Entry information : PtRboh05 (POPTR_0006s09850 / Potri.006G097200)
Entry ID 6077
Creation 2008-01-28 (Christophe Dunand)
Last sequence changes 2008-01-28 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-03-08 (Qiang Li)
Peroxidase information: PtRboh05 (POPTR_0006s09850 / Potri.006G097200)
Name (synonym) PtRboh05 (POPTR_0006s09850 / Potri.006G097200)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh003]
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus trichocarpa (Western balsam poplar)    [TaxId: 3694 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtRboh05
start..stop
S start..stop
PtRboh08 1494 0 1..846 1..852
EgrRboh06 1192 0 6..846 3..857
EglRboh06 1189 0 6..846 3..857
EguRboh06 1188 0 6..846 3..857
Gene structure Fichier Exons


exon

Literature and cross-references PtRboh05 (POPTR_0006s09850 / Potri.006G097200)
DNA ref. Phytozome 12:   Chr06 (7424185..7428075)
Omic ref. ePlant:   Potri.006G097200
Protein sequence: PtRboh05 (POPTR_0006s09850 / Potri.006G097200)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   846
PWM (Da):   %s   96545.01 Transmb domain:   %s   i299-316o384-406i431-453o481-503i672-689o
PI (pH):   %s   9.7
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGSRTESKKWMLENIEIDRMVEVPINDEPKKAFPPRGPVGASIKWSASNLGASLRRTTSSALRKNGVLSSKPPRPKMERTASSAARGLKSLRFLDRTVTGKEMDAWRSIERRFDQFAVDE
RLPKDKFGICI
GLGDSKEFAGEIFDAIARRKNIFTANGITKDELKLFWEDMTKQDLDSRLGIFFDMCDKNGDGRLSEEEVKIIVLSASANKLTNLKQYAAVYAALIMEELDPDHLGYIGL
WQLETLLREMVNNEDQITTKLNRSTHTLTRAMIPRRYRTPVTKSLSLSVEYIHENWRRIWVMTLWLAVNLALFIWKFKEFEKSPLFKISSYCVCLAKASAETLKLNMALILLPVCRRTLT
KLRSSFLGTFIPFDDNINFHKNIALAIVIATVAHTLAHMLCNIPLLSSCPKDKFMAYAGPLFNYQQPTYWFFIRSSVGVTGILIILVMGFSFTLATHYFRKNVVKLPGAFHKLAGFNAFW
YAHQLLALAYLLCFLHGYFLIFEKPWYAKT
TWMYLIGPVVFYATERISTKYQEHHHQVDVIKAIIYTGNVLALYMNKPPGFKYESGMYLFIKSPDLSSFEWHPFSITSAPGDNNLSVHIR
TVGDWTTELKNLFA
VCEAPPAAKQKQGRLNRLETIAMSNSNYDQIQATFPKILIKGPFGAPAQNYKKFDILLLIGLGIGATPFISILKDLLNGIKPSAADSMDRRCTERAYFYWVTREQS
SFDWFKGVMDDVADYDDN
HIIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGLDVVSQSRIRTHFARPNWRKVFAQMAETHKSSRIGVFYCGSALLVKTLRELCQEFTLDSSTRFQFHK
ENF

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo LGVI (CM000342), 13 introns).
DNA
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CDS
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