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Entry information : CintDuOx01 (DuOxB)
Entry ID 5857
Creation 2007-10-25 (Christophe Dunand)
Last sequence changes 2007-10-25 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2007-10-25 (Christophe Dunand)
Peroxidase information: CintDuOx01 (DuOxB)
Name (synonym) CintDuOx01 (DuOxB)
Class Dual oxidase    [Orthogroup: DuOx001]
Taxonomy Eukaryota Metazoa Chordata Ascidiacea Cionidae Ciona
Organism Ciona intestinalis    [TaxId: 7719 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CintDuOx01
start..stop		 S start..stop
SscDuOx02 1294 0 2..1494 39..1545
RnoDuOx01 1290 0 2..1494 33..1551
MmDuOx01 1286 0 2..1494 33..1551
MmDuOx02-4 1281 0 2..1494 39..1517
Literature and cross-references CintDuOx01 (DuOxB)
Literature REFERENCE 1: Kawahara,T., Quinn,M.T. and Lambeth,J.D. Molecular evolution of the reactive oxygen-generating NADPH oxidase (Nox/Duox) family of enzymes BMC Evol. Biol. 7, 109 (2007)

REFERENCE 2: Birney, E., Andrews, D., Caccamo, M., Chen, Y. et al. "Ensembl 2006" Nucl. Acids. Res. 34 (Database issue) D556-D561 (2006)
Protein ref. GenBank:   FAA00329.1 [Fragment]
DNA ref. GenBank:   AABS01000162 (77617..93024)
mRNA ref. GenBank:   BR000262 [Fragment]
Protein sequence: CintDuOx01 (DuOxB)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1494 (300)
PWM (Da):   %s   170751.59 (32683.9) Transmb domain:   %s   o561-583i986-1008o1023-1045i1092-1114o1129-1151i1158-1180o1185-1204i
PI (pH):   %s   7.4 (9.24) Peptide Signal:   %s   cut: 28 range:28-327
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDGWYNNLDH PQWGSPGERM IRRSTNGYSN GINKPMEDGL PNPHTLSRLL MRGESGIPSV TGKSVFLAFF AGQHVGDDMI DSRRNACPSE YINIEIEENK ESNNHILPMY RSKFITGSGS  SVNSPRMLVN EATSWLDGSV IYGNSHSWSE HLRSFERGRL KEEDGHPGYP SFNRNEIPLY NPTIDLKRPP KTRNPEELLS FGNPRGNENP FLMTIEIIWF RWHNHLAEKI AVQNPDWSDQ  QIFDKARKWT IATYQNIAFY EWLPEIIGTS PPPYREYNKF MLPSVSVEFS IAAMRLGHSL VPSGVVLRQP DCSPIDPLPE DYLASAGEPA LRLCNTYWQL QDALLDLGIE GIVLGMTSQN  AEEEDAVVVD DLAGFLYGPL KRTRMDLEAM TIQRGRDAGL QRYNEVRKTY DLPPITDFSQ LNPSLPNEVI ARLRNAYNND TNKLELYVAG MMEDRSNASN VLFYKIILEQ FQRTRDGDRL  WFENAQNGLF NASELQEIRQ TTMRDIIAAT TTFNRSLFQP NVFNTAGSRC ASITVRKDMF SKSCTPNTGI DFFYGYWGKY AGIVVLLLLF PFVSYFVMCM IAWKRQYDLA KAKKIATQKV  TRRKSSSQNE AEIESEDGAV FSGGQDKSRR VVVMLEGTCI KLFSSAGREL RKICFSHFKK SFLFMSRNKR KDLIVIRVPK EYDVVLRFND SLERVEAIKN VQEFMQHNGV NVDVFEMDES  ALKEEAVTKE ARQALLETFL RQTFAEALNI DDAVEQNSKA KYRHKTMEVA DCELTQMELA ETMGMKPDSL FVTQMFQLAD TDHSGYLSFR EFADLIILLM NGSPEQKAKM LFDMYDVDHS  GEINREEGRN MIKSFLEMAG ANLGPDEVSA AVSTIFKEAG IGENKDSLTL EDFTYVLLKD HREAFESSEL SMPGRSNLYK DQGELSEQNK MSDQRRVDKA KIIFYQKMVQ SNGKVFSDAT  VSHEEKTWFA RTWKYLKRNV ENYRRHIFCM VIFYGITIAL VVERATFYAF GAEHIGIRRV TEWGIIISRA SAAAISFHFS FILLTMSRNL ITTCRETFLK NFIPFDSAVA FHKQIAYVAL  VETIFHVLGH ASNFYHFCVH PLPVLACLFP KIFVDDGSDL PKSLTWWFFE TITGLTGVLL LLTISIIYVF AMQYSRRFCF RAFWITHHLY TVLYILTILH GSLGIVQAPV FHFYLVVPVV  IFLIDKMITI SRSKVQITVI KAEALPSGVL NLVFKRPVAF DYQSGQWVRI ASLSLGTNEY HPFTLTSAPH ERYLSLHIRS VGPWTSNLRN LYQTAVEHQG KLPNLYLDGP FGEGHQDWYK  YEVSVLVGAG IGVTPFASIL KDIVNRTSTK KGSHIPCKKI YFIWVTRTQR HFEWLTDIIR ELEETAGGDL VSTHIYITQF ANKYDLRTTM LYICERYFQK VANKSMFTGL KAITHFGRPQ 
FEAFLDSLQT KHKEVRTLGV FSCGPPGLTN GVEDACRNLN KLNKARFNHF YENF 

Retrieve as FASTA  
Remarks Partial sequence from genomic (chromo 1, 32 introns) and 22 ESTs (only 3'end).