Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
349 (359) |
PWM (Da): |
37896.22 (37429.2) |
|
PI (pH): |
8.92 (4.10) |
Peptide Signal: |
cut: 19 range:19-377 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MTSSSATLSF SSFSSTSALS LSKFRFKFPS FSRTSSLSSR AKPFTASSST TTHNISGEIR HCSLSRRRGL AFTATLPFLL PLHEFVDSVA AKAVESGSGQ SEYMRIKEEI IKVVTKGKAA
GVLRLVFHDA GTYEMDENSG GMNGSIVYEL ERPENAGLKK SLKVLEKAKK EIEAIQSVSW ADMIAVGGAE AVSICGGPKI PVTLGRLDSG EPDPEGKMPE ESLDASGLKQ CFRRKGFSTQ
ELVALSGAHT LGSKGFGSPV AFDNSYFKIL LEKPWKSSAG MTSMIGLPSD RAIVEDDECL RWITKYADDQ NMFFEDFKNA YMKLVNCGAK WKSKHSLHVL SPSLHVLSP*
|
Retrieve as FASTA
|
|
Remarks |
Complete sequence from 7 ESTs. Cultivar="des119". |
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACGAGTT CATCAGCAAC CTTAAGCTTC TCTTCATTTT CTTCAACCTC AGCCCTATCT TTATCTAAAT TCAGATTCAA ATTTCCCTCC TTTTCACGAA CCTCCTCTCT CTCATCTCGC
GCCAAGCCAT TCACCGCTTC TTCTTCCACC ACCACCCACA ACATCTCAGG AGAAATTCGC CATTGCAGTT TGAGTAGGAG GAGAGGGCTG GCTTTTACTG CAACGCTACC GTTTCTTCTT
CCTCTGCATG AATTTGTAGA CTCTGTTGCC GCTAAGGCAG TTGAGTCAGG TTCAGGTCAA AGCGAGTATA TGCGTATAAA GGAAGAGATA ATTAAAGTAG TAACAAAGGG AAAGGCTGCT
GGTGTTCTTC GTTTGGTATT TCATGATGCT GGAACCTATG AAATGGATGA AAATTCAGGT GGTATGAATG GTTCCATAGT TTATGAACTC GAAAGACCTG AAAATGCGGG CCTCAAGAAA
TCTCTGAAGG TTCTAGAGAA AGCCAAGAAA GAAATCGAAG CTATACAATC AGTATCATGG GCAGACATGA TTGCTGTTGG TGGAGCTGAA GCTGTTTCCA TTTGCGGAGG TCCGAAAATC
CCAGTTACAT TAGGCCGACT AGATTCTGGG GAGCCAGACC CTGAAGGTAA GATGCCTGAA GAGTCTCTGG ATGCTTCTGG CTTGAAGCAG TGTTTTCGAC GAAAGGGCTT CTCAACACAA
GAACTAGTTG CTCTGTCTGG GGCGCATACT CTTGGCAGTA AAGGTTTCGG AAGTCCGGTT GCTTTCGATA ACTCGTACTT CAAAATTCTT CTGGAGAAAC CATGGAAATC CTCTGCTGGT
ATGACAAGCA TGATCGGACT TCCTTCAGAC CGTGCCATTG TAGAGGACGA CGAATGCTTA AGGTGGATCA CAAAATATGC AGACGACCAG AATATGTTCT TTGAAGATTT TAAGAATGCA
TATATGAAAC TAGTCAATTG TGGTGCAAAG TGGAAGAGCA AACATTCTCT TCATGTTTTG TCTCCTTCTC TTCATGTCTT GTCTCCTTGA
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GAACCACCCA TTTTGAAACC TTCAATAGAA GAAGATGACG AGTTCATCAG CAACCTTAAG CTTCTCTTCA TTTTCTTCAA CCTCAGCCCT ATCTTTATCT AAATTCAGAT TCAAATTTCC
CTCCTTTTCA CGAACCTCCT CTCTCTCATC TCGCGCCAAG CCATTCACCG CTTCTTCTTC CACCACCACC CACAACATCT CAGGAGAAAT TCGCCATTGC AGTTTGAGTA GGAGGAGAGG
GCTGGCTTTT ACTGCAACGC TACCGTTTCT TCTTCCTCTG CATGAATTTG TAGACTCTGT TGCCGCTAAG GCAGTTGAGT CAGGTTCAGG TCAAAGCGAG TATATGCGTA TAAAGGAAGA
GATAATTAAA GTAGTAACAA AGGGAAAGGC TGCTGGTGTT CTTCGTTTGG TATTTCATGA TGCTGGAACC TATGAAATGG ATGAAAATTC AGGTGGTATG AATGGTTCCA TAGTTTATGA
ACTCGAAAGA CCTGAAAATG CGGGCCTCAA GAAATCTCTG AAGGTTCTAG AGAAAGCCAA GAAAGAAATC GAAGCTATAC AATCAGTATC ATGGGCAGAC ATGATTGCTG TTGGTGGAGC
TGAAGCTGTT TCCATTTGCG GAGGTCCGAA AATCCCAGTT ACATTAGGCC GACTAGATTC TGGGGAGCCA GACCCTGAAG GTAAGATGCC TGAAGAGTCT CTGGATGCTT CTGGCTTGAA
GCAGTGTTTT CGACGAAAGG GCTTCTCAAC ACAAGAACTA GTTGCTCTGT CTGGGGCGCA TACTCTTGGC AGTAAAGGTT TCGGAAGTCC GGTTGCTTTC GATAACTCGT ACTTCAAAAT
TCTTCTGGAG AAACCATGGA AATCCTCTGC TGGTATGACA AGCATGATCG GACTTCCTTC AGACCGTGCC ATTGTAGAGG ACGACGAATG CTTAAGGTGG ATCACAAAAT ATGCAGACGA
CCAGAATATG TTCTTTGAAG ATTTTAAGAA TGCATATATG AAACTAGTCA ATTGTGGTGC AAAGTGGAAG AGCAAACATT CTCTTCATGT TTTGTCTCCT TCTCTTCATG TCTTGTCTCC
TTGATTGGTC AAGACTCAGC AGGAAACTGT TGTGTAACAG ATGAATAAAA GGAGGATTTA TGCATACATT
|
Retrieve as FASTA
|
|