Entry information : GmPrx[P]82
Entry ID 581
Creation 2011-11-10 (Qiang Li)
Last sequence changes 2011-12-14 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2011-11-28 (Qiang Li)
Peroxidase information: GmPrx[P]82
Name GmPrx[P]82
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx[P]82
start..stop
S start..stop
GmPrx105 248 5e-84 1..141 192..332
GmPrx[P]219 241 1e-82 1..140 106..245
GmPrx[P]75 227 2e-78 1..141 1..135
GmPrx[P]246 220 2e-74 1..136 90..226
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 11704140..11704560 421  
complement(join(11704140..11704560))


exon

Literature and cross-references GmPrx[P]82
DNA ref. Phytozome 12:   Gm04 (11704560..11704140)
Protein sequence: GmPrx[P]82
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   141
PWM (Da):   %s   16431.55  
PI (pH):   %s   9.78
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
SHTIGRPRCL SFRLRVYDAK EEYDYGYDDY KRYKSFARIL QSICPIEGRD KKFAPLDFQx PKRFDNYYFI NILEGKGLLV LYNVLIIHDL HGKITEQVRA YASNEKLLFA SFAKSMIKMG 
NINVLTRNEG EIRRNCRFVN A 

Retrieve as FASTA  
Remarks Pseudogen sequence from genomic. Incorrect prediction from phytozome. Only the last exon containing a frame shift. The first exons have not been found. No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AGCCATACTA TAGGAAGACC AAGATGTCTA AGCTTCAGGT TGAGGGTATA TGATGCAAAA GAGGAATATG ACTATGGCTA TGATGACTAC AAACGATACA AAAGTTTCGC GAGAATCTTG  CAGTCCATAT GCCCTATTGA GGGAAGGGAC AAAAAATTTG CACCCTTGGA TTTTCAAAnn CCAAAAAGAT TTGACAATTA CTACTTCATA AATATTCTTG AAGGGAAAGG CTTGTTAGTT  TTATACAATG TTCTTATCAT CCATGACTTA CATGGAAAGA TTACAGAGCA GGTGCGGGCT TATGCCTCTA ATGAAAAACT TTTGTTTGCT TCATTTGCTA AATCTATGAT TAAGATGGGA 
AACATCAATG TTCTTACAAG AAATGAGGGG GAAATTAGGA GGAATTGTAG GTTTGTCAAT GCT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AGCCATACTA TAGGAAGACC AAGATGTCTA AGCTTCAGGT TGAGGGTATA TGATGCAAAA GAGGAATATG ACTATGGCTA TGATGACTAC AAACGATACA AAAGTTTCGC GAGAATCTTG  CAGTCCATAT GCCCTATTGA GGGAAGGGAC AAAAAATTTG CACCCTTGGA TTTTCAAAnn CCAAAAAGAT TTGACAATTA CTACTTCATA AATATTCTTG AAGGGAAAGG CTTGTTAGTT  TTATACAATG TTCTTATCAT CCATGACTTA CATGGAAAGA TTACAGAGCA GGTGCGGGCT TATGCCTCTA ATGAAAAACT TTTGTTTGCT TCATTTGCTA AATCTATGAT TAAGATGGGA 
AACATCAATG TTCTTACAAG AAATGAGGGG GAAATTAGGA GGAATTGTAG GTTTGTCAAT GCT 

Retrieve as FASTA