Entry information : PnoVCPo
Entry ID 5896
Creation 2007-10-22 (Christophe Dunand)
Last sequence changes 2007-10-22 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-09-04 (Catherine Mathe (Scipio))
Peroxidase information: PnoVCPo
Name PnoVCPo
Class No haem, Vanadium chloroperoxidase    [Orthogroup: VCPo001]
Taxonomy Eukaryota Fungi Ascomycota Dothideomycetes Phaeosphaeriaceae Phaeosphaeria
Organism Phaeosphaeria nodorum (Stagonospora nodorum)    [TaxId: 13684 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PnoVCPo
start..stop
S start..stop
CinaVCPo 833 0 8..587 5..596
PtritVCPo 741 0 7..571 4..581
EdVCPo 696 0 7..564 5..574
MgrVCPo 542 0 12..570 7..565
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 50851..52629 1779  
join(50851..52629)


exon

Literature and cross-references PnoVCPo
Literature Birren,B., et al., The Broad Institute Genome Sequencing Platform. Annotation of the Phaeosphaeria nodorum SN15 genome.
Protein ref. GenPept:   EAT82270 UniProtKB:   Q0UE79
DNA ref. JGI genome:   scaffold_16 (50851..52629)
mRNA ref. GenBank:   CH445340
Protein sequence: PnoVCPo
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   592
PWM (Da):   %s   64491.02  
PI (pH):   %s   4.98
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTTQPPFVPL PLPPVEESKE YGKNYILHWN LCALDLNRVS HSVAGPQTGP PLSARSLGML HLAIHDAYFA IQSSTAFSTF LAANAEDAEL RLPDLNGATD ARQAVAGAAF TLLGLLYLQG  GPTISNNATA QLQAVLDRFL ASAPGGVDQA SGSYQFGAAV GEAIFQLLFH PPGVSADGYH PTPGRYKFDD EPTHPVVLVP VDPNDPNGPK KAIRQYHGPF YGKTAKRVAT QSEHMIADPP  GLRSNVDEGA EYDDALRDII RMGGAIPLNS TKRSPDDTAR GHFWAYDGSN LVGTPPRFYN QIIRNIAVQH KQDADIESEV NNADFARVFA LANAAMADAG VFSWREKWEF EFWRPLSGVR  DDGRPDHGDP FFLSLGAPST NTNDIPFKPP FPAYPSGHAT FGGAMFQMLR RYYNGRVGTW APNEPDNICF EMVSDELNGI NRDLRQPYDP TTPITEQPGI VRTRMPYKFS SLWEAIFDNA 
ISRVFLGVHW RFDAAAAKDI LIPTDTKDVY ATDNTGATVY QNPEDIRYET MSTREGHEGL LPIGGVPLGM GIANDIWESG LKPTPKSIQP APPAEQSKEG EQVVMGLPNA AP 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). Strain="SN15".
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACCACAC AGCCTCCCTT CGTGCCTCTG CCGCTTCCCC CGGTGGAAGA GTCCAAAGAG TATGGCAAGA ACTACATCCT GCACTGGAAT CTCTGCGCCC TTGATCTCAA CAGAGTATCG  CATTCAGTCG CGGGTCCTCA GACTGGACCA CCCTTGTCAG CAAGATCTTT GGGCATGTTA CACCTAGCGA TCCATGATGC GTATTTTGCC ATTCAGTCAT CCACAGCATT CTCTACCTTC  TTGGCAGCCA ATGCAGAAGA TGCTGAGTTG CGACTCCCTG ACCTTAATGG CGCGACAGAT GCTCGTCAGG CCGTTGCAGG TGCTGCCTTC ACTTTGCTAG GGCTCTTGTA CCTACAGGGT  GGACCCACAA TCTCCAACAA TGCGACAGCG CAGCTCCAAG CCGTGCTTGA CCGCTTTCTC GCATCTGCAC CAGGCGGTGT GGACCAGGCT TCTGGCAGCT ACCAGTTTGG AGCGGCGGTA  GGCGAGGCCA TCTTCCAGCT CCTTTTCCAT CCTCCTGGTG TCTCGGCAGA CGGGTACCAC CCAACACCTG GACGTTACAA GTTCGACGAC GAGCCAACCC ATCCTGTTGT ACTCGTTCCA  GTGGACCCCA ATGACCCCAA TGGTCCAAAG AAAGCAATCA GACAATACCA TGGACCTTTT TATGGCAAGA CTGCGAAGCG CGTTGCCACT CAGTCCGAAC ATATGATTGC CGACCCGCCT  GGTCTTCGCT CCAACGTCGA TGAAGGAGCC GAGTATGACG ATGCACTGAG AGACATCATA CGCATGGGTG GAGCTATTCC TCTCAACTCG ACCAAGCGCA GCCCGGACGA TACTGCACGT  GGCCACTTTT GGGCGTACGA TGGGTCGAAT TTGGTTGGCA CTCCTCCTCG CTTCTATAAC CAGATCATCC GCAACATTGC CGTGCAACAC AAGCAAGACG CCGACATCGA GAGTGAAGTC  AACAATGCGG ATTTCGCGCG TGTCTTTGCC CTTGCAAATG CCGCAATGGC TGATGCTGGC GTCTTTTCGT GGCGCGAGAA GTGGGAGTTC GAGTTCTGGC GTCCACTCAG TGGCGTTCGC  GATGATGGTC GTCCAGACCA CGGCGACCCT TTCTTCCTTT CACTCGGTGC TCCTTCCACA AACACCAACG ACATTCCGTT CAAGCCACCA TTTCCTGCTT ATCCAAGCGG TCACGCTACC  TTCGGTGGCG CGATGTTCCA GATGCTGCGT CGTTACTACA ATGGTCGCGT TGGAACCTGG GCTCCAAATG AACCGGACAA CATCTGCTTC GAGATGGTGT CTGACGAGTT GAATGGCATC  AATCGCGACT TGCGCCAGCC ATACGACCCG ACTACGCCCA TCACGGAGCA ACCAGGCATT GTGCGCACAC GCATGCCCTA CAAGTTCTCC AGTCTTTGGG AAGCCATCTT CGACAACGCC  ATCTCGCGCG TCTTCCTGGG CGTGCATTGG CGTTTTGATG CCGCCGCTGC GAAAGATATC CTCATTCCCA CGGATACGAA GGACGTGTAC GCTACTGACA ACACCGGGGC GACTGTGTAT  CAGAATCCGG AGGATATTCG ATACGAGACG ATGAGCACGA GGGAGGGTCA CGAGGGGCTT TTGCCAATTG GTGGTGTTCC TCTTGGTATG GGCATCGCAA ATGACATCTG GGAGTCGGGG 
CTGAAGCCGA CGCCTAAAAG CATTCAGCCC GCGCCTCCAG CTGAGCAGTC GAAGGAGGGC GAGCAGGTGG TCATGGGACT ACCGAACGCT GCGCCCTAG 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACCACAC AGCCTCCCTT CGTGCCTCTG CCGCTTCCCC CGGTGGAAGA GTCCAAAGAG TATGGCAAGA ACTACATCCT GCACTGGAAT CTCTGCGCCC TTGATCTCAA CAGAGTATCG  CATTCAGTCG CGGGTCCTCA GACTGGACCA CCCTTGTCAG CAAGATCTTT GGGCATGTTA CACCTAGCGA TCCATGATGC GTATTTTGCC ATTCAGTCAT CCACAGCATT CTCTACCTTC  TTGGCAGCCA ATGCAGAAGA TGCTGAGTTG CGACTCCCTG ACCTTAATGG CGCGACAGAT GCTCGTCAGG CCGTTGCAGG TGCTGCCTTC ACTTTGCTAG GGCTCTTGTA CCTACAGGGT  GGACCCACAA TCTCCAACAA TGCGACAGCG CAGCTCCAAG CCGTGCTTGA CCGCTTTCTC GCATCTGCAC CAGGCGGTGT GGACCAGGCT TCTGGCAGCT ACCAGTTTGG AGCGGCGGTA  GGCGAGGCCA TCTTCCAGCT CCTTTTCCAT CCTCCTGGTG TCTCGGCAGA CGGGTACCAC CCAACACCTG GACGTTACAA GTTCGACGAC GAGCCAACCC ATCCTGTTGT ACTCGTTCCA  GTGGACCCCA ATGACCCCAA TGGTCCAAAG AAAGCAATCA GACAATACCA TGGACCTTTT TATGGCAAGA CTGCGAAGCG CGTTGCCACT CAGTCCGAAC ATATGATTGC CGACCCGCCT  GGTCTTCGCT CCAACGTCGA TGAAGGAGCC GAGTATGACG ATGCACTGAG AGACATCATA CGCATGGGTG GAGCTATTCC TCTCAACTCG ACCAAGCGCA GCCCGGACGA TACTGCACGT  GGCCACTTTT GGGCGTACGA TGGGTCGAAT TTGGTTGGCA CTCCTCCTCG CTTCTATAAC CAGATCATCC GCAACATTGC CGTGCAACAC AAGCAAGACG CCGACATCGA GAGTGAAGTC  AACAATGCGG ATTTCGCGCG TGTCTTTGCC CTTGCAAATG CCGCAATGGC TGATGCTGGC GTCTTTTCGT GGCGCGAGAA GTGGGAGTTC GAGTTCTGGC GTCCACTCAG TGGCGTTCGC  GATGATGGTC GTCCAGACCA CGGCGACCCT TTCTTCCTTT CACTCGGTGC TCCTTCCACA AACACCAACG ACATTCCGTT CAAGCCACCA TTTCCTGCTT ATCCAAGCGG TCACGCTACC  TTCGGTGGCG CGATGTTCCA GATGCTGCGT CGTTACTACA ATGGTCGCGT TGGAACCTGG GCTCCAAATG AACCGGACAA CATCTGCTTC GAGATGGTGT CTGACGAGTT GAATGGCATC  AATCGCGACT TGCGCCAGCC ATACGACCCG ACTACGCCCA TCACGGAGCA ACCAGGCATT GTGCGCACAC GCATGCCCTA CAAGTTCTCC AGTCTTTGGG AAGCCATCTT CGACAACGCC  ATCTCGCGCG TCTTCCTGGG CGTGCATTGG CGTTTTGATG CCGCCGCTGC GAAAGATATC CTCATTCCCA CGGATACGAA GGACGTGTAC GCTACTGACA ACACCGGGGC GACTGTGTAT  CAGAATCCGG AGGATATTCG ATACGAGACG ATGAGCACGA GGGAGGGTCA CGAGGGGCTT TTGCCAATTG GTGGTGTTCC TCTTGGTATG GGCATCGCAA ATGACATCTG GGAGTCGGGG 
CTGAAGCCGA CGCCTAAAAG CATTCAGCCC GCGCCTCCAG CTGAGCAGTC GAAGGAGGGC GAGCAGGTGG TCATGGGACT ACCGAACGCT GCGCCCTAG 

Retrieve as FASTA