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Entry information : PtroPGHS02
Entry ID 5940
Creation 2007-10-26 (Christophe Dunand)
Last sequence changes 2010-11-23 (Myriam Duval (Scipio))
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-12-21 (Christophe Dunand)
Peroxidase information: PtroPGHS02
Name PtroPGHS02
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Hominidae Pan
Organism Pan troglodytes (chimpanzee)    [TaxId: 9598 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtroPGHS02
start..stop		 S start..stop
HsPGHS02 1264 0 137..740 1..604
CfaPGHS02 1165 0 137..740 1..604
OcuPGHS02 1141 0 151..740 15..604
SscPGHS02 1137 0 148..740 12..604
Gene structure Fichier Exons►


exon

Literature and cross-references PtroPGHS02
Literature Chimpanzee Sequencing and Analysis Consortium Initial sequence of the chimpanzee genome and comparison with the human genome. Nature 437 (7055), 69-87 (2005).
DNA ref. GenBank:   NC_006468.2 (166431276..166424665)
mRNA ref. GenBank:   XM_524999.2
EST ref. GenBank:   DC525522.1 [5' end]
Protein sequence: PtroPGHS02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   740 (325)
PWM (Da):   %s   83509.34 (36042.1)  
PI (pH):   %s   8.86 (7.74) Peptide Signal:   %s   cut: 28 range:28-352
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSAFLNLTRPSLSRRDFLDPLKTYRPDTAAAAGEGIPCAPGPQGG
SDSGRGSQVSFCPPPVSHPRRSVQNWLSEALGQRLRGRKDIWRKPRPVVRRLAVSVRSTSRNSSAAPPSAPQPDALRQQSLPPRRALPAAAMLARALLLCAVLALSHTANPCCSHPCQNRGVCMSVGFDQYKCDCTRTGFYGENCSTPEFLTRIKLFLKPTPNTV
HYILTHFKGFWNVVNNIPFLRNAIMSYVLTSRSHLIDSPPTYNADYGYKSWEAFSNLSYYTRALPPVPDDCPTPLGVKGKKQLPDSNEIVEKLLLRRKFIPDPQGSNMMFAFFAQHFTHQ
FFKTDHKRGPAFTNGLGHVDLNHIYGETLARQHKLRLFKDGKMKYQIIDGEMYPPTVKDTQAEMIYPPQVPEHLRFAVGQEFFGLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLF
QTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNKQFQYQNRIAAEFNTLYHWHPLLPDTFQIHDQKYNYQQFIYNNSILLEHGITQFVESFTRQIAGVAGGRNVPPAVQKVSQA
SIDQSRQMKYQSFNEYRKRFMLKPYESFEELTGEKEMSAELEALYGDIDAVELYPALLVEKPRPDAIFGETMVEVGAPFSLKGLMGNVICSPAYWKPSTFGGEVGFQIINTASIQSLICN
NVKGCPFTSFSVPDPELIKTVTINASSSRSGLDDINPTVLLKERSTEL

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, 10 introns) and 1 EST. Isolate="Yerkes chimp pedigree #C0471 (Clint)".
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