Entry information : StGPx05
Entry ID 5726
Creation 2007-08-15 (Christophe Dunand)
Last sequence changes 2007-08-15 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2007-09-04 (Gregory Theiler)
Peroxidase information: StGPx05
Name StGPx05
Class Plant glutathione peroxidase    [Orthogroup: Gpx2002]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Solanum tuberosum (Potato)    [TaxId: 4113 ]
Cellular localisation N/D
Tissue type Tubers
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value StGPx05
start..stop
S start..stop
LeGPx05 339 1e-121 1..170 1..170
NtGPx04-1B 316 9.57e-113 1..170 1..170
NtGPx05-1A 308 1.19e-109 1..169 1..169
NtGPx05-1B 306 7.89e-109 1..169 1..169
Literature and cross-references StGPx05
Literature Flinn,B., Rothwell,C., Sardana,R., Griffiths,R., Lague,M., De Koeyer,D., Audy,P., Goyer,C., Li,X-Q., Wang-Pruski,G. and Regan,S. Generation of ESTs from a normalized developing potato tuber.
Cluster/Prediction ref. UniGene:   Stu.6969  Stu.6967 [Sequencing error]
Protein sequence: StGPx05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   170
PWM (Da):   %s   18869.79  
PI (pH):   %s   10.03
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGASKSVPQK SIHEFTVKDS KGKNVDLSIY KGKVLLVVNV ASKCGFTSTN YTQLTQLYNE YKDKGFEVLA FPCNQFLKQE PGTSEQAQEF ACTRFSAEYP IFQKVRVNGP NEAPVYTFLK 
ASKGGFLSKS IKWNFTKFLV DKEGQVIRRY GSTTPPLSIK ADIQKALGEN 

Retrieve as FASTA  
Remarks Complete sequence from 8 ESTs + 8 ESTs (Unigene Stu.6967 with frame shift). Cultivar="Shepody". TC from TGI does not predict the start codon but found with CV497108.