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Entry information : EcoDyPrx01_UTI89 (ycdB)
Entry ID 5872
Creation 2007-10-19 (Christophe Dunand)
Last sequence changes 2007-10-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2007-10-22 (Christophe Dunand)
Peroxidase information: EcoDyPrx01_UTI89 (ycdB)
Name (synonym) EcoDyPrx01_UTI89 (ycdB)
Class DyP-type peroxidase A    [Orthogroup: DyPrxA001]
Taxonomy Bacteria Proteobacteria Gammaproteobacteria Enterobacteriaceae Escherichia
Organism Escherichia coli    [TaxId: 562 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcoDyPrx01_UTI89
start..stop		 S start..stop
EcoDyPrx01_536 872 0 1..423 1..423
EcoDyPrx01_APECO1 872 0 1..423 1..423
SsoDyPrx01 867 0 1..423 1..423
SboDyPrx01 867 0 1..423 1..423
Literature and cross-references EcoDyPrx01_UTI89 (ycdB)
Literature Chen S.L., Hung C.-S., Xu J., Reigstad C.S., Magrini V., Sabo A., Blasiar D., Bieri T., Meyer R.R., Ozersky P., Armstrong J.R., Fulton R.S., Latreille J.P., Spieth J., Hooton T.M., Mardis E.R., Hultgren S.J., Gordon J.I.; Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach.Proc. Natl. Acad. Sci. U.S.A. 103:5977-5982(2006).
Protein ref. UniProtKB:   Q1RDJ8  Q8CW71 [Other strain]
DNA ref. GenBank:   CP000243 (1069985..1071256)
Protein sequence: EcoDyPrx01_UTI89 (ycdB)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   423 (333)
PWM (Da):   %s   46535.79 (36910.4)  
PI (pH):   %s   6.44 (5.46) Peptide Signal:   %s   cut: 20 range:20-352
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MQYEDENGVN EPSRRRLLKG IGALALAGSC PVAHAQKTQS APGTLSPDAR NEKQPFYGEH QAGILTPQQA AMMLVAFDVL ASDKADLERL FRLLTQRFAF LTQGGAAPET PNPRLPPLDS  GILGGYIAPD NLTITLSVGH SLFDERFGLA PQMPKKLQKM TRFPNDSLDA ALCHGDVLLQ ICANTQDTVI HALRDIIKHT PDLLSVRWKR EGFISDHAAR SKGKETPINL LGFKDGTANP  DSQNDKLMQK VVWVTADQQE PAWTIGGSYQ AVRLIQFRVE FWDRTPLKEQ QTIFGRDKQT GAPLGMLHEH DVPDYASDPE GKVIALDSHI RLANPRTAES ESSLMLRRGY SYSLGVTNSG 
QLDMGLLFVC YQHDLEKGFL TVQKRLNGEA LEEYVKPIGG GYFFALPGVK DANDYLGSAL LRV 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="UTI89" and "O6:H1 / CFT073 / ATCC 700928 / UPEC".