RedOxiBase: View Perox 5608

Entry information : DrGPx04-B (gpx4b / DrGPx04-B)

Entry ID	5608
Creation	2007-07-25 (Christophe Dunand)
Last sequence changes	2007-07-25 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-05-11 (Christophe Dunand)

Peroxidase information: DrGPx04-B (gpx4b / DrGPx04-B)

Name (synonym)

DrGPx04-B (gpx4b / DrGPx04-B)

Class

Animal glutathione peroxidase [Orthogroup: Gpx1002]

Taxonomy

Eukaryota Metazoa Chordata Actinopterygii Cyprinidae Danio

Organism

Danio rerio (Zebrafish) [TaxId: 7955 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	DrGPx04-B start..stop	S start..stop
PretGPx02	322	3e-114	1..191	1..190
XlGPx04	296	2e-104	22..191	1..170
GgaGPx04	291	3e-102	22..191	1..170
DrGPx04-A	291	4e-102	20..191	15..186

Literature and cross-references DrGPx04-B (gpx4b / DrGPx04-B)

Literature	Thisse C., Degrave A., Kryukov G.V., Gladyshev V.N., Obrecht-Pflumio S., Krol A., Thisse B., Lescure A. Spatial and temporal expression patterns of selenoprotein genes during embryogenesis in zebrafish. Gene Expr. Patterns 3:525-532(2003).
Protein ref.	UniProtKB: Q802G1
DNA ref.	GenBank: NC_007113 (56700494..56712808)
Cluster/Prediction ref.	UniGene: Dr.24921

Protein sequence: DrGPx04-B (gpx4b / DrGPx04-B)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	191 (172)
PWM (Da):	21362.71 (19300.6)
PI (pH):	8.59 (7.92)	Peptide Signal:	cut: 20 range:20-191

Sequence 0
Send to BLAST
Send to Peroxiscan

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MWLFQRALLV GAVGSKSFAR AMCAQANDWQ SAKSIYEFSA IDIDGNDVSL EKYRGYVCII TNVASKCGKT PVNYTQLAAM HVTYAEKGLR ILGFPCNQFG KQEPGSEAEI KEFAKGYNAE
FDLFSKIDVN GDAAHPLWKW MKEQPKGRGT LGNNIKWNFT KFLIDREGQV VKRYGPMDDP SVVEKDLPKY L

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 2, 5 introns), 3 mRNA and 262 ESTs.