Entry information : OsRboh02(LOC_Os01g53294 / OsNox02 / RbohAOsp / OsRbohA)
Entry ID 5567
Creation 2007-07-19 (Christophe Dunand)
Last sequence changes 2010-08-04 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2022-02-28 (Christophe Dunand)
Peroxidase information: OsRboh02(LOC_Os01g53294 / OsNox02 / RbohAOsp / OsRbohA)
Name OsRboh02(LOC_Os01g53294 / OsNox02 / RbohAOsp / OsRbohA)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation N/D
Tissue types Callus
Inflorescences
Roots
Stems
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsRboh02
start..stop
S start..stop
ZmRboh05 1727 0 1..943 1..942
SbRboh03 1726 0 1..943 1..944
OsRboh05 1680 0 11..943 19..951
SbRboh09 1655 0 11..943 18..957
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 30615335..30615980 646 N° 2 30616072..30616231 160 N° 3 30616350..30616398 49 N° 4 30617561..30617674 114
N° 5 30623848..30624270 423 N° 6 30624523..30624906 384 N° 7 30624991..30625086 96 N° 8 30625161..30625276 116
N° 9 30625431..30625598 168 N° 10 30625685..30625844 160 N° 11 30625999..30626196 198 N° 12 30626304..30626432 129
N° 13 30626595..30626673 79 N° 14 30627010..30627119 110  
join(30615335..30615980,30616072..30616231,30616350..30616398,30617561..30617674 ,30623848..30624270,30624523..30624906,30624991..30625086,30625161..30625276,306 25431..30625598,30625685..30625844,30625999..30626196,30626304..30626432,3062659 5..30626673,30627010..30627119)


exon

Literature and cross-references OsRboh02(LOC_Os01g53294 / OsNox02 / RbohAOsp / OsRbohA)
Cluster/Prediction ref. UniGene:   Os.3427
Protein sequence: OsRboh02(LOC_Os01g53294 / OsNox02 / RbohAOsp / OsRbohA)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   943
PWM (Da):   %s   106043.57 Transmb domain:   %s   o381-398i520-542o567-589i741-758o
PI (pH):   %s   9.57
Sequence 984
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRGGASSGPQRWGSAGTTPRSLSTGSSPRGSDDRSSDDGEELVEVTLDLQDDDTIVLRSVEPAAAAAAGVGAGAGAASARGELTGGPSSSSSRSRSPSIRRSSSHRLLQFSQELKAEAMARARQFSQDLTKRFGRSHSRSEAQAPSGLESALAARAARRQRAQLDRTRSGAHKALRGLRFISSNKANNAWMEVQANFDRLARDGYLSRSDFAECIGMTESKEFALELFDTLSRRRQMKVDTINKDELREIWQQITDNSFDSRLQIFFEMVDKNADGRITEAEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPEGLGYIELWQLETLLLQKDTYMNYSQALSYTSQALSQNLAGLRKKSSIRKISTSLSYYFEDNWKRLWVLALWIGIMAGLFTWKFMQYRNRYVFDVMGYCVTTAKGAAETLKLNMAIILLPVCRNTITWLRSTRAARALPFDDNINFHKTIAAAIVVGIILHAGNHLVCDFPRLIKSSDEKYAPLGQYFGEIKPTYFTLVKGVEGITGVIMVVCMIIAFTLATRWFRRSLVKLPRPFDKLTGFNAFWYSHHLFIIVYIALIVHGECLYLIHVWYRRTTWMYLSVPVCLYVGERILRFFRSGSYSVRLLKVAIYPGNVLTLQMSKPPTFRYKSGQYMFVQCPAVSPFEWHPFSITSAPGDDYLSIHVRQLGDWTRELKRVFAAACEPPAGGKSGLLRADETTKKILPKLLIDGPYGSPAQDYSKYDVLLLVGLGIGATPFISILKDLLNNIIKMEEEEDASTDLYPPMGRNKPHVDLGTLMTITSRPKKILKTTNAYFYWVTREQGSFDWFKGVMNEIADLDQRNIIEMHNYLTSVYEEGDARSALITMLQALNHAKNGVDIVSGTKVRTHFARPNWRKVLSKISSKHPYAKIGVFYCGAPVLAQELSKLCHEFNGKCTTKFEFHKEHF

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, 10 introns), 4 mRNA and 12 ESTs. Incorrect prediction from Phytozome (first 216 AA are msiing).
O48539 (partial mRNA, 5'end missing), O24214 (partial mRNA, 5'end missing), Q0JJJ9 (partial prediction, 5'end missing), A2ZXJ9 (partial prediction, 5'end missing), Q5JL59 (partial prediction, 5'end missing), A2ZXJ8 (partial prediction, short 5'end).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGAGGGGCGGCGCCTCCTCGGGACCCCAGCGATGGGGCTCGGCGGGGACGACACCGCGGTCGCTGAGCACGGGCTCGTCGCCGCGCGGGTCCGACGACCGGAGCTCCGACGACGGGGAGG
AGCTGGTCGAGGTCACGCTCGACCTGCAGGACGACGACACCATTGTGCTTCGGAGCGTCGAGCCCGCGGCGGCGGCGGCGGCGGGGGTGGGGGCGGGGGCGGGGGCGGCGTCGGCGCGGG
GGGAGCTCACGGGTGGCCCGTCGTCGTCGTCGTCGCGGTCGAGGTCGCCGTCGATCCGGAGGAGCTCGTCGCACCGGCTGCTGCAGTTCTCGCAGGAGCTCAAGGCGGAGGCCATGGCCC
GGGCGCGGCAGTTCTCGCAGGACCTGACCAAGCGGTTCGGCCGCAGCCACAGCCGCAGCGAAGCGCAGGCGCCGTCGGGCCTCGAGTCCGCGCTCGCCGCCCGCGCCGCGCGGCGGCAGC
GCGCGCAGCTCGACCGCACACGCTCCGGCGCCCACAAGGCGCTCCGCGGCCTCCGCTTCATCAGCAGCAACAAGGCCAACAACGCCTGGATGGAGGTGCAGGCCAACTTCGACCGCCTCG
CCCGCGACGGCTACCTCTCCCGCTCCGACTTCGCCGAATGCATCG
GTATCCCTACCCACCGATCGCCCACCACCACCATTTTTCCCCCCACCGAATTGCTTTCTCACGCAGCATCCGCGA
CATTGTCGTCGTGCAGGGATGACGGAATCGAAGGAGTTCGCGCTCGAGCTGTTCGACACGCTGAGCCGGCGACGACAGATGAAGGTGGACACGATTAACAAGGATGAACTCCGCGAGATC
TGGCAGCAGATCACCGATAACAGCTTCGACTCCCGTCTCCAAATCTTCTTCGAAAT
GTAATTAGCTACCCAATCCACTATCTCTGCAATTTTGCCATTATTACCAGTACTACTAGATAAA
CAGAGTATCAACTCTGCTAAATTTTGTGGCGATTTTCGTCTGCATTTTTACCAGGGTGGATAAGAACGCGGACGGCCGGATTACGGAGGCGGAGGTGAAAGAGGTGAGCAAAACATAATC
CACGCCCATGTCTATGCTGTTCCTACGCTTGGTGGTCCAGCAGTACGAGTTCTTCTGTGCTTTTTTTCTCCATTCTTTTTAAATTTGCTATTTCAGGATATCAAATCGAATAATTTAGAC
CGTTTTGACAACCGTAGTTGTATATTTGGTCGATTGAGCTGTCCTCGCCTTGCTTGGGCCACACCAATATTTGTTTTCTCCCTCCAAAATATGCACACATCTAAGTCGCGATTCGCAACC
TTACCGGATAGGATTACTTCTTAATTCTGATTAGAGGGAAGAACAGTTCTTAATTAACACGTAACAATCCGATAAGAGAGGACATTTTAGATCAGAAGCGTACTACGCAGGGAAAGGAGA
GAGGCATGCAGTACAAAGGTACGAGAAAAGAAGAAAAAATGCTTGGCTTCCAATCGGAGTCGGTGAGCGAAACCGGCGGGGAAAGCATCACGGCGACACCAACTCCTACCTGCCAGTTTT
GGGACACTCATTTTCTTTAACTTTTAGGAAAAGCCGAAAAGGGGTACCCTTTCTAGAACGTGTGAGGGCAGTTTCGGTAATCCGGTGGGCTTCGTGGCTTACAGAAGCCCTGTGAAGCGG
CAGTAGGTGAGGGGCATTTCTGTCAAACCCACTAAGGGCAAGTTTTATAGTAGAGGTGGCCACCACATCCAATTTCATGCATGACATATATAATTAAATTAAGAGGTGATATGTATAATA
GATTACCTCTACTACACAATCCCCAATATCTCTAATACTCTCACATGTTTATTGAAGTTTATCCCCAATATCCCCAATATCCCTTGTATGAGAGGTGACTATTTCTCTCTCATCCTTGTT
CTCTCCTCCACCTCACTATTTAGTCCCATGTGGCATCTTAGGGCTTGTGCTTGGATGCCCATAGTACTTGCCCTAATGCTCTCTGATCAGCTCAAACGATGCGTTGACAAGATGAGTTAT
AAAGTAGCCTTTTAAAAAAAAAACGATTCGCTAATTTTTTGCCTCTCACTGATGTCACTAACAGTGCTGCGGAGCAAATTGAGTTGGTAGGGGTTTTTTTGGCTGCTCTGGGTTGCTTTC
TTGAGGTTTGGAAGATGTTGGATCATGTTGACTCAGCTCGTGTTTCTCCTTTCACCTACGCGCAGATTATTATGTTGAGCGCGTCTGCCAATAAACTGTCGAGGCTTAAGGAGCAAGCAG
AAGAGTACGCCGCTTTGATCATGGAGGAGCTTGATCCTGAAGGGCTCGGCTACATTGAG
GTAAGCTCGATGTTCTTAAGCAGTTAAGCTGGTGTAAACCCTCATAATGCGCTTATATCTG
TAATAGTTGTACTCATGCACTGTAAACCCACACTATTTACTTCCACCAAACCTTTAGGAATAGTTGACTGAAGCTGTCTGTTTTGGGATGGTAGTGCTGTAGTGGGGTAGTACCAGTAGA
GCCTAATTGATGACTTCGTGCAGTTCTATTTTATCTGTCACATTGCTCCGGTGATGGGTGTCCCCCAACCGGCCAAGCGCGCTTGTTATGATAATTAAACAAAAATTTGTCCGTCACAGC
GTCAAGGCCAACTACTTGCAAAGGGACGCATCATTCATAACAAAAAGATGATGCTGGTACCCCACAAACTTCTTGCCCACCCATCATCATTTATATCGAAGTTGTTGAGCAGACGTAGAC
CAGTGTAGCTGTGTAGCATCCATTTCAGTTTGGGAACAGTTTCGCTTCGCTCCCCTGCCTAATTCAATGCCATCCTTGCTGCCCACAGCTTGTTGCCGCACCATTTACAAAGGAATCATT
TACAATGCCAGAAATGTTCCATCACGGTTCCATGGCTCTTGGTCGTGCATTGCTCTGCCTTGCCCGGGTGCAAGGGTAGGGAAGCTGATGTAGTAACTAATAAGCAGGGTAGCAAGTACT
AGGGATTTAGGAACCAGGATTAACCCATGCGCTCATGTACTAGTAGGAATGTCGATCAAGGGTGTTTATCTGGACCATGCAGCCAGTGGCTTTGGTGATTGCCATCCATGATCCATGTTA
GGCCTCATTTGTTATGGTTTTAGTTCACCAGGTGATTCAAGTCCCACCTTTTCTAGCAGTGGGATAGCTACAACTTCAGTTTGGTGGGGATTCATATTTTTGTGCAACCGTACCAATTAG
ATCGCCGTGTAGTGTTAACTTGTCTCGTACTTTTTTTACCCTCATAGTATTTGAAGTAAATTAACTTTACATGTTCGATAAGTTGACGCTTCTTTTTCAAAAGATAGCAAGAGATAACTA
GTTGACACAATTGTTTCATTTGAGTCAACACTGATTTAATATTTGTTTGTCCAAAATGGTTAGTTAAGCTTGAGAAAGTTCATGTACATATTTCATAGGGTAATTTCAGGACACATTTGC
CAATATTAGTAAAGCAGCAAACTGTAAATTCGAGTTTCTCTTAAATAAATTATTGAACTATGAATTATATACATCTGAAGAAAATGTTTGATATCTTCTTGATGAGAAGCGTTGCATCTA
TTCACAAATCACAAGTACCATGTACTGCATCTGGTATGACTGCACAACTTTTTACATGAAAGTCCTTTCATATATAAAAAAGGAGGTGTTTTACAATGATCTCTACTAGTAGTGCAACAT
TTTATTTTTTGCCATTGCAGCATAATTCTGTTGTTATATAATCTTGATATTATTATGTATTGGATGGTGAAAATTGATGTGCTGTTGTTGACATGCTCATGTGTTTCTTGCAAACAATTT
GTTGAGCTAATGGAAGTGTGAGGACGTCCCAAAGCCTAGGTGGTGCAACGCTCCGAGGCATGTCAGCGCGAAATATCTGGATGGATGGGTTCTCAAATAAAGCCCAAATAAATACGGTAA
CCATCCAACCTCATCGCAGACCCCGACATGTCTTGAAGAGTGCACTACATAGGCTCTAAGCCATCGGATATGAAATAGAAGACACAACTGTTGGAATAGCCACACCAGTCATCTACGTCA
TATGCCCGTCAACCACTCGATGGTGGCGACAAAAAACATACCCCAGAGACTCGATCTCAACAGAGGCATATTCCCCGGTTATCTCAACCATTTCAAACCCATCCTCATGTGGGACTAGTC
GCCCAGGAATGCAACATAGTCTCACATAAATCATCTCAAGCATGATATCCAAATAATAATTGGTTCTAAGCAATAAGCATAAATAGTCTTAATAAGGTTCTAAGTAGTACTTGGCGACAA
GCCATAAATATTGGTTCATGCGGTAAGCGTGCTACCCAAAAGCCCATAGGCAAACCGACTAGGGTAAATCCCTAGTTAGAACCATCCTGGAAATCTGCAACATCACAAGCTGCATCAAAC
TCCTCATCCAAACAGTCATTACCTGCAGCGCGGTCTGAGCATAAACAAGTAAAAAAAAGCAAGAAATCAGTACATTAATCAAATTAATGTATTGGCAAGTCGGAAACAATCCTAGCATAC
TACATGTTGGCCATATTCAAGGATAAGCTGTGTATAGGTTAATTTGCATAAATGCCAATTTTAGTTCACAACATGTTTCGCAACGGAATTTTATAACAATAGTATAGAGTAAGTAAAACT
TGTAATGTGAATGAATAAATAATACACATCTACCCCTCAAGTCATCACATACCACATATCATTAATCAATTTCATCATATCACGAACCATAGGAAGTTCCGATAAGTTACCAAAACCCGG
TAACCCATACCCTTCGGCCTACCAAGATGCAAGGCTAAACTCTAAACAACTTAATAGGTTGAGGCCAGCCCATACTTAGCACATGTGGTTTGTACTGTTTTCATTAGTTGGTGACATAGA
GTGGGGTCCTTAATCGACCCGGGCGAACGCTCCCCCTATCGGTGTACAACTACCACCCTATGTACACTCGCCGCCCAAGTCTAAAAACAAGTTATTTCCATTTTCAGTTCACAATACTCA
CACACTTAAATTTCTGTCCAGCAACATCAAAATAACCATTTTCACATATAACATTTATCAAAACGAGTAATTTGCAAGGCGGTAACCAAATATAAGCATATAGCAGCAATATAAGCATAG
TATAATCCCAAAGAACACAATAATTGTATTCAAAAGCACTCTATGGTTACAACCAGCAAGGGTTCAATATTTCAAGGTGGATTATGCAGCAATTAGGTCATATCTACCATTCCCACATTT
ATATAATATTTTTTTTACCAAAATTAATACTAGCTAACGTATGCATGTTTGCAATAGAATCATTTAGCCCAATAGAACATAGGATCAATGTGGTCAAAGGAGGGGCAAACTTTCCTTCGT
CTGCAAACTCCTGAGCCTGGTCGTCAACAAACTCACCCTCTTCTTCTTCGACGTATTCTTCCTCTATACAAAATACGTGTATACGATAAATACAAAAATGCATAAAAACCAAAATGCATG
AAAATGCATGAAATTTATGCAGTGAGTGTGTGCTGGTCTCAGGTGGTCTCTGGTGAAGGAATTTTTATTTTGTCACTTTTTATTTACAGAGATATGCATTTTACAATTAAAAAGGTTTAA
AAGGGCTAAGTTTTATTAAGCAACATTTTTGTACAGAAGTGAACAAAATTCCTTTTACAAAGTTATAGAGCATGATTTTAGAAAGTTAACAGAAGTGGTTTCACAATTTTTAGAGCTATA
TTCAATTCGTTATGGATTTAACAAGTTCTAGGCAACATTATGGCAAAACAAAAATAAAGGAAAAGTTTGTACAGAAAGTACCCATTTTTATATTTTTGTAAAATATTTCACAGCTTTATG
GATCTAACAAAACTGGTTTCACAATTTTTGAAGTTAAAATGAATTTTCTACAAATTTTAGAAGTTCTGCTCATTCTCTGCTTTAAACCAAAATAGAAATCAAAATTTGAAATTGCATTCC
AGCCGGGTCCACAGGTCAGTGAAAGAAGATTTGCAGAGAGGCCCTCGGAAGTTGGGGGAATCATCCCGCACTTCTTCTGCCACCTGGACAGCAAACTTTATTAAGAGTCTCTATTCTTTT
GTTTATTTCCATCAAGGTCCTGCTATAGTAATATGAGTCATGGCAGTTTTCAGATTGGACCCTAGAGTCGATCAAATTCAAGAAATGAAGTCCCCAGCTATCTCACATCGGGAGCAGCCA
TGGCTGAGCTCGGTCTACGGCTCACCGGCGGCGATCAGTGGATCGAATCGGTTCGAGCACAAAAGAGAAAATGTAGAGAACGTTCTTGCGCATCCGTGAGTGGTGCTGGTGAGGGAAATG
GTGGTCTGTAGCCCATAGAACATGAGCTACAGCGGTGGTGTGTCTCGGTATGCCCATGTATGTGCATGCAGAGGCTTGGTTAGTGCAAAGGGTTAGTGCATGTGCTCTCATATGGTACCA
GGGTGCTCACCAAGCAGAGAAACGGAGGCAGCGAGGTCCAGGGAGCGGCGGAGACGGTGGTTGATGGCCAACGGCGGCAAAACTCCGGCGTCGACGTCGCCGGGTCGACTCAAGGCGCGA
ACTGTAACTTCGAGAGTACGGGGGTGTTAGAGATGAGCCACAGAGGGTGCATGCGCGAGGAATCCGGCGGAAACTCACCGGAGCTTGGTGTTGCTTCGGTGGTGAGGAACGGCGGCCGGA
GCGGCGTCGGCGGTTCGGGTGGCCGGCGGCGAGGACGGTGACGCCCACCACGTGCTCGACAGATTGGTCCTAGGGCAAAAGGGGTACGGGTGAGCTCGGCGTGATGCGTAGGTCACGTTC
CATAGGAGGAAAGAGAGAGGGACTCACCGGGGATGCACGGCGACGACGGCTAAGTCGCCGGAGCCGGGGAAGATGGCCGAGCTCTGGGCATTCTGTGCGTGGGGTGTGTTTTCTTGGACT
TGGAACGCGATGTGGGGAGCGAGCTGTTGCTTCTGGTGCTTTGGCTTGGGAAATAAGGAAGAGTGGAGTGGGGGAGTGAGAGAGAGAGAGGTGGCTGGTGCACTCATTGTGTTCCTTGGG
CATTTATTGGGCATGAGGAACGGTGGATGCTGTGAGGGGAGAGTGGGAGGCTGTCATGTGGGTCCCGGGGGTTGTGGGGCCCACTGTCAGTGAAAGAAATTCGAAAATAGCCTTGGAGGC
TAAGTCAATGAGGGTTACCTGCCAAGGATCTTTGGAGGGGATTCAAGGTGGATTTTGAGCAGCAAGAAATCTGGCTAGATATCCTCTTGGTCAGGGGTGATGTGGAGAGTAAATGTGCTG
AAGTGGGTTGGGTTAGAAGTCTCTGGTTTAGGTTTGATGGAGTGATGAACATGTGTTGACAGTGTTGGTTAGCAGCAGTTGACAGTGCAGTTAGCAGCTGATTGGATTTTTGGAGGGAGA
GAAGAAAGGGTTAGAGAGTGATCCAGGGTATGCCACTCCTCAGGGTGTTAGAAGAAAGTTAGTAGAAGACTTTGGCTGAAACCAAACTTCAAAAAGAGGTTTTGAAATAAATTTTACAGA
GAGAGCAAGTTTGAATCTGCTAAGCAGTTTTTTTTTTCAGGATTTTGGAGAGATTAAAGTAGATCAACAAGTTAGCAAACCTTACTGAAAAACTCTGAAAATTTGTGGGTTGATTTCTGA
CATATCAAGGTATTTTTGAGAATTTTTGTGGAATTTTTGGATGCATATAATTACCAGATTAATTGTTTTTGTGACTCTAGGCCTATCAAGATGCATGTGATGATGAGATGATTAAGATCC
AAAAACAATTAAAATCACTCCACAACCACATGATGCATTTAAATTAAATTTAGTTCTCAGGTTTATAGGCTTGGGTATGTTACAGGAAGGGACCAACTTTCATTTTTAATAGGGAGTATC
TAAAAAACTGCCGCAAGTTTTTTTGAGTGAAAAACTTTCACATGTAACTATAGTATAATCGAAGTGTAACTACATTGTAACTATACTATAACTGCATTGTAACTATACTGTAACTATGAT
ATAACTTATATAAAACTTGTATTTAACTATGGTTTGATTGGTTAGCACCGGAATATTACACGTGACATGTGCGCAAATTTCTTTCTAGCAATTTTTTCCCTTCATGCACAAATCTCGAGG
CAATCCGATGGCTACAAATCCGAAAGTTTTGGAGGCAAAAGAACTTGTGGAAGTTTTCTAGCAATTCCATTTTAATATCACAGAACACTATATATATTAATTTAGGCGGTCTTGTGCTAT
GTATTCAGTATCCTCCATGTGTAGTACATGTATAGTGGCCCAGTGGTTGAGCTTATGGACCTTCATAGTACAATTTCTTTCTTTAGGAACCAGTTTTGAGAGAGTAGCTTATGTTTTGTT
CATAGAATATTATCCTCAAATCAACTAAATGTGCTTATAGTTTTGCATCAATGAAATGTGAATGACATGACTTCTGAAAAATACACTGTTTTTTTTTTTGTTTGTGTTACAGCTATGGCA
ATTGGAGACACTTCTGTTGCAGAAAGATACCTATATGAACTATAGTCAGGCCCTTAGTTACACAAGCCAAGCACTGAGCCAGAATCTTGCAGGGCTAAGGAAGAAGAGTTCAATCCGCAA
AATAAGCACCTCTTTAAGCTACTATTTCGAGGACAACTGGAAACGTTTATGGGTGCTTGCATTGTGGATTGGGATAATGGCTGGACTGTTCACCTGGAAATTCATGCAGTATCGTAACCG
ATATGTCTTTGATGTGATGGGCTACTGTGTCACAACAGCAAAAGGAGCTGCTGAAACCCTAAAGCTGAATATGGCAATTATCCTCCTGCCAGTATGCCGTAACACCATTACTTGGTTGCG
AAGTACAAGGGCTGCACGGGCACTACCTTTTGATGACAACATCAACTTCCACAAG
GTTAGCAAATAGTCTGTCATTGCCTCTGTTATCCCCTTGATACAATCTAGCACAGTGATCTGTAT
TGAAATCAATGAATTTAGACCTTGACCCAGTACTCTAGAATGTAGATGCTGCATTTGAGATACAAGCACAAGTAATAGGGTCATGACACAACTGAAAAATTTATAATATAAGTAGATATA
TTGAACATTCTTCTGCTGACAAACTCGAAAAAGAAACTAACAACTTGTGTTTTTGTTGTAACGGCAGACTATTGCAGCAGCAATTGTGGTTGGTATAATCCTCCATGCAGGGAACCACCT
TGTATGCGATTTTCCACGGTTAATAAAATCATCAGATGAGAAGTATGCTCCTTTGGGCCAGTATTTTGGGGAAATAAAGCCAACATATTTTACATTGGTCAAAGGAGTGGAGGGCATCAC
TGGGGTAATCATGGTTGTATGCATGATAATTGCTTTTACTCTAGCAACCCGGTGGTTCCGCCGTAGCTTGGTTAAGCTTCCAAGGCCATTTGACAAACTGACTGGCTTCAATGCCTTTTG
GTATTCTCATCATCTGTTCATCATTGTGTATATCGCGCTCATTGTTCATGGAGAGTGTCTATACCTTATTCATGTCTGGTACAGAAGAACG
GTAAGATATTTTTGAATTTATCTTCATTC
ATTGGTCTAAGATAATTCGAATTTCTAATGTCCTCATGCTTTTATTTCAATGCAGACATGGATGTATCTTTCAGTGCCTGTTTGCTTGTATGTAGGGGAGAGGATTCTAAGGTTCTTCAG
GTCTGGCAGTTATTCTGTCCGGCTATTGAAG
GTCAATCCAAAGACATTACAAAATTGAGCATTGATACTTTGTGCCTTGTACTAATTCAGTAACTTTCTTAGCAGGTGGCCATATATCCA
GGTAATGTTTTGACACTGCAAATGTCCAAGCCTCCCACGTTCCGTTACAAGAGTGGACAATATATGTTTGTTCAATGTCCAGCAGTGTCTCCCTTTGAATG
GTACTTGGTGCTTTTCAGC
TGAAATTTAATTGAATTATGTACACTGGATAACATTGCTAAGATAGATTACTTCTAATTTTCATGTGTAGTGCATATGTACGAAAGGCAAACTCAGGGCAATTAATCTAACATTAACATT
TATTGTCTCTTGTAGGCATCCCTTCTCAATTACTTCAGCACCTGGGGATGACTACCTCAGCATTCATGTTCGACAACTTGGTGATTGGACACGAGAACTCAAGAGAGTATTTGCTGCAGC
TTGTGAGCCCCCAGCGGGTGGTAAAAGCGGCCTTCTTAGGGCAGATGAGACAACTAAGAAAAT
GTATGAACACTCCCTATGTTTACCACAACAAAATTTTGTACTTTGTGTGCACTAACA
TTTATAATTTTGTCCTTTTGGCTATGCAGCTTACCCAAGCTTCTGATTGATGGACCGTATGGTTCTCCTGCTCAGGATTACAGCAAGTATGATGTTTTATTACTTGTTGGATTAGGAATT
GGTGCGACACCCTTTATTAGCATATTAAAAGATCTTCTGAATAACATCATCAAAATGGAGGAAGAGGAG
GTATGTTTTCTGCAGTTGTCTTCCTAGTATTGCAAGTAAATAAAATATTAC
TCTTTTCCTTATCATGCTTATCTTCTTTGTGTAGTATAGTAACCATTTACGTTTTTAGCTGTGCCTTATGTTTTCGGTGTCCTCTGTTTCTCCGTATTTGCAGGATGCTTCTACTGATCT
TTATCCACCAATGGGTCGGAATAAGCCACATGTTGATCTGGGCACACTTATGACGATTACCTCAAGACCAAAGAAGATCTTGAAGACCACAAATGCTTACTTTTACTGGGTGACACGTGA
GCAAGGCTCTTTTGATTGGTTCAAAGGAGTCATGAATGAAATTGCTGACTTGGATCAAAGG
GTAAATAGACCAATTGTTTTTTTTCCAGTGCAGTTTGTTTGTCTTCAGAAATTTGCCAT
GCATTTCCTTGTGAACTTGTAGTTACGGTTGCCTTTGATTCATGCTAGAATATCATTGAGATGCACAACTACCTAACAAGCGTCTATGAGGAGGGGGATGCCAGGTCAGCACTCATCACC
ATGCTCCAAGCTCTGAACCATGCCAAGAATGGAGTTGATATTGTCTCTGGGACAAAA
GTAAGTATTGGCAGGACGTTTAACATCTCCACACGGATGCTGTAAAGCTGTTTTGTTTGATAT
TAAGTTTTTCACCTCACTGGTTATTATCGTAAAGAACTCAAAGTTAATAGAAATCACATTTGCCTTGTCCATTTAATTGTCACTGCACTTGTTTTTCAGGTCCGGACACATTTTGCACGA
CCAAATTGGAGAAAGGTCCTTTCTAAAATTTCCTCCAAGCATCCATATGCCAAAATAG
GTTAGTTTACATGCTTCAAGTCTAACTAATCTTTATCTTGATTTCCTTTGGTCATTCATGCC
TACTACCTAACTCTGCATATATAACTTATTAGATGTACTGAGTACTACATAAAAGAAACGCAAAACTTCCAATGATATATAATAAAAAATGGGAAAGGGGAAAACTTGAAATTCCACGCC
TTCTACACTTTCAGCTCTGTTGTAAATGAGCAGATCTGTAAACAAGTTACCACCTCGGGCTGAGTTACTCATCAACATTTGATCTATATAGTTAATATAGTGATATCGTAGACACATTAT
ATATGGTTTGAGTACTTATTTGTGTTGCATACAGGTGTATTCTACTGTGGAGCTCCAGTCCTGGCACAAGAACTAAGCAAACTTTGCCATGAATTCAACGGGAAATGCACAACGAAGTTC
GAATTCCATAAGGAGCATTTCTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGAGGGGCGGCGCCTCCTCGGGACCCCAGCGATGGGGCTCGGCGGGGACGACACCGCGGTCGCTGAGCACGGGCTCGTCGCCGCGCGGGTCCGACGACCGGAGCTCCGACGACGGGGAGG
AGCTGGTCGAGGTCACGCTCGACCTGCAGGACGACGACACCATTGTGCTTCGGAGCGTCGAGCCCGCGGCGGCGGCGGCGGCGGGGGTGGGGGCGGGGGCGGGGGCGGCGTCGGCGCGGG
GGGAGCTCACGGGTGGCCCGTCGTCGTCGTCGTCGCGGTCGAGGTCGCCGTCGATCCGGAGGAGCTCGTCGCACCGGCTGCTGCAGTTCTCGCAGGAGCTCAAGGCGGAGGCCATGGCCC
GGGCGCGGCAGTTCTCGCAGGACCTGACCAAGCGGTTCGGCCGCAGCCACAGCCGCAGCGAAGCGCAGGCGCCGTCGGGCCTCGAGTCCGCGCTCGCCGCCCGCGCCGCGCGGCGGCAGC
GCGCGCAGCTCGACCGCACACGCTCCGGCGCCCACAAGGCGCTCCGCGGCCTCCGCTTCATCAGCAGCAACAAGGCCAACAACGCCTGGATGGAGGTGCAGGCCAACTTCGACCGCCTCG
CCCGCGACGGCTACCTCTCCCGCTCCGACTTCGCCGAATGCATCG
GGATGACGGAATCGAAGGAGTTCGCGCTCGAGCTGTTCGACACGCTGAGCCGGCGACGACAGATGAAGGTGGACA
CGATTAACAAGGATGAACTCCGCGAGATCTGGCAGCAGATCACCGATAACAGCTTCGACTCCCGTCTCCAAATCTTCTTCGAAAT
GGTGGATAAGAACGCGGACGGCCGGATTACGGAGG
CGGAGGTGAAAGAG
ATTATTATGTTGAGCGCGTCTGCCAATAAACTGTCGAGGCTTAAGGAGCAAGCAGAAGAGTACGCCGCTTTGATCATGGAGGAGCTTGATCCTGAAGGGCTCGGCT
ACATTGAG
CTATGGCAATTGGAGACACTTCTGTTGCAGAAAGATACCTATATGAACTATAGTCAGGCCCTTAGTTACACAAGCCAAGCACTGAGCCAGAATCTTGCAGGGCTAAGGAAGA
AGAGTTCAATCCGCAAAATAAGCACCTCTTTAAGCTACTATTTCGAGGACAACTGGAAACGTTTATGGGTGCTTGCATTGTGGATTGGGATAATGGCTGGACTGTTCACCTGGAAATTCA
TGCAGTATCGTAACCGATATGTCTTTGATGTGATGGGCTACTGTGTCACAACAGCAAAAGGAGCTGCTGAAACCCTAAAGCTGAATATGGCAATTATCCTCCTGCCAGTATGCCGTAACA
CCATTACTTGGTTGCGAAGTACAAGGGCTGCACGGGCACTACCTTTTGATGACAACATCAACTTCCACAAG
ACTATTGCAGCAGCAATTGTGGTTGGTATAATCCTCCATGCAGGGAACC
ACCTTGTATGCGATTTTCCACGGTTAATAAAATCATCAGATGAGAAGTATGCTCCTTTGGGCCAGTATTTTGGGGAAATAAAGCCAACATATTTTACATTGGTCAAAGGAGTGGAGGGCA
TCACTGGGGTAATCATGGTTGTATGCATGATAATTGCTTTTACTCTAGCAACCCGGTGGTTCCGCCGTAGCTTGGTTAAGCTTCCAAGGCCATTTGACAAACTGACTGGCTTCAATGCCT
TTTGGTATTCTCATCATCTGTTCATCATTGTGTATATCGCGCTCATTGTTCATGGAGAGTGTCTATACCTTATTCATGTCTGGTACAGAAGAACG
ACATGGATGTATCTTTCAGTGCCTG
TTTGCTTGTATGTAGGGGAGAGGATTCTAAGGTTCTTCAGGTCTGGCAGTTATTCTGTCCGGCTATTGAAG
GTGGCCATATATCCAGGTAATGTTTTGACACTGCAAATGTCCAAGCCTC
CCACGTTCCGTTACAAGAGTGGACAATATATGTTTGTTCAATGTCCAGCAGTGTCTCCCTTTGAATG
GCATCCCTTCTCAATTACTTCAGCACCTGGGGATGACTACCTCAGCATTCATG
TTCGACAACTTGGTGATTGGACACGAGAACTCAAGAGAGTATTTGCTGCAGCTTGTGAGCCCCCAGCGGGTGGTAAAAGCGGCCTTCTTAGGGCAGATGAGACAACTAAGAAAAT
CTTAC
CCAAGCTTCTGATTGATGGACCGTATGGTTCTCCTGCTCAGGATTACAGCAAGTATGATGTTTTATTACTTGTTGGATTAGGAATTGGTGCGACACCCTTTATTAGCATATTAAAAGATC
TTCTGAATAACATCATCAAAATGGAGGAAGAGGAG
GATGCTTCTACTGATCTTTATCCACCAATGGGTCGGAATAAGCCACATGTTGATCTGGGCACACTTATGACGATTACCTCAAGAC
CAAAGAAGATCTTGAAGACCACAAATGCTTACTTTTACTGGGTGACACGTGAGCAAGGCTCTTTTGATTGGTTCAAAGGAGTCATGAATGAAATTGCTGACTTGGATCAAAGG
AATATCA
TTGAGATGCACAACTACCTAACAAGCGTCTATGAGGAGGGGGATGCCAGGTCAGCACTCATCACCATGCTCCAAGCTCTGAACCATGCCAAGAATGGAGTTGATATTGTCTCTGGGACAA
AA
GTCCGGACACATTTTGCACGACCAAATTGGAGAAAGGTCCTTTCTAAAATTTCCTCCAAGCATCCATATGCCAAAATAGGTGTATTCTACTGTGGAGCTCCAGTCCTGGCACAAGAAC
TAAGCAAACTTTGCCATGAATTCAACGGGAAATGCACAACGAAGTTCGAATTCCATAAGGAGCATTTCTGA

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