Entry information : MtPrx01 (Rip1 / Medtr5g074860.1[4.0] / Medtr5g074860.1[3.5] / Medtr5g082780.1[3.0])
Entry ID | 59 |
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Creation | 2006-09-06 (Christophe Dunand) |
Last sequence changes | 2010-09-14 (Haythem Mhadhbi) |
Sequence status | complete |
Reviewer | Bruno Savelli |
Last annotation changes | 2017-08-08 (Bruno Savelli) |
Peroxidase information: MtPrx01 (Rip1 / Medtr5g074860.1[4.0] / Medtr5g074860.1[3.5] / Medtr5g082780.1[3.0])
Name (synonym) | MtPrx01 (Rip1 / Medtr5g074860.1[4.0] / Medtr5g074860.1[3.5] / Medtr5g082780.1[3.0]) | ||||||||||||||||||||||||||||||||||||
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Class | Class III peroxidase [Orthogroup: Prx010] | ||||||||||||||||||||||||||||||||||||
Taxonomy | Eukaryota Viridiplantae Streptophyta Fabaceae Medicago | ||||||||||||||||||||||||||||||||||||
Organism | Medicago truncatula (barrel medic) [TaxId: 3880 ] | ||||||||||||||||||||||||||||||||||||
Cellular localisation | N/D |
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Tissue types | Immature seeds Pods Roots |
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Inducers | Pathogen interaction Phytophthora infection Rhizobium inoculation |
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Repressor | N/D |
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Best BLASTp hits |
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Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '59' 'complement(join(31797488..31798048,31798223..31798417,31799302..31799523))' |
Exons►
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Literature and cross-references MtPrx01 (Rip1 / Medtr5g074860.1[4.0] / Medtr5g074860.1[3.5] / Medtr5g082780.1[3.0])
Literature | Transient induction of a peroxidase gene in Medicago truncatula precedes infection by Rhizobium meliloti. Plant Cell 7 (1), 43-55 (1995) |
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Protein ref. | UniProtKB: Q40372 |
DNA ref. | Phytozome 12: chr5 (31799523..31797488) |
Cluster/Prediction ref. | Phytozome Gene 12: 31090495 UniGene: Mtr.12647 |
Omic ref. | Gene atlas: Mtr.25211.1.S1_at Legoo: Mtr.25211.1.S1_at |
Other ref. | Medicago_jcvi: 23235 |
Protein sequence: MtPrx01 (Rip1 / Medtr5g074860.1[4.0] / Medtr5g074860.1[3.5] / Medtr5g082780.1[3.0])
Sequence Properties first value : protein second value (mature protein) |
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Sequence Send to BLAST Send to Peroxiscan |
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Remarks | Complete sequence from genomic (chromo 5, introns 1 and 2), 26 ESTs. Transcript variant predicted by Phytozome (extra intron and lack of VALS). | ||||||||||||
Promoter► Send to BLAST Send to cis Analysis |
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Terminator +► Send to BLAST Send to cis Analysis |
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DNA ► Send to BLAST |
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CDS► Send to BLAST |
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cDNA► Send to BLAST |
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