTCGGCATCATGGGTTATTGTGTGACCACTGCAAAGGGTGCTGCAGAGACCCTC
AAATTCAACATGGCTTTGGTCCTACTTCCTGTCTGCAGAAATACAATCACATGGATTCGGTCAAAGACACAGGTTGGAGCTGTTGTACCCTTCAACGACAATATAAACTTTCATAAG
GTC
ATAGCCGCAGGTGTTGCAGTTGGTGTTGCTTTGCATGCAGGTGCTCATCTGACATGTGATTTTCCCCGGCTGCTCCATGCGAGTGATGCACAATATGAACTAATGAAGCCCTTCTTTGGG
GAGAAGAGGCCACCAAATTACTGGTGGTTTGTAAAGGGAACTGAAGGCTGGACAGGTGTGGTCATGGTGGTGCTCATGGCAATAGCATTTACATTAGCCCAACCATGGTTCCGACGTAAC
AAGCTCAAGGACTCCAATCCCCTCAAAAAAATGACTGGCTTCAATGCCTTCTGGTTTACCCACCACCTGTTTGTCATTGTGTACACTTTGCTCTTTGTCCATGGAACGTGCTTGTATCTA
AGCAGGAAATGGTACAAGAAGACG
ACATGGATGTACCTCGCTGTTCCTGTTGTCCTGTATGTAAGTGAGCGTATTCTTCGGTTGTTTAGGAGCCATGATGCAGTTGGGATTCAGAAGGTT
GCAGTGTATCCCGGGAATGTATTGGCTCTTTATATGTCGAAGCCACCTGGTTTCAGATACCGTAGTGGGCAGTACATCTTCATAAAATGCACTGCTGTGTCTCCATATGAATG
GCATCCA
TTTTCCATAACATCAGCACCTGGAGATGATTATCTTAGTGTTCATATTCGCACAAGGGGTGATTGGACTTCACGGCTTAGAACTGTTTTCTCTGAG
GCATGCCGACCCCCCACTGAGGGA
GAAAGTGGACTACTTAGAGCTGACCTTTCCAAGGGAATAACGGACGAAAAAGCAAG
ATTCCCAAAACTTTTGGTCGATGGACCGTATGGTGCACCGGCACAAGATTACCGTGAATACGAT
GTGCTACTTCTCATCGGGCTGGGCATCGGAGCCACCCCTTTGATTAGCATTGTGAAGGACGTGCTTAACCACATTCAAGGTGAGGGATCAGTTGGAACCACGGAGCCGGAGAGCAGCAGC
AAGGCGAAGAAGAAACCTTTCATGACGAAGAGAGCCTACTTCTACTGGGTGACGAGAGAGGAGGGCTCGTTTGAGTGGTTCAGAGGCGTCATGAACGAGGTGTCTGAGAAGGACAAGGAT
GGAGTCATTGAGCTCCATAACCACTGCTCAAGCGTGTACCAGGAAGGCGATGCTCGTTCTGCTCTCATTGTCATGCTCCAAGAACTTCAGCATGCGAAGAAGGGCGTCGATATCTTGTCG
GGAACTAGTGTGAAGACCCATTTCGCACGACCTAATTGGCGAAGCGTCTTCAAGAAGGTTGCGGTCAGCCATGAGAACCAGCGCGTCG
GTGTGTTCTACTGTGGTGAGCCTGTGCTGGTT
CCCCAACTAAGGCAGTTGTCAGCAGATTTCACCCACAAGACAAACACAAGATTTGATTTCCACAAGGAGAACTTCTAA

Retrieve as FASTA