Entry information : RnoGPx07
Entry ID 5600
Creation 2007-07-25 (Christophe Dunand)
Last sequence changes 2007-07-25 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2007-09-04 (Gregory Theiler)
Peroxidase information: RnoGPx07
Name RnoGPx07
Class Animal glutathione peroxidase    [Orthogroup: Gpx1005]
Taxonomy Eukaryota Metazoa Chordata Mammalia Muridae Rattus
Organism Rattus norvegicus (Norway rat)    [TaxId: 10116 ]
Cellular localisation N/D
Tissue types Adipose tissue
Embryonic tissue
Genitourinary
Heart
Lung
Placenta
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RnoGPx07
start..stop
S start..stop
MmGPx07 373 1.27e-134 1..185 1..186
SscGPx07 328 3.6e-117 18..185 19..186
PtroGPx07 326 4.16e-116 18..185 20..187
HsGPx07 326 4.16e-116 18..185 20..187
Literature and cross-references RnoGPx07
Literature Lee,N.H., Glodek,A., Chandra,I., Mason,T.M., Quackenbush,J., Kerlavage,A.R. and Adams,M.D. Rat Genome Project: Generation of a Rat EST (REST) Catalog & Rat Gene Index.
DNA ref. GenBank:   AAHX01039029.1| (1134..8483)
Cluster/Prediction ref. GenBank:   XM_216473 UniGene:   Rn.4130
Protein sequence: RnoGPx07
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   185 (166)
PWM (Da):   %s   20889.62 (18932.6)  
PI (pH):   %s   8.79 (9.03) Peptide Signal:   %s   cut: 20 range:20-185
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVAAVATAWL LLWAAACQSE QDFYDFKAVN IRGKLVSLEK YRGSVSLVVN VASECGFTDQ NYRALQQLQR DLGPYHFNVL AFPCNQFGQQ EPDSNREIEN FARRTYSVSF PMFSKIAVTG 
TGAHPAFKYL TRTSGKEPTW NFWKYLVAPD GKVVGAWDPT VPVEEIKPRI TEQVMKLILQ KREDL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, 2 introns), 1 mRNA and 28 ESTs.