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Entry information : ZmGPx04
Entry ID 5740
Creation 2007-08-17 (Christophe Dunand)
Last sequence changes 2007-08-17 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-12-23 (Marie Brette (Scipio))
Peroxidase information: ZmGPx04
Name ZmGPx04
Class Plant glutathione peroxidase    [Orthogroup: Gpx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmGPx04
start..stop		 S start..stop
TaGPx04-1A 432 9.51e-157 1..230 1..229
SbGPx04 400 8.11e-144 1..230 1..232
OruGPx04 343 2.24e-121 5..230 15..234
OsiGPx04 338 2.24e-119 10..230 7..232
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 106959814..106960050 235 N° 2 106961523..106961599 75 N° 3 106961690..106961751 60 N° 4 106962652..106962770 117
N° 5 106962896..106963063 166 N° 6 106964341..106964370 28  
join(106959814..106960050,106961523..106961599,106961690..106961751,106962652..1 06962770,106962896..106963063,106964341..106964370)


exon

Literature and cross-references ZmGPx04
Literature Collura,K., Wissotski,M., Campos,D., Kudrna,D., Golser,W., Ashely ,E., Haller,K., Wing,R., Soderlund,C., Walbot,V. and Yu,Y. Maize Full-length cDNA Project.
Protein ref. UniProtKB:   B6U7S4  B4FR46 [5' end]  B6U7G0 [Mismatch]
DNA ref. GenBank:   AC195968.2 (68389..72948)
mRNA ref. GenBank:   EU973289
EST ref. GenBank:   EE012294
Cluster/Prediction ref. UniGene:   Zm.84644  Zm.96672
Protein sequence: ZmGPx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   230 (310)
PWM (Da):   %s   24906.96 (33845.1)  
PI (pH):   %s   10.06 (7.77) Peptide Signal:   %s   cut: 33 range:13-322
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAPSFTSLLSAANSAAAATASRLPSAAAGRASTFVRFPHHPTGWA
GASVAAPRTARKRAPGVAYATAATEKSIYDYTVKDIDGKDVPLKKFKNKVLLIVNVASQCGLTTANYTELSHIYEKYKTGFEILAFPCNQFGAQEPGSNTQIKQFACTRFKAEFPIFDVDVNGPNTAPIYKFLKSSAGGFLGDLVKWNFEKFLV
DKNGKVIERYPPTTSPFQIEKDIQKLLAA*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 6, 4 introns) and 19 + 4 ESTs. Cultivar="B73".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTCCCTCGTTCACTAGCCTCCTCTCGGCCGCGAACTCCGCCGCCGCCGCGACCGCCTCGCGGCTCCCCTCGGCCGCCGCCGGACGGGCATCCACTTTTGTGCGCTTCCCGCATCAC
CCGACGGGCTGGGCTGGGGCCTCCGTCGCGGCGCCGCGTACGGCGCGCAAGCGGGCACCCGGCGTCGCCTACGCCACCGCAGCTACCGAGAAGAGCATCTACGACTACACCGTTAAGAGG
TGGCCTATTTCTTTTGTTCTGTTGAGATTTCCGTTCGCCATGGCCCCGTAATTTTTGCTAATGGATGGCGTTGCGTTGTGACGTGGTGACATGCCTGAAGCCGTTTAAGCGGGGTTTAAC
GGAAGCACCGTCTGATTTAGTCCGGTTTTGTATCGCTGATTGTTGCGTGCTGTTACTGTATTAGGTATTGCTGGGGTGTTGTTGTTGGGTAGGTGGGGGCGTTGCAACCATAGACTGATT
GGTGTTTTTAATGTTCCCTGGCGCTGACTGTTTGATACTTTGATAATTGGCTGAAACATCCATCACGTGGATGCTATTGAAGCATTGTTTTCAAAACCAAATGTGTATGGCAATATTACT
AGCACTATCAGGGTTGCAATGTGTAGCGATCGTAGATGTTTCGTGGAATTATGTGTTCTAAGGAGTTGTCGAGGTAGGCACAAATCTGTAACCATGGGCAAATCAATTTTATGATATATT
GTTGTGGAACTTGGCTGAAGTTGGCCAAATCAGGTTAACAGAGTCAGCCAATTTTGCAGATCAGGTCCTTCTAAGGTTAGGTATCAAGGGCGCAGAGTGTTGTAGCAGTAGACTGAATGA
TTCCCCATTCTTCTTAATTTTAAGGATGCAAAGTACACTGTGCTTGTTTTCCAACTACCATTCCACGTAATTTGTAAAATGGATATTATCGTTTATTGGCATGTAATGTTAACCAACCAG
ATGGTTTGCTGAAATTTCACAGAACAAACCTTCTGATAGAAATAAGTTTGCATCTGAGTCATGCTTTAAGATGACAGTATTAAACCCACCATGGATAGTGCTGTCCAATGATGTGTTCAT
TCATGTGCATATTTTCAATTGATTGAACTTGTAAATATTTCTATATGTCCTTTCAACTTATTGGCAAATTTAAGGTGCATGCCATGTTTGAAGGTGGGCATTATAAAACATTGTTCTAGG
ACGGTATTAGGAAATTCTTGTAGCCCTAGACTTATTAGACCAGTTAACCAGCTATGCCTAGTGAATTACTTAAAATAGAAGGGTGGTTAGTTGCAGAGATATCAAAAATGCAAAATTGTA
CATGCAATACATGTCCACATAGGATCACAGTGAAATTAAAGTAAAACAAAGAGAGATTATTATGAGAAATTTTATGGGATACCATTTGTTTAGTTGTGAAATCCGAAGTTTGTGAATTTT
ATGTTTCCCTAATGCTTTTTCTCCACATGTCGTATTTTATTGCCATCTTACATACGGATACATGAAGAAATAACCTTGCAAGTGTGTAGTGTAAGGTTTTCGGGCCTGGTTTTCCTTATA
AACTCAGTCTACCCTTTTCTATCTTAATTGAAAGGCAGACCTCCTGCCACTTGCATTCAAAAAAAACATGAAGAAATTACTTTGGTACTTTATCTTAATATGAGATCGAATATGTATGCA
CTTGTATCTGAAAGAATTATTCACTTTTCAGGACATTGATGGAAAAGATGTTCCTCTTAAAAAGTTCAAGAATAAGGTGTTGCTGATTGTTAACGTTGCTTCTCAATGTGGTAATTTCAC
TGAAAAATCTTTCACCAACCACATTCTTTGTTTTTTTATGTTTGCTGGCATTTAACTTGGCATTCATCTGTGGATCTCAGTGGGTTGACAACAGCAAATTACACTGAACTATCTCATATC
TATGAGAAGTACAAGACTCAAGAGGTGTGGCAATTTACACTGAACAATGTTGTGTATACTTATCATTTTTAGGAAATCTAGACTGAACATTGTATTTCCAATTAAAGGAGTTACCAAAAG
TTAAAGTTGTTGTACCCTTTAAATTGTGTGTTTGATCCTAATTGTCTCATAAAACCACACAATCAAGACCAGCAGTTTAACTCTAATATATGCTGTTTTTCTTGTTTATGCCAATTTATG
GGATCATTCAATTAGACCTCTTGTTATTATATAGTGACCTTTTTGTTTGTCGCATATATCCTGGCACGTATGTAACCTAGAGAGTTGGTGTGGAGAGGGAGGACTTCATGCCTCTCCCTC
TTGTATTTGTGTTTTTCTTCTATCTTAATGAAATAACACGTAGCTCTCCTGCGGAGTTCGAGAAAAAAAGTACGCCTATTCTACTGGACCATGTTGATGCATTTGCTGATTGTCCTGATT
TTTGTTGTCTAGTGGGCGTGGGTCTCGGAGGTTAAAGGTTTCTATTGCTTTTTGCAATATTTCTTGAGTCATCTAGCTTAATATATCTCTGTGGGCGAGGACCCACATTGAGCCTAGCCA
GGGCAGGCCCACACTCATTATTCTGTTTAAGTGGACATTGGGCCTTGTTTACGGTAGGTGTAAAAGCACAGTAGTTACCAGACCCTTGCTTGTTTTTTGGGCTGGTCTGCCCTTAGTGTG
TACAGTCATTCCAAATGTTGTCGTCATGAAGAGGATCCTCCTGGACTCTACAGTTAGTTTCAAAAGTCAACTTTAGAGTTTTGATGCACATTCTCTTAGATACATGAAAAGGAAATGTTG
ATGTTAGCACGAACCTTGACTTCTTGGGCTAATAGTTGCCATTTTACATTGTGTTGTTTAATAGTTAATCTATTTGACATGTAGGGTTTGAGATCCTTGCATTTCCTTGCAATCAATTTG
GTGCACAAGAACCTGGATCAAATACTCAGATTAAGCAGTTTGCATGTACAAGATTCAAAGCTGAATTTCCGATTTTTGACAAGAGGTATGCTGATTGCAGGCAGTTCAGTCATTTGTTCC
ATAGTTTATCCTGCTTAACATTATCTGACTTTACAAATAAAAAAATATTTGTGCATGATGTATCTTTTGTTCTTCTTTCTACAATTTCAGGTTGATGTCAATGGACCTAATACAGCTCCC
ATCTATAAATTTCTGAAGTCCAGTGCAGGAGGATTTTTGGGTGATCTCGTGAAATGGAATTTTGAGAAGTTCTTAGTGGATAAGAATGGCAAAGTCATTGAGAGATATCCACCAACAACT
TCACCTTTCCAGATTGAGAGGTGTGTGATTACATCTCTAGCTTTCTACAGCACACCTTCTTTGTTTGTATATTCAGTCTATTTTTGGACTCTGTTGCTCAAAATGAACATTTTCTTCTTT
TCCATATGGTTATAAAGGCTGATAGATACTTAATTAGGTGATGAATACTTAATTACATATGCCTATGCAGTGCTATCAATCATTCATTTCCCTATTAAGTAGTGATCTTGTGAGCATATC
ATGTGTCAATTAAGCGGAAGCATGCAATCTTAATATCTATAACCTATGAAACATTTTTGAATAATCAATGAAACTAAGAACTAAATCAATCTGTACTCGACAGTTGGTTTTTGTGTATTA
AATTTGAAACAAAAAGATAGAAAAAACAACCACCTGTGGACCCAATAAATAATAATAGATTTTGTGTACATCACGTTTAGGGATGATGACTTCGACAAACATCTTTTGGAGTGTCATTTA
ACACGTTTTGCTCATAAAGTTGCTTTACTGATCAGCTTGAGGAATGGCATTTTAAATTTTTCTTGAGGCTTGGTGCTTGGTACACCAATAGCACAGAAAGTATTCGATAGGTAGGCAACT
AGGGTGCTGTGCATCCACCTGAAATCATCAACCTTGTCACATTTGGGCTTCAATTGTTAACTCTTTGGCCCTACAAGGCTATAACAGAGAGCTTCATATGGAATTTCCAAGTGGCTCTAG
TAGTCGTGTTTGGCAGTGCTGACGAATAGAATGTGCCTATGAAAAGACTTTTTCAATGACAGTGCTCATCAATTCGTGATAATTCTAATACATGAGTTACCCATGCTCAAGCAGCCCTGT
GCCAACGGTGGCATTAAGATTGTTTTGCTCTAGGGGAGACTTTTACTGATGTTCTGGAGCTCGCTTTGTCAAAAGAAGCATCCAGTGTTGGCTTTGGTATAAAATATTCTCAAGTTGCAG
TAATGGATCAGTTCTAGACTTCCATCGTGTTTTGTGCTGTCAGCAAAAAAAAAAAATGCTTTCAACCTATTCTTTCTGTCACATTTCAGTGCATTAAGACAGCTTTGCCACACACTCATT
GGCTTCGAAATCTTTCGGTCGGTTTCAGTTTTAAAATGGCCACTTTTGTGTCTCATCGAGTCGCACGCTCACCTGACTTCTTGCGGTTATGATTTCATAGACCACTTGCTTAAGAAATAA
ATCCAAACCCTTTGTGCCGACCTCCCTGCGGTTTTCGGTTTTCATTACGATTTCACGTTGCTCACAGCCTCCTTGCTATATGATTTTATTCTTGCAGAAGGACATCCAGAAACTGCTCGC
GGCATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTCCCTCGTTCACTAGCCTCCTCTCGGCCGCGAACTCCGCCGCCGCCGCGACCGCCTCGCGGCTCCCCTCGGCCGCCGCCGGACGGGCATCCACTTTTGTGCGCTTCCCGCATCAC
CCGACGGGCTGGGCTGGGGCCTCCGTCGCGGCGCCGCGTACGGCGCGCAAGCGGGCACCCGGCGTCGCCTACGCCACCGCAGCTACCGAGAAGAGCATCTACGACTACACCGTTAAGGAC
ATTGATGGAAAAGATGTTCCTCTTAAAAAGTTCAAGAATAAGGTGTTGCTGATTGTTAACGTTGCTTCTCAATGTGGGTTGACAACAGCAAATTACACTGAACTATCTCATATCTATGAG
AAGTACAAGACTCAAGGGTTTGAGATCCTTGCATTTCCTTGCAATCAATTTGGTGCACAAGAACCTGGATCAAATACTCAGATTAAGCAGTTTGCATGTACAAGATTCAAAGCTGAATTT
CCGATTTTTGACAAGGTTGATGTCAATGGACCTAATACAGCTCCCATCTATAAATTTCTGAAGTCCAGTGCAGGAGGATTTTTGGGTGATCTCGTGAAATGGAATTTTGAGAAGTTCTTA
GTGGATAAGAATGGCAAAGTCATTGAGAGATATCCACCAACAACTTCACCTTTCCAGATTGAGAAGGACATCCAGAAACTGCTCGCGGCATAA

Retrieve as FASTA