Entry information : CsGPx02 ( orange1.1g028944m)
Entry ID 5715
Creation 2007-08-14 (Christophe Dunand)
Last sequence changes 2016-04-06 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2016-04-07 (Catherine Mathe)
Peroxidase information: CsGPx02 ( orange1.1g028944m)
Name (synonym) CsGPx02 ( orange1.1g028944m)
Class Plant glutathione peroxidase    [Orthogroup: Gpx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus sinensis    [TaxId: 2711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsGPx02
start..stop
S start..stop
CclGPx02 395 5.21e-143 1..194 1..194
EcamGPx01 297 2.53e-104 3..199 1..197
EglGPx01 296 1.42e-103 3..194 1..192
EguGPx01 296 1.46e-103 3..194 1..192
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '5715' 'join(36420..36575,36961..37037,37802..37863,37969..38087,38183..38374)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 36420..36575 154 N° 2 36961..37037 75 N° 3 37802..37863 60 N° 4 37969..38087 117
N° 5 38183..38374 190  
join(36420..36575,36961..37037,37802..37863,37969..38087,38183..38374)


exon

Literature and cross-references CsGPx02 ( orange1.1g028944m)
Literature Close,T.J., Roose,M.L., Federici,C.F., Mandal,J., Fenton,R.D., Luck ,R., Forster,L., Morse,J., Flores,P., Wanamaker,S., Kim,H.R., Kudrna,D., Collura,K., Wissotski,M., Byrne,M., Stum,D., Smart,D., Muller,C. and Wing,R. Development of EST Resources and New Genetic Markers for California Citrus - Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11.
EST ref. GenBank:   DN620642 [3' end]
Cluster/Prediction ref. UniGene:   Csi.1341
Protein sequence: CsGPx02 ( orange1.1g028944m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   201
PWM (Da):   %s   22698.63 Transmb domain:   %s   i9-26o
PI (pH):   %s   9.21
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTLRLMKNSNWVSFLFIVFAFFLYFYKYPSSFSAKNMATQEAPKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNDFEVLAFPCNQFAGQEPGSNEEI
QEVACTMFKAEFPIFD
IDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL*

Retrieve as FASTA  
Remarks Complete sequence from genomic
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACATTGCGTTTGATGAAAAATAGCAACTGGGTTTCATTCCTTTTTATTGTTTTCGCGTTTTTCTTGTATTTTTACAAATACCCATCTTCTTTTTCTGCAAAGAATATGGCTACGCAA
GAGGCTCCCAAGTCCATCTATGACTTCACTGTCAAG
AGGTATTTTTTTTTTCCTCCGCTTTTTTAGGTTATGAATTTTATGCTTTATGTTTCGTTGTTTTCATGGAAGTTTATGTATTTA
AGCATCAGCTTTGGTTAGATTGCTGCTGTGGGCTGTTGTAAACTGCTCCATTGGATTTATTAGCTTTTCACGTTTTGATTGTTAGTGATTTGTTATATATTTTGATTTTATTGATAATTT
GGTAGTTGACGTTCTTAAGAAATTGAGCACCACATAAATTTTATGTTTTGGTCTGTGTCTAATTTTTGTTCTGTTTGGACCCTGAAAAACGAAAAATGATATATAAACATCTTACAAGAA
TCGGCGATTTTGAAGGGCTCTGACGATATCTGCATGTGCTCTGATAATTGGGTTCAATTTCAGGATATTCGTGGAAATGATGTGAGTCTAAGTGGGTACCGTGGGAAGGTTCTTCTGGTA
GTGAATGTTGCTTCCAAATG
TGGTAATGTAGCTTTATTTCTTCTACATTAAAATGTCTTGATGAACATTCCTATGACATGGTAATACTTTTAATCTCCTAATTGCATTTCCAATCTTTAT
TTATGCCATGTAGGCGCATATTATATACTTCATGCTGTGTAAACTTTGCTCACCCCAGTTTGTAATATGATTGAGGCAAAATTAGTTGCAATTGTCATCCCTATATTTTGTATTGAGGCT
GAAATTCAGTGTTAGTCAGGTAGACACCATAGCTTAGCGTTAGAAATACTGCAACATCTTGTATCAGATCTTATGCTGTCTTCTCTAAATTCTCATACACAGGCATGGCTATATAATTTC
GGTTGATAGATGCACTGGGAATGGATTTCAGAGTTTGAACAATTGGAAGTAACATAGAAAGAACAGAGCTTATAATCTGCCTCAAACATAATATTGTGGCCCCCCCTTGATCTAGTTCAT
TTCATTTTCGGCCACTAGAAGTGACACAATTTTCTTCCCTTCTGGACTATGGTGAGGTGTTTTACACAAATTAATAGGTTGGGTAACAGATATGCTTTGCTCAATATAGAATGGCACTCT
GGTCACCGCTGTTGTTTAATAAAAGAAAGTTGCTGTTCTCCATCTGAAACTGAATGCAGAGAGTGATAATCTCTTTTCCAAGGCTGAAGCTTGTCATGTGTCTTGTGCTTGAATTAGCTA
GCAAGCTGCAGGTTTTCTTGCTTGATATCTTTTGTGTTTCTCATGTTATATTATCATTCTTTGCAGTGGCTTAACGCAATCTAACTATAAGGAACTGAATGTTTTGTATGAAAAATACAA
AAACCAAG
AGGTCTGTATTTCATTCTTGCCCGGCCATGTAATAAGTTTGTTGAGTTCCATAATGTTTCCAAAGACTAGAATTTAGTCTCCTAAACGAGCAGAACTGCTAATGCAGACTTT
GAGGTCCTTGCGTTCCCTTGCAACCAGTTTGCAGGACAGGAGCCAGGAAGCAATGAGGAAATTCAGGAAGTTGCATGCACAATGTTCAAAGCTGAATTCCCAATCTTTGATAAG
AGGTAA
TCCTTTATACGCAGAAGACCAGTTCAAAGTAAAAGTTTCTTCTCAACCCATATGCACAATGTTTTAACACTGCTTTACTTTGCTATGGTAGATTGATGTGAATGGAAAGAATGCGGCACC
TATTTACAAGTTTCTAAAATCAGAGAAAGGAGGATTCCTTGGAGATGCAATCAAGTGGAATTTTACCAAGTTTCTGGTTAATAAAGAAGGGAAGGTTGTAGAGAGATATGCTCCTACAAC
ATCACCTCTTAAGATCGAGGTTGGAACAACGATTCCTCTTTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACATTGCGTTTGATGAAAAATAGCAACTGGGTTTCATTCCTTTTTATTGTTTTCGCGTTTTTCTTGTATTTTTACAAATACCCATCTTCTTTTTCTGCAAAGAATATGGCTACGCAA
GAGGCTCCCAAGTCCATCTATGACTTCACTGTCAAG
GATATTCGTGGAAATGATGTGAGTCTAAGTGGGTACCGTGGGAAGGTTCTTCTGGTAGTGAATGTTGCTTCCAAATGTGGCTTA
ACGCAATCTAACTATAAGGAACTGAATGTTTTGTATGAAAAATACAAAAACCAAG
ACTTTGAGGTCCTTGCGTTCCCTTGCAACCAGTTTGCAGGACAGGAGCCAGGAAGCAATGAGGAA
ATTCAGGAAGTTGCATGCACAATGTTCAAAGCTGAATTCCCAATCTTTGATAAG
ATTGATGTGAATGGAAAGAATGCGGCACCTATTTACAAGTTTCTAAAATCAGAGAAAGGAGGATTC
CTTGGAGATGCAATCAAGTGGAATTTTACCAAGTTTCTGGTTAATAAAGAAGGGAAGGTTGTAGAGAGATATGCTCCTACAACATCACCTCTTAAGATCGAGGTTGGAACAACGATTCCT
CTTTGA

Retrieve as FASTA