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Entry information : SsclLDS02
Entry ID 5937
Creation 2007-10-26 (Christophe Dunand)
Last sequence changes 2007-10-26 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-27 (Catherine Mathe (Scipio))
Peroxidase information: SsclLDS02
Name SsclLDS02
Class Linoleate diol synthase (PGHS like)    [Orthogroup: LDS001]
Taxonomy Eukaryota Fungi Ascomycota Leotiomycetes Sclerotiniaceae Sclerotinia
Organism Sclerotinia sclerotiorum    [TaxId: 5180 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SsclLDS02
start..stop		 S start..stop
AorLDS01 795 0 121..1143 48..1057
NfLDS01 787 0 121..1117 48..1037
AclLDS01 786 0 106..1117 32..1037
AflLDS01 785 0 121..1088 48..1009
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1509606..1510460 853 N° 2 1509317..1509540 222 N° 3 1508983..1509257 273 N° 4 1508391..1508922 530
N° 5 1507939..1508206 266 N° 6 1507070..1507852 781 N° 7 1506844..1506914 69 N° 8 1506280..1506669 388
N° 9 1505841..1505933 91 N° 10 1505628..1505679 50  
complement(join(1505628..1505679,1505841..1505933,1506280..1506669,1506844..1506 914,1507070..1507852,1507939..1508206,1508391..1508922,1508983..1509257,1509317. .1509540,1509606..1510460))


exon

Literature and cross-references SsclLDS02
Literature The Broad Institute Genome Sequencing Platform. Annotation of the Sclerotinia sclerotiorum 1980 genome.
Protein ref. UniProtKB:   A7E8M9
DNA ref. JGI genome:   Supercontig_2.2 (1510460..1505628)
Protein sequence: SsclLDS02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1180
PWM (Da):   %s   131453.8  
PI (pH):   %s   6.98
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MDASNRKNGEVDDKAFVRNFGKRSVTGKNNLVTRYRDYFTGKFQGKFRKSDRLDQNSLPKENTKSKSEPVSTSQLQYQPQITTEIMSAESSSTQPVWTSDTSKTKPTIISDIESATHSIQ
AIFRDLKSITPEDANTLLQLFSSEIKGVQNDNTLLLEKTVQLLSSQPETSGIGKSLTASFVNTLWDALPHPPMRSLDKKYMYRDADGGNNNIRMPDLGRAGTAYAKNVNAVRMKKKDLPD
PGELFDSLMRRGGIDGEEPFKGSPTGISSQLFYLATIIIHDLFLTDHEDMTKSKTSSYLDLSPLYGCNQEEQNAIRTFEDGKLKPDCFSSKRILGFPPGVGVFLIMFNRFHNYVVEMLAQ
INDNGRFTKPKPEAEKSAFDKYDNDLFQTGRLVTCGLYVNIVLKDYVRTILNLNRTTSKWDLDPRVEEAKNLLSNPAAEGVGNQVSAEFNIYRWHSAISQKDEEWTNAEYTRLFPNKSPA
DVTLPELLRGLYTMEAELPTDPSQRSFANLTRLPDGSYDEGSLASIFQSSVEDLSGAFGAANVPPIMRSIEILSIIQSRSWNMCTLNEFRSFVGLTPHKSFADINPDPIIAKRLKEFYGS
PEDLELYPRVVVRKTKPPVVPGSGLCTGYNEVQFDTNIDDGAVLYKLVLRAFPNYFEGNSIYAHFPFTTPEVNREIQKSLGREGLYSWEVPKKKAELSSVQTWDECKGILEDSVNWVTWG
PPISVLTSQESSDSSKTDSSPAVLPFCLAGDAPVNATSRSLIISSFYNLPTGHDHKNDKEHPDWSSALNQFYTDNTADLFEKHKVLIPTVSTSASTNETSTISKTYRVDIVSDICNRVFT
RFAAGVFDIPLKLGMGNTVDVNITTDPEEGYTEEELYDSLSVAFICIFNNLDVTKSFAVDQQARAIAKKLGDILMERTKDGKIGEAFDGLKDKLHSLVFDDKTERHVEGWVQKEKERLAL
KGYGREMVERFIEGGKKSSNFSSNDGKSISASFSSYRLLPYFLEATRIHGNVALLRLYSPSQTTSQTPTSTSPSKSTTYTPGTVYLLNLPLAQHDPTAFPDPETVKLDRNLNSYLTFGQG
RHECLGKNAALMGMLRVFRIIIGLKGLRLDVGKNGMVSGGMKSVGQGLELGTSTLLFPNISLTLTLTLTPSYLLSKSAKKRLDEKKKKKKKGFEESMK

Retrieve as FASTA  
Remarks Complete sequence from genomic (9 introns). Strain="1980". Regions: 296-608 peroxidase domain; 1044-1096 "cypX" cytochrome P450 domain.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATGCTTCAAATAGGAAGAATGGGGAAGTGGATGATAAAGCTTTTGTAAGAAATTTTGGGAAGCGATCGGTAACGGGAAAAAATAACCTGGTAACAAGATACCGAGATTATTTTACT
GGAAAATTCCAAGGGAAATTTAGGAAAAGTGATCGCTTGGATCAGAACTCTTTACCAAAGGAGAATACCAAGTCGAAATCAGAGCCAGTTTCAACATCTCAATTACAATATCAACCACAA
ATCACAACCGAAATCATGTCTGCTGAATCATCCTCAACCCAGCCTGTCTGGACATCTGATACTTCCAAAACAAAACCAACAATCATTTCTGACATCGAATCTGCAACTCATAGCATCCAA
GCCATCTTCCGAGATCTCAAATCCATCACTCCAGAGGATGCAAATACTTTACTCCAACTCTTCTCTTCGGAGATCAAGGGTGTCCAAAATGACAATACGCTTCTTCTAGAAAAGACAGTA
CAATTGCTATCTTCTCAACCAGAAACTTCAGGAATTGGAAAAAGTCTAACAGCAAGTTTTGTGAATACTCTTTGGGATGCTCTACCGCATCCACCTATGAGGAGTTTGGATAAGAAATAT
ATGTATAGGGATGCAGATGGTGGGAATAATAATATTCGGATGCCCGATTTAGGGAGAGCGGGGACGGCTTATGCAAAGAATGTTAATGCTGTGAGAATGAAGAAGAAGGATTTACCTGAT
CCGGGAGAGCTTTTTGATAGTTTGATGAGGAGAGGTGGAATAGATGGAGAAGAGCCGTTTAAAGGGAGTCCGACGGGTATCAGTAGTCAGTTGTTTTATTTGGCTACGATTATTATTCAT
GATCTCTTTCTTACGGTAGGTGCAATTCGTCGATGCTTAGTATTGTCAGAGGAATTCAAGAAGCTAATGACTAGAGATAGGAGATCATGAAGATATGACTAAGTCCAAGACGAGTAGTTA
TTTGGATCTCTCACCTCTCTATGGCTGCAATCAAGAAGAGCAAAATGCAATTCGAACATTTGAAGATGGTAAACTCAAACCAGATTGTTTCTCCTCAAAAAGAATCTTAGGATTTCCCCC
TGGTGTGGGAGTTTTCTTAATTATGTTCAATCGATTCCATAATTATGTTGTGGAAATGCTTGCTCAGTCAGTATTCCCATTTTTATTCTTCTATGTTTGGATATCAAAGCTAACTAGGAT
TTCAGAAAATTAACGACAATGGCCGTTTCACCAAGCCCAAGCCAGAGGCGGAAAAATCTGCTTTTGATAAGTACGACAACGATCTCTTCCAGACAGGTAGACTTGTTACTTGTGGCTTGT
ATGTCAATATCGTTTTGAAGGATTATGTCCGTACGATTTTAAATCTCAATCGTACAACTTCGAAATGGGATTTAGATCCGAGAGTTGAGGAGGCAAAGAATCTTTTGAGTAATCCTGCTG
CCGAGGGGGTGGGAAATCAAGTCTCTGCTGAATTTAATTTGAGTATGTTCCATTCACTTTATGCGTTAAATCTTACCATGCAAATACTTATTTGATAAATAGTTTTTACCGTTGGCACTC
AGCTATCTCTCAAAAAGATGAAGAATGGACCAACGCAGAATACACCAGACTCTTCCCTAATAAAAGTCCAGCTGATGTCACGCTTCCCGAACTTCTCAGAGGTCTTTATACGATGGAGGC
GGAACTTCCTACCGATCCTTCTCAACGCTCTTTTGCAAACCTTACCCGTCTTCCCGATGGATCATATGATGAGGGATCTCTCGCATCAATTTTCCAATCATCAGTAGAAGACCTTTCTGG
TGCCTTTGGTGCCGCAAATGTTCCACCTATCATGCGTTCTATCGAAATTCTCTCCATCATACAAAGTCGTTCTTGGAATATGTGCACGCTCAATGAATTCCGTTCTTTCGTGGGATTGAC
ACCTCATAAGTCATTTGCCGATATAAATCCAGATCCTATCATTGCAAAACGATTGAAGGAATTTTATGGCAGTCCTGAGGATCTGGAATTGTATCCGCGGGTGGTCGTCAGGAAAACTAA
ACCCCCCGTGGTACCCGGTAGTGGTTTGTGTACAGGGTAATAGTATTAGTTATAGTATCCTTGAGTGATGCCGTTGGGTTGGTTAGAGGGGATAGGTTTTATACTACGGATTATTCGCCG
GGGTACTCTTACTAACTGGGGGGTTCGTTTATTTACTTTTTCCTCTGTCTTTCTTCTCGACCCTCTCAATCTTAAAAAAGTTACTAACATGGCCAAATAGATATATAATGAAGTACAATT
CGATACCAATATCGATGATGGTGCTGTGCTTTACAAATTAGTCCTTCGAGCTTTCCCGAACTACTTTGAGGGAAATTCTATATATGCTCATTTTCCATTCACAACACCTGAAGTTAACCG
TGAGATTCAAAAGAGCTTGGGAAGAGAGGGGTTGTATAGTTGGGAAGTTCCAAAAAAGAAGGCAGAGCTGTCGAGCGTGCAGACTTGGGATGAATGTAAGGGGATTTTGGAGGATTCGGT
TAATTGGAAGGTTGGTTTTTCTTTATTCCCAACTATGTGTAGAGGTCACTTTTTGGAGGAAGGCAGTCGGAGAGATACTAACTATGATTAATTTAGGTGTAACATGGGGTCCACCAATCT
CTGTTTTGACTTCGCAAGAATCTAGCGACTCTTCAAAAACCGACAGTTCACCCGCTGTTCTACCCTTCTGTCTCGCAGGTGATGCTCCTGTAAATGCTACCTCTCGCTCTCTTATAATAT
CTTCTTTCTATAATCTTCCAACTGGTCATGATCATAAAAATGATAAAGAACATCCGGATTGGTCATCTGCACTCAATCAGTTCTACACGGATAATACGGCCGATTTGTTCGAAAAACATA
AAGTTCTCATTCCGACTGTTAGCACCTCCGCTTCTACCAATGAAACTAGCACAATCAGCAAAACCTACAGAGTTGACATCGTATCCGACATCTGCAATCGCGTCTTTACTCGTTTTGCAG
CTGGTGTTTTCGATATCCCACTGAAACTCGGAATGGGAAATACAGTCGACGTGAACATAACTACAGACCCCGAAGAAGGATACACAGAAGAAGAATTATATGACTCACTTTCCGTTGCAT
TCATCTGTATCTTCAACAATCTCGACGTTACGAAATCTTTCGCAGTAGATCAACAAGCTCGAGCTATAGCTAAGAAACTTGGAGATATTTTGATGGAGAGGACGAAGGATGGGAAGATTG
GTGAAGCTTTTGATGGGTTGAAGGATAAGTTGCATAGTTTGGTTTTTGATGATAAGACTGAGAGACATGTTGAAGGGTGGGTTCAGAAGGAGAAGGAAAGATTGGCGTTGAAGGGGTATG
GGAGGGAAATGGTTGAGAGGTTTATAGAGGGGGGGAAGAAGGTGGGTTGGGGTGTTCAGGAGGTGGTTTGGGAACAAATGTTTGTCCTTTCTTTCTTTTTGTTCCGCCATCCATTTTTTC
ATTTGTTTTTCTTTTCTGAATATTTATTTGACTTTTGTGCTTTGGATTCTCGCTAACAAACCCCTCTTGAAATCAGTCTCTTCCAACTTCAGCAGCAATGACGGCAAATCAATCTCAGCT
TCTTTCTCAAGTTATAGATTATTACCTTAGTGATGCGGGATCATCACATTTACCACAACTTTATACTCTTGCGCATGGAAATAGCAAGGAGGCTGATAATTTATTGTTACGCTAGTATGT
TTTCGCGTTCTCTTTTCATTCCCGCAAAATAACACAAACCCAAAATAGAAATAAAAATAAAATCTCAAACTAACATCTTAAAGTTTTTCCTCGAAGCAACCCGAATCCACGGAAACGTCG
CCTTACTCCGTCTTTACTCCCCATCTCAAACCACTTCTCAAACCCCCACATCCACATCCCCATCCAAATCCACCACCTACACCCCAGGAACCGTCTACCTCCTCAACCTCCCCCTCGCTC
AACACGACCCTACCGCCTTCCCGGACCCAGAAACCGTCAAGCTCGATAGAAATCTAAATTCCTACCTCACATTCGGACAGGGAAGACATGAATGTTTGGGAAAAAATGCTGCATTGATGG
GTATGTTGAGGGTGTTTAGGATTATTATTGGTTTGAAGGGTTTGAGACTTGATGTGGGGAAGAATGGAATGGTGAGTGGAGGGATGAAGAGTGTAGGACAAGGATTGGAATTGGGGTATT
TGAGTGAGGAGTGGGGGAATATAGGTCCGTTTCCGATGAGTTTGAGGGTGCTTTGGGATGAGTGAGGAGGGTAGGGTGGGGTGGGGAGGATATGTTTGAGTGGTGTTTTTTGATGGGTGT
TTTTGTTTTTCTTGCTTTTTTTGTCTGGGTAGTAAGGAGGTAGGATGGGGGTTTTGTTATGATGTTTGTTTCCTTTTTTATTGATACATCAATATACCAACAACTCTCTACTATCTATAT
TGAATACTAAATATTACCTACAACAGGTATACTTCTTTAACTCAACTTATTCCCCTTCAAAAATTCAAATTAAGATATTAATCTAGTCGATTCCACTCTAGTATACCAGTACTCTACTCT
TTCCTAACATCTCACTCACTCTCACTCTCACTCTTACTCCTAGTTATTTACTTTCAAAAAGTGCGAAAAAAAGACTGTATTTTTAAAAATGAATGTATGTATCTAAGTTCTAGGTAACTA
GAAACAAAAAATATATAAATATATAAATCTTAAAAATATGATTATGTTTTTATAATTATAGGTTTTTATTTTTAGGAATTTGGGATATTAGGATGTTTGAAATGTTTAATTTGATAGGGG
GATGAGAAGAAGAAGAAGAAGAAGAAAGGTTTTGAAGAAAGTATGAAGTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATGCTTCAAATAGGAAGAATGGGGAAGTGGATGATAAAGCTTTTGTAAGAAATTTTGGGAAGCGATCGGTAACGGGAAAAAATAACCTGGTAACAAGATACCGAGATTATTTTACT
GGAAAATTCCAAGGGAAATTTAGGAAAAGTGATCGCTTGGATCAGAACTCTTTACCAAAGGAGAATACCAAGTCGAAATCAGAGCCAGTTTCAACATCTCAATTACAATATCAACCACAA
ATCACAACCGAAATCATGTCTGCTGAATCATCCTCAACCCAGCCTGTCTGGACATCTGATACTTCCAAAACAAAACCAACAATCATTTCTGACATCGAATCTGCAACTCATAGCATCCAA
GCCATCTTCCGAGATCTCAAATCCATCACTCCAGAGGATGCAAATACTTTACTCCAACTCTTCTCTTCGGAGATCAAGGGTGTCCAAAATGACAATACGCTTCTTCTAGAAAAGACAGTA
CAATTGCTATCTTCTCAACCAGAAACTTCAGGAATTGGAAAAAGTCTAACAGCAAGTTTTGTGAATACTCTTTGGGATGCTCTACCGCATCCACCTATGAGGAGTTTGGATAAGAAATAT
ATGTATAGGGATGCAGATGGTGGGAATAATAATATTCGGATGCCCGATTTAGGGAGAGCGGGGACGGCTTATGCAAAGAATGTTAATGCTGTGAGAATGAAGAAGAAGGATTTACCTGAT
CCGGGAGAGCTTTTTGATAGTTTGATGAGGAGAGGTGGAATAGATGGAGAAGAGCCGTTTAAAGGGAGTCCGACGGGTATCAGTAGTCAGTTGTTTTATTTGGCTACGATTATTATTCAT
GATCTCTTTCTTACGGATCATGAAGATATGACTAAGTCCAAGACGAGTAGTTATTTGGATCTCTCACCTCTCTATGGCTGCAATCAAGAAGAGCAAAATGCAATTCGAACATTTGAAGAT
GGTAAACTCAAACCAGATTGTTTCTCCTCAAAAAGAATCTTAGGATTTCCCCCTGGTGTGGGAGTTTTCTTAATTATGTTCAATCGATTCCATAATTATGTTGTGGAAATGCTTGCTCAA
ATTAACGACAATGGCCGTTTCACCAAGCCCAAGCCAGAGGCGGAAAAATCTGCTTTTGATAAGTACGACAACGATCTCTTCCAGACAGGTAGACTTGTTACTTGTGGCTTGTATGTCAAT
ATCGTTTTGAAGGATTATGTCCGTACGATTTTAAATCTCAATCGTACAACTTCGAAATGGGATTTAGATCCGAGAGTTGAGGAGGCAAAGAATCTTTTGAGTAATCCTGCTGCCGAGGGG
GTGGGAAATCAAGTCTCTGCTGAATTTAATTTGATTTACCGTTGGCACTCAGCTATCTCTCAAAAAGATGAAGAATGGACCAACGCAGAATACACCAGACTCTTCCCTAATAAAAGTCCA
GCTGATGTCACGCTTCCCGAACTTCTCAGAGGTCTTTATACGATGGAGGCGGAACTTCCTACCGATCCTTCTCAACGCTCTTTTGCAAACCTTACCCGTCTTCCCGATGGATCATATGAT
GAGGGATCTCTCGCATCAATTTTCCAATCATCAGTAGAAGACCTTTCTGGTGCCTTTGGTGCCGCAAATGTTCCACCTATCATGCGTTCTATCGAAATTCTCTCCATCATACAAAGTCGT
TCTTGGAATATGTGCACGCTCAATGAATTCCGTTCTTTCGTGGGATTGACACCTCATAAGTCATTTGCCGATATAAATCCAGATCCTATCATTGCAAAACGATTGAAGGAATTTTATGGC
AGTCCTGAGGATCTGGAATTGTATCCGCGGGTGGTCGTCAGGAAAACTAAACCCCCCGTGGTACCCGGTAGTGGTTTGTGTACAGGATATAATGAAGTACAATTCGATACCAATATCGAT
GATGGTGCTGTGCTTTACAAATTAGTCCTTCGAGCTTTCCCGAACTACTTTGAGGGAAATTCTATATATGCTCATTTTCCATTCACAACACCTGAAGTTAACCGTGAGATTCAAAAGAGC
TTGGGAAGAGAGGGGTTGTATAGTTGGGAAGTTCCAAAAAAGAAGGCAGAGCTGTCGAGCGTGCAGACTTGGGATGAATGTAAGGGGATTTTGGAGGATTCGGTTAATTGGAAGGTAACA
TGGGGTCCACCAATCTCTGTTTTGACTTCGCAAGAATCTAGCGACTCTTCAAAAACCGACAGTTCACCCGCTGTTCTACCCTTCTGTCTCGCAGGTGATGCTCCTGTAAATGCTACCTCT
CGCTCTCTTATAATATCTTCTTTCTATAATCTTCCAACTGGTCATGATCATAAAAATGATAAAGAACATCCGGATTGGTCATCTGCACTCAATCAGTTCTACACGGATAATACGGCCGAT
TTGTTCGAAAAACATAAAGTTCTCATTCCGACTGTTAGCACCTCCGCTTCTACCAATGAAACTAGCACAATCAGCAAAACCTACAGAGTTGACATCGTATCCGACATCTGCAATCGCGTC
TTTACTCGTTTTGCAGCTGGTGTTTTCGATATCCCACTGAAACTCGGAATGGGAAATACAGTCGACGTGAACATAACTACAGACCCCGAAGAAGGATACACAGAAGAAGAATTATATGAC
TCACTTTCCGTTGCATTCATCTGTATCTTCAACAATCTCGACGTTACGAAATCTTTCGCAGTAGATCAACAAGCTCGAGCTATAGCTAAGAAACTTGGAGATATTTTGATGGAGAGGACG
AAGGATGGGAAGATTGGTGAAGCTTTTGATGGGTTGAAGGATAAGTTGCATAGTTTGGTTTTTGATGATAAGACTGAGAGACATGTTGAAGGGTGGGTTCAGAAGGAGAAGGAAAGATTG
GCGTTGAAGGGGTATGGGAGGGAAATGGTTGAGAGGTTTATAGAGGGGGGGAAGAAGTCTTCCAACTTCAGCAGCAATGACGGCAAATCAATCTCAGCTTCTTTCTCAAGTTATAGATTA
TTACCTTATTTCCTCGAAGCAACCCGAATCCACGGAAACGTCGCCTTACTCCGTCTTTACTCCCCATCTCAAACCACTTCTCAAACCCCCACATCCACATCCCCATCCAAATCCACCACC
TACACCCCAGGAACCGTCTACCTCCTCAACCTCCCCCTCGCTCAACACGACCCTACCGCCTTCCCGGACCCAGAAACCGTCAAGCTCGATAGAAATCTAAATTCCTACCTCACATTCGGA
CAGGGAAGACATGAATGTTTGGGAAAAAATGCTGCATTGATGGGTATGTTGAGGGTGTTTAGGATTATTATTGGTTTGAAGGGTTTGAGACTTGATGTGGGGAAGAATGGAATGGTGAGT
GGAGGGATGAAGAGTGTAGGACAAGGATTGGAATTGGGTACCAGTACTCTACTCTTTCCTAACATCTCACTCACTCTCACTCTCACTCTTACTCCTAGTTATTTACTTTCAAAAAGTGCG
AAAAAAAGACTGGATGAGAAGAAGAAGAAGAAGAAGAAAGGTTTTGAAGAAAGTATGAAGTAA

Retrieve as FASTA