Entry information : EcabLPO
Entry ID 5807
Creation 2007-09-21 (Marcel Zamocky)
Last sequence changes 2011-08-16 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-08-16 (Christophe Dunand)
Peroxidase information: EcabLPO
Name EcabLPO
Class Lactoperoxidase    [Orthogroup: LPO001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Equidae Equus
Organism Equus caballus    [TaxId: 9796 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcabLPO
start..stop
S start..stop
AImeLPO 1304 0 1..711 6..717
MmulLPO-B 1297 0 1..711 1..712
PpyLPO 1296 0 1..711 1..712
HsLPO 1296 0 1..711 1..712
Gene structure Fichier Exons


exon

Literature and cross-references EcabLPO
Literature PREDICTED: Equus caballus similar to Interleukin 20 receptor, alpha
(LOC100056877), mRNA. Unpublished (in June 2007)
Protein ref. GenBank:   XP_001503735.1
DNA ref. GenBank:   NC_009154.2 (32509928..32533272)
mRNA ref. GenBank:   XM_001503685 (1..2136)
Protein sequence: EcabLPO
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   711 (688)
PWM (Da):   %s   80098.89 (77758.5)  
PI (pH):   %s   8.21 (8.09) Peptide Signal:   %s   cut: 24 range:24-711
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRVLVHLPALLASLTLLQAAASATREQSPTTAAISDAVNQVKVQVNKAFLESRTRLKTALSSESPSTRQLSEYLKHAKGRTRTAIRTGQVWEDSLKRLRRKATLTNADPSLDLTALSSEVGCGASVPVVECDAHSPYRTITGDCN
N
RRNPALGAANRALARWLPAEYEDGLSLPFGWTPSKTRNGFTLPAREVSNQIMGYLTEDVLDHNRPLLFMQWGQIVDHDLDFAPETELGSSEYSKEQCDAYCIQGENCFPIMFPPNDPKL
KTQGKCMPFFRAGFVCPTPPYQSLAREQINALTSFLDASFVYGPEPSLASRLRNLSSPLGLMAVNQEVWDHDLAYMPFDNKKPSPCEFINTTAHVPCFLA
GDSRASEQILLAASHTLFLR
EHNRLARELKRLNPQWDGEKLYQEARKILGAFV
IITFRDYLPIVLGDEMQKWIPPYQGYNKYVDPRISNVFTSAFRFGHLEVPSTVFRLDENYQPWGPEPELPLHTLFFNTWRIVKDGGI
DPLVRGLLAKKSKLMNQNKMMTGELRNKLFQPTHKIHGFDLAAINIQRSRDHGMP
GYNSWRGFCDLSQPQTLEELDAVLKNKRLAKKLLDLYRTPDNVDIWVGGIAEPLVERGRVGPLLA
CLLGKQLQQIRDGD
RFWWENPGVFTEKQRDSLQKVSFSRLVCDNTHITKVPVDPFRANHYPHGFVDCSAIDKLDLSPWASVEN

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 11, 11 introns).
DNA
Send to BLAST
CDS
Send to BLAST