Entry information : GmPrx13 (Glyma18g06230.1)
Entry ID 583
Creation 2006-06-22 (Christophe Dunand)
Last sequence changes 2011-10-12 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-12-13 (Qiang Li)
Peroxidase information: GmPrx13 (Glyma18g06230.1)
Name (synonym) GmPrx13 (Glyma18g06230.1)
Class Class III peroxidase    [Orthogroup: Prx011]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue type Roots nodules
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx13
start..stop
S start..stop
GmPrx70 513 0 17..322 19..325
GmPrx62 510 0 1..322 33..359
GmPrx120 507 0 1..322 1..323
GmPrx40 499 5e-180 1..322 1..329
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4815284..4815493 210 N° 2 4816296..4816490 195 N° 3 4817063..4817623 561  
join(4815284..4815493,4816296..4816490,4817063..4817623)


exon

Literature and cross-references GmPrx13 (Glyma18g06230.1)
Literature Public Soybean EST Project.
DNA ref. Phytozome 12:   Gm18 (4815284..4817623)
Protein sequence: GmPrx13 (Glyma18g06230.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   322
PWM (Da):   %s   35034.98  
PI (pH):   %s   8.73
Sequence 363
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASHHLQYLVLAIATLLTISSHAQLTPDFYNNVCPQALPIIKSVVQRAIFRERRIGASLLRLHFHDCFVNGCDGSILLDDTPNFTGEKTALPNINSIRGLEVVDEIKAAVDRACKRPVVSCADILAVAARDSVSILGGSLYWYKVLLGRRDSRTASKDAANSNLPPPFFSLSQLLSSFQSHGLDLKDLVALSGAHTIGFAQCATFRNRIYNDTNIDPNFASSLQGTCPRSGGDSNLAPLDRFSPSRVDTSYYTSLLSKKGLLHSDQELFKGDGGESDTLVKLYSRNPFAFARDFKASMIKMGNMKPLIGNAGEIRVNCRSVN

Retrieve as FASTA  
Remarks Complete sequence from genomic and 4 ESTs. Cultivar="Williams".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGCTTCTCATCATCTCCAATATCTTGTGCTTGCCATAGCCACACTTCTCACAATCTCTTCACATGCACAACTCACTCCTGATTTTTACAACAATGTTTGCCCTCAGGCACTGCCTATCA
TTAAGTCAGTTGTTCAACGAGCAATATTTCGTGAACGGCGCATTGGAGCATCTTTACTTCGTTTGCACTTCCATGACTGTTTTGTCAAT
GTGAGTTACATATCCCTGACATGCATGCTGT
CATGAGAATTTTTCCTAACCAATATATTCATGCATGCAGTAATCTTTCCTACTACATTTAGTAATCCTCTTTACAAAATGTATAAAGTAGTGTAAAACAAAGTGATGTAAAATAAATATA
TAGTAGAAAAATGTTTGCAACACACGTTCCACTCTCTTATTGCATAAAGTTTATTGAAAGTGAAAAAAATTGTGATACCACATCATATTTAATATTTTATCTTGATTAATTTTGTAATTT
TTATTAAATTTTAACCTATTAAAAAGAATGTATTTAAAGAATTAATGTGTTAGAGAATATATTCCAAACACTCCCCTAAATATAATTTTAGAAAAGAACTTNNNNNNNNNNNNNNNNNNN
NNCTTCAAATGGTAATCTTGTCCAGCCTTGTTTTCTAGATGTTGCTAATGCAAAAACCTTAATTTCATTCATTATAATTGTCTCTGACTTTTGTTTTCCTCCCTTATTGATAACCAAATT
AAACTTATACTTCATTTTCAAGCCAAGTTGACTAGGCCAAGTTAATTGATTTCATTTACAGTTATTTTTCATTGTAAACATGAAATTTTTAGTTTAAACTTCGTACGCGGCAAAATGATA
AACGAGGAAAGGTAGTCCAAGTCAGAACCCATATATAGCAGAAAGTTTAGTGAACTTTCTAATGGATGCAACCATTCATGATAAATTTAAAAATTTAATGCATGCAACCATATTTATAAT
ATATATTATTATGACCTGAAAGCAATTAATGTCTATGGCTGCAAATTATAGGGCTGTGATGGATCAATTCTGCTGGATGACACCCCCAACTTCACTGGGGAGAAGACTGCCCTTCCAAAT
ATTAACTCAATAAGAGGTTTGGAGGTGGTTGATGAAATTAAAGCAGCCGTTGACAGAGCTTGCAAACGTCCCGTGGTATCATGTGCAGATATCTTAGCTGTAGCCGCTCGTGATTCTGTG
TCCATA
GTAAGTGTCATACTAATCTTAATTTTATTCTCACACTTCACGAAAAAATTGTGTTTCACTTCTCTTTAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNAAAGAAAGGTGTTTTAAAAAAAGAAGTGGTGTAAAAAAATAAGGAAAAATGATAGATATACATTACATTTTTTAGGTGAAAGAAAGAGAGAAACAAAGAATAA
AAAATATAGTAAAGGAAAATACTAAACATACACTCTAAAAATGGGGTGTGTGAACGAAAAGAAGAAAAAGACATGAGCAAAAATAAAGTGAGAAAAATATAATAAATGTTGCGAGGATAA
ATGAAGAAAAAAAATAAGATAAAAATGAAATGAAAGAGTTGAAAAGTGATTGTATAATAATATTTTTATAATTGGCAATGCATGTGATATAATGATAAAGAAAGAAATACATAGANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTATGAATATTATTGATGAAAAAAATAAATCCACCTTCAAAAAGTAACGAGTGTGGTTTTCTGTAACAGTTGGGAGGCTCACTCTACTGGT
ACAAAGTGTTACTAGGCAGAAGGGATTCAAGAACTGCTAGCAAAGATGCTGCAAACTCAAATCTTCCACCCCCATTTTTCAGCCTCTCTCAGCTACTTTCAAGTTTTCAGTCTCACGGCT
TAGACCTCAAAGATCTCGTGGCTCTCTCTGGTGCACACACCATTGGATTCGCGCAATGCGCCACCTTTAGGAACAGGATCTACAATGACACCAACATAGACCCCAACTTTGCATCTTCTC
TTCAGGGTACGTGCCCTAGAAGTGGTGGAGACAGCAATCTAGCTCCGTTGGATCGTTTCTCTCCCTCAAGAGTTGACACTTCGTACTATACCTCTTTGCTGAGTAAAAAGGGTCTCCTTC
ATTCTGATCAAGAGCTCTTCAAAGGAGATGGTGGTGAGAGTGACACTTTGGTGAAGCTCTACAGCAGGAACCCTTTTGCTTTTGCTAGAGATTTTAAGGCTTCCATGATCAAGATGGGTA
ACATGAAGCCTCTTATTGGGAATGCTGGAGAGATCAGAGTCAATTGTAGAAGTGTCAAC

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGCTTCTCATCATCTCCAATATCTTGTGCTTGCCATAGCCACACTTCTCACAATCTCTTCACATGCACAACTCACTCCTGATTTTTACAACAATGTTTGCCCTCAGGCACTGCCTATCA
TTAAGTCAGTTGTTCAACGAGCAATATTTCGTGAACGGCGCATTGGAGCATCTTTACTTCGTTTGCACTTCCATGACTGTTTTGTCAAT
GGCTGTGATGGATCAATTCTGCTGGATGACA
CCCCCAACTTCACTGGGGAGAAGACTGCCCTTCCAAATATTAACTCAATAAGAGGTTTGGAGGTGGTTGATGAAATTAAAGCAGCCGTTGACAGAGCTTGCAAACGTCCCGTGGTATCAT
GTGCAGATATCTTAGCTGTAGCCGCTCGTGATTCTGTGTCCATA
TTGGGAGGCTCACTCTACTGGTACAAAGTGTTACTAGGCAGAAGGGATTCAAGAACTGCTAGCAAAGATGCTGCAA
ACTCAAATCTTCCACCCCCATTTTTCAGCCTCTCTCAGCTACTTTCAAGTTTTCAGTCTCACGGCTTAGACCTCAAAGATCTCGTGGCTCTCTCTGGTGCACACACCATTGGATTCGCGC
AATGCGCCACCTTTAGGAACAGGATCTACAATGACACCAACATAGACCCCAACTTTGCATCTTCTCTTCAGGGTACGTGCCCTAGAAGTGGTGGAGACAGCAATCTAGCTCCGTTGGATC
GTTTCTCTCCCTCAAGAGTTGACACTTCGTACTATACCTCTTTGCTGAGTAAAAAGGGTCTCCTTCATTCTGATCAAGAGCTCTTCAAAGGAGATGGTGGTGAGAGTGACACTTTGGTGA
AGCTCTACAGCAGGAACCCTTTTGCTTTTGCTAGAGATTTTAAGGCTTCCATGATCAAGATGGGTAACATGAAGCCTCTTATTGGGAATGCTGGAGAGATCAGAGTCAATTGTAGAAGTG
TCAAC

Retrieve as FASTA