Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
141 |
PWM (Da): |
16431.55 |
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PI (pH):
| 9.78 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
SHTIGRPRCL SFRLRVYDAK EEYDYGYDDY KRYKSFARIL QSICPIEGRD KKFAPLDFQx PKRFDNYYFI NILEGKGLLV LYNVLIIHDL HGKITEQVRA YASNEKLLFA SFAKSMIKMG
NINVLTRNEG EIRRNCRFVN A
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Retrieve as FASTA
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Remarks |
Pseudogen sequence from genomic. Incorrect prediction from phytozome. Only the last exon containing a frame shift. The first exons have not been found. No EST. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
AGCCATACTA TAGGAAGACC AAGATGTCTA AGCTTCAGGT TGAGGGTATA TGATGCAAAA GAGGAATATG ACTATGGCTA TGATGACTAC AAACGATACA AAAGTTTCGC GAGAATCTTG
CAGTCCATAT GCCCTATTGA GGGAAGGGAC AAAAAATTTG CACCCTTGGA TTTTCAAAnn CCAAAAAGAT TTGACAATTA CTACTTCATA AATATTCTTG AAGGGAAAGG CTTGTTAGTT
TTATACAATG TTCTTATCAT CCATGACTTA CATGGAAAGA TTACAGAGCA GGTGCGGGCT TATGCCTCTA ATGAAAAACT TTTGTTTGCT TCATTTGCTA AATCTATGAT TAAGATGGGA
AACATCAATG TTCTTACAAG AAATGAGGGG GAAATTAGGA GGAATTGTAG GTTTGTCAAT GCT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
AGCCATACTA TAGGAAGACC AAGATGTCTA AGCTTCAGGT TGAGGGTATA TGATGCAAAA GAGGAATATG ACTATGGCTA TGATGACTAC AAACGATACA AAAGTTTCGC GAGAATCTTG
CAGTCCATAT GCCCTATTGA GGGAAGGGAC AAAAAATTTG CACCCTTGGA TTTTCAAAnn CCAAAAAGAT TTGACAATTA CTACTTCATA AATATTCTTG AAGGGAAAGG CTTGTTAGTT
TTATACAATG TTCTTATCAT CCATGACTTA CATGGAAAGA TTACAGAGCA GGTGCGGGCT TATGCCTCTA ATGAAAAACT TTTGTTTGCT TCATTTGCTA AATCTATGAT TAAGATGGGA
AACATCAATG TTCTTACAAG AAATGAGGGG GAAATTAGGA GGAATTGTAG GTTTGTCAAT GCT
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Retrieve as FASTA
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