Entry information : PtroNOx05-B
Entry ID 6042
Creation 2007-12-05 (Christophe Dunand)
Last sequence changes 2010-11-23 (Myriam Duval)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-11 (Christophe Dunand)
Peroxidase information: PtroNOx05-B
Name PtroNOx05-B
Class NADPH oxidase V    [Orthogroup: NOxV001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Hominidae Pan
Organism Pan troglodytes (chimpanzee)    [TaxId: 9598 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtroNOx05-B
start..stop
S start..stop
HsNOx05 1509 0 1..737 1..765
PtroNOx05-A 1491 0 19..737 1..719
MmulNOx05 1304 0 1..737 1..736
EcabNOx05 1292 0 1..737 1..766
Gene structure Fichier Exons


exon

Literature and cross-references PtroNOx05-B
Literature Chimpanzee Sequencing and Analysis Consortium. Initial sequence of the chimpanzee genome and comparison with the human genome. Nature 437 (7055), 69-87 (2005).
DNA ref. GenBank:   NC_006482.2 (66765372..66807591)
mRNA ref. GenBank:   XM_001174856
EST ref. GenBank:   DC527183.1 [5' end]
Protein sequence: PtroNOx05-B
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   737
PWM (Da):   %s   83572.07 Transmb domain:   %s   i211-229o239-261i290-312o332-354i367-389o394-413i555-577o
PI (pH):   %s   8.95
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNTSGDPAQTGPEGCRGTMSAEEDARWLRWVTQQFKTIAGEDGEISLQEFKAALHVKSFFAERFFALFDSDRSGTITLQELQEALTLLVHGSPMDKLKFLFQVYDIDGSGSIDPDELRTV
LQSCLRESAISLPDEKLDQLTLALFESADADGNGAITFEELRDELQRFPGVMENLTI
SAAHWLTAPAPRPRPRRPRQLTRAYWHNHRSQLFCLATYAGLHVLLFALAASAHRDLGASVMV
AKGCGQCLNFDCSFI
VLMLRRCLTWLRATWLAQVLPLDQNIQFHQLMGYVVVGLSLVHTVAHTVNFVLQAQAEASPFQFWELLLTTRPGIGWVHGSASPTGVALLLLLLLMFICSSSCIR
RSGHF
VFYWTHLSYLLVWLLLIFHGPNFWKWLLVPGILFFLEKAIGLAVSRMAAVCIMEVNLLPSKVTHLLIKRPPFFHYRPGDYLYLNIPTIARYEWHPFTISSAPEQKDTIWLHIRSQ
GQWTNRLYESFKASDPLGRGSKRLSRSVTMRKSQRSS
GSEILLEKHKFCNIKCYIDGPYGTPTRRIFASEHAVLIGAGIGITPFASILQSIMYRHQKRKHTCPSCQHSWIEGVQDNMKLHVDFIWINRDQRSFEWFVSLLTKLEMDQAKEAQYGRFLELHMYMTSALGKNDMKAIGLQMALDLLANKEKKDSITGLQTRTQPGRPDWSVFQKVAAEKKGKVQVFFCGSPALAKVLKGHCE
KFGFRFFQENF*

Retrieve as FASTA  
Remarks Complete sequence from genomic (Chromo 15, 16 introns) and 1 EST. Isolate="Yerkes chimp pedigree #C0471 (Clint)". Transcript variant 2 (predicted and confirmed by EST).
DNA
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CDS
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