Entry information : PsiAPx-R01(PSI00012237)
Entry ID 5760
Creation 2007-08-22 (Christophe Dunand)
Last sequence changes 2010-08-09 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-01-05 (Christophe Dunand)
Peroxidase information: PsiAPx-R01(PSI00012237)
Name PsiAPx-R01(PSI00012237)
Class Ascorbate peroxidase related    [Orthogroup: APx-R001]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea sitchensis (Sitka spruce)    [TaxId: 3332 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PsiAPx-R01
start..stop
S start..stop
PgAPx-R01 621 0 1..365 1..333
PabAPx-R01 616 0 1..365 1..333
PtaAPx-R01 481 8e-173 106..365 1..284
GbAPx-R01 424 2e-149 95..363 56..348
Literature and cross-references PsiAPx-R01(PSI00012237)
Literature Ralph,S., Kolosova,N., Oddy,C., Chun,E., Reid,K.E., Liao,N., Jancsik,S., Moore,R., Mayo,M., Wagner,S., King,J., Yanchuk,A., Holt ,R., Jones,S., Marra,M., Ritland,C.E., Ritland,K. and Bohlmann,J. Expressed sequence tags from multiple Spruce cDNA libraries.
EST ref. GenBank:   DR528584.1 [5' end]   ES863371.1 [3' end]
Cluster/Prediction ref. UniGene:   Psi.14898
Protein sequence: PsiAPx-R01(PSI00012237)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   365
PWM (Da):   %s   40424.6  
PI (pH):   %s   7.87
Sequence
Send to BLAST
Send to Peroxiscan
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MTQMQVFLIC LRNRFNSLPM GARGIIWSEL GMKAKKITIA ASDSNGCSRQ EIPFGTHSRR MMLLLTASLP VMSIQNDLQF FTSNNKFNIH AAITIAASDS NGCSRQEIPF GTHSRRMMLL  LTASLPVMSI QNDLQFFTSN NKFNIHAAGL LRLVFHDAGT FNMAKNTGGM NGSIIYELDR PANAGLDRSV KVLEKVKAVL DLIMQVSWAD LIALAGVEAL ALCGGPIILI KLGRQDTKSP  DPDGELPAES LNASDLKECF QRKGFSVQEL VALSGAHTLG NKGFGNPTIF DNSYFQILLE RPWIKTSKGN EMETMIGLPS DHALVEDDEC LRWITIYANN QEKFFDDFAR AYVKLINSGV 
HWRTL* 

Retrieve as FASTA  
Remarks Complet sequence from genomic (incorrect prediction) and 1 EST. Cultivar="FB3-425". 5'end is missing.
cDNA
Send to BLAST
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GGGTTGTTGC GGCTGGTGTT TCATGATGCA GGCACTTTCA ATATGGCCAA GAACACAGGT GGTATGAATG GATCCATAAT TTACGAACTT GATAGGCCTG CAAATGCAGG TCTTGACCGC  TCAGTAAAGG TCCTAGAAAA AGTAAAGGCA GTGTTGGATT TGATCATGCA AGTGTCATGG GCAGACCTTA TAGCTTTGGC TGGTGTTGAA GCATTGGCAC TTTGTGGTGG CCCTATCATT  CTTATCAAAC TAGGAAGGCA AGATACAAAG TCACCTGATC CAGATGGGGA ACTTCCAGCA GAATCTCTCA ATGCATCTGA TCTGAAGGAA TGCTTCCAGA GGAAAGGCTT CTCGGTACAA  GAGCTTGTTG CATTATCTGG TGCTCACACA CTGGGGAATA AAGGTTTTGG AAACCCTACG ATTTTTGACA ACTCATACTT TCAAATACTT CTAGAAAGAC CTTGGATAAA AACAAGTAAA  GGAAATGAGA TGGAAACTAT GATAGGGCTT CCCTCTGATC ATGCTCTTGT TGAGGATGAT GAGTGCCTTA GGTGGATAAC AATATATGCA AACAACCAAG AAAAATTCTT TGATGATTTT  GCTAGAGCTT ACGTGAAACT TATTAATAGT GGTGTTCATT GGAGAACTCT TTAGGATTCC ACCTTTCCTT CTAATGATTG TCATTTAATT TGTCTTAATA TGTGAACAAC ATCTACAAAA 
TTACAATATA ATTTGTTAAC ATTGTTTGAA AAGATAAAAA AAAAAAAAAA AGAGCTCTT 

Retrieve as FASTA