View Redoxidase 6121

Entry information : SaRboh03(SaNOX3)

Entry ID	6121
Creation	2008-02-21 (Daniel Marino)
Last sequence changes	2008-02-21 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2019-12-11 (Christophe Dunand)

Peroxidase information: SaRboh03(SaNOX3)

Name

SaRboh03(SaNOX3)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga

Organism

Striga asiatica (witchweed) [TaxId: 4170 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SaRboh03 start..stop	S start..stop
NtRboh04_BelW3	1427	0	1..901	1..938
NbRboh02	1422	0	1..901	1..939
LeRboh02	1414	0	1..901	1..938
NtRboh04_bottom	1408	0	1..901	1..939

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6121' 'complement(join(1839448..1839557,1839899..1840449,1841236..1841309,1841979..1842081,1842254..1842369,1842561..1842656,1842749..1843558,1843638..1843751,1844007..1844122,1844228..1844843))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1844228..1844843	614	N° 2	1844007..1844122	114	N° 3	1843638..1843751	112	N° 4	1842749..1843558	808
N° 5	1842561..1842656	94	N° 6	1842254..1842369	114	N° 7	1841979..1842081	101	N° 8	1841236..1841309	72
N° 9	1839899..1840449	549	N° 10	1839448..1839557	108
complement(join(1839448..1839557,1839899..1840449,1841236..1841309,1841979..1842 081,1842254..1842369,1842561..1842656,1842749..1843558,1843638..1843751,1844007. .1844122,1844228..1844843))

Literature and cross-references SaRboh03(SaNOX3)

Literature	Liang L., Palmer A.G. and Lynn D.G.Cloning and functional analyses of three gp91phox homologs in Striga asiatica. Direct submission
Protein ref.	GenBank: GER48533.1 ABG35768.1 [Other strain]

Protein sequence: SaRboh03(SaNOX3)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	901
PWM (Da):	100546.88	Transmb domain:	o338-360i474-496o522-544i704-721o
PI (pH):	9.93

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MQNPESSQQH RPNSSDSDAP APGEKPAAAA SNSDPLSKRP ARKSARFSVP EASSANPGGS GSGAGASAPG GEDYVEITLD VRDDSVAVHS VKAAGGGEVE DPELALLAKG LEKRTSLGSI LVRNASSRIR QVSQELKRLA STTRRPHPAG VFDRNKSAAA HALKGLKFIS KTDGGAAWAG VEQRFDELTA NLDGLLPRSL FGQCIGMNKE SKEFAGELFD ALARRRNIVR GSITKAQLKE FWDQIITLSA SANKLSNIQK QADEYARLIM EELDPNELGY IMIENLEMLL LQGPSQSVRG GAESRNLSKM LSEKLKPTQD TFIRRKYRDF HYFVLDNWQR LWVMALWIAI MAGLFTYKYI QYRNRAVFKV MGHCVCMAKG AAETLKLNMA LILLPVCRNT ITWLRNRTKL GVAVPFDDNL NFHKVIAIAI SLGVGIHAIS HLTCDFPRLL AATPKEYEPM EQFFGKQATS YWHFVLSWEG ITGVVIVVLM AIAFTLATPW FRRNRVDLPR PFNKLTGFNA FWYSHHLFVI VYALLIIHGI KLYLTHEWYK KTTWMYLTVP IMLYAGERLI RAFRSSIKAV KILKVAVYPG NVLALHMSKP QGFKYKSGQY IFVNCAAVSP FEWHPFSITS APRDDYVSVH IRTLGDWTRQ LKAVFAEVCQ PPPTGKSGLL RADFMQGENN PNFPRVLIDG PYGAPTQDYK DYDVVLLVGL GIGATPMISV VKDIVNNIKA MDEEEGGATR GSTPNASPLS TPRRKSGSDR RDFKTRRAYF YWVTREQGSF DWFKGVMNEV SEMDHKGVIE MHNYCTSVYE EGDARSALIT MLQSLNHAKN GVDVVSGTRV
KSHFAKPNWR TVYKRIALNH PTARVGVFYC GAPPPVKELR QLASDFSHRT TTKFEFHKEN F

Retrieve as FASTA

Remarks

Complete sequence from genomic

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGCAGAACC CGGAAAGCAG TCAACAGCAC CGCCCCAACA GCTCCGACTC CGACGCCCCT GCCCCCGGAG AGAAGCCGGC AGCGGCGGCG TCGAACAGCG ACCCGCTTAG CAAGCGCCCG GCCCGGAAGA GCGCACGGTT CAGCGTCCCC GAGGCATCCT CTGCCAACCC CGGCGGATCT GGCTCCGGCG CCGGCGCCTC CGCCCCCGGC GGGGAGGACT ACGTGGAGAT TACCCTTGAC GTGCGGGATG ACTCGGTAGC AGTGCACAGC GTGAAAGCCG CGGGCGGCGG TGAGGTGGAG GATCCGGAGC TGGCTTTGCT GGCCAAGGGC CTCGAGAAGA GGACGTCCCT CGGCTCCATC CTCGTGCGAA ACGCCTCGTC AAGGATCCGC CAGGTGTCGC AGGAGCTCAA GCGGCTGGCC TCCACCACGC GCCGACCCCA CCCAGCGGGT GTATTTGACC GGAACAAGTC CGCGGCTGCC CACGCGCTCA AGGGACTCAA GTTCATCAGC AAGACTGACG GGGGAGCCGC CTGGGCTGGA GTGGAACAGA GGTTCGATGA ACTTACGGCT AACTTGGACG GCTTGCTCCC ACGCTCCCTT TTCGGGCAAT GCATTGGTAT GAATAAGGAG TCGAAGGAGT TTGCCGGCGA GCTTTTCGAT GCCCTGGCTA GGCGGAGGAA CATCGTCAGA GGTTCGATTA CCAAAGCACA GCTCAAGGAG TTTTGGGATC AGATTATTAC CCTAAGTGCC TCTGCAAACA AGCTGTCAAA CATCCAAAAA CAAGCCGATG AATACGCGAG ACTGATCATG GAGGAATTAG ACCCCAACGA ACTCGGATAC ATAATGATCG AGAACTTGGA GATGTTACTC CTGCAAGGAC CAAGCCAATC CGTGAGAGGC GGTGCCGAAA GCCGTAACCT AAGCAAGATG CTAAGCGAGA AGCTTAAGCC AACACAAGAC ACCTTCATAA GAAGAAAGTA CAGAGACTTT CACTACTTTG TGCTCGACAA CTGGCAAAGA CTATGGGTGA TGGCGCTGTG GATCGCGATA ATGGCAGGCC TCTTCACTTA CAAGTACATA CAATACAGAA ATAGAGCCGT TTTCAAAGTC ATGGGCCATT GTGTGTGCAT GGCCAAAGGG GCCGCCGAGA CTCTAAAACT CAACATGGCC TTGATTTTGC TGCCCGTGTG CCGCAACACC ATAACCTGGC TCAGGAACAG GACAAAACTC GGAGTCGCTG TCCCGTTTGA CGACAACCTT AATTTTCACA AAGTAATTGC CATAGCAATT TCGTTAGGTG TAGGGATACA CGCGATTTCC CATTTAACGT GCGATTTTCC GCGGCTACTA GCAGCCACGC CGAAAGAATA CGAGCCTATG GAGCAATTTT TTGGCAAGCA AGCAACGAGC TATTGGCATT TCGTGTTGAG CTGGGAAGGG ATAACTGGGG TTGTAATCGT GGTTCTAATG GCCATAGCTT TTACACTTGC AACACCGTGG TTTAGGAGGA ATAGGGTCGA CTTGCCGAGA CCTTTCAACA AGCTCACGGG GTTCAATGCG TTTTGGTATT CGCACCACTT GTTTGTTATT GTCTATGCAC TCCTCATTAT TCATGGCATC AAACTTTACT TGACACATGA ATGGTACAAG AAAACGACAT GGATGTATCT GACTGTTCCA ATCATGCTCT ATGCTGGGGA AAGATTGATC AGGGCATTCA GGTCTAGCAT CAAGGCTGTT AAGATCTTAA AGGTGGCTGT CTACCCAGGA AATGTATTGG CTCTGCACAT GTCAAAGCCA CAAGGATTCA AATACAAAAG TGGGCAATAC ATTTTTGTCA ACTGTGCAGC AGTTTCTCCA TTTGAATGGC ACCCATTTTC CATCACTTCA GCACCCAGGG ATGATTATGT GAGCGTTCAC ATAAGGACTC TTGGTGATTG GACCAGGCAA CTCAAAGCTG TCTTCGCAGA GGTTTGTCAG CCACCACCTA CGGGAAAGAG TGGGCTCCTT AGGGCTGACT TTATGCAAGG AGAGAACAAT CCCAACTTTC CGCGTGTCTT GATCGACGGT CCATACGGTG CACCCACGCA GGATTACAAA GACTACGACG TGGTCCTGCT GGTCGGGCTC GGAATCGGAG CCACACCTAT GATAAGCGTC GTGAAAGACA TCGTGAACAA CATAAAGGCC ATGGACGAGG AGGAGGGTGG GGCCACGCGG GGCTCCACAC CCAACGCAAG CCCTCTATCG ACCCCTAGGA GGAAGTCGGG TTCTGATAGG CGCGACTTCA AGACTCGGAG GGCTTACTTC TATTGGGTCA CGAGGGAACA GGGCTCGTTC GACTGGTTCA AGGGCGTAAT GAACGAGGTG TCTGAAATGG ACCACAAAGG AGTGATCGAG ATGCACAATT ACTGCACGAG TGTGTATGAG GAGGGAGATG CTCGATCGGC TTTGATCACA ATGCTTCAAT CACTTAACCA TGCCAAGAAT GGGGTTGATG TCGTATCGGG AACTAGGGTT AAGTCGCATT TTGCGAAACC TAACTGGCGA ACTGTCTATA AGCGTATAGC ACTTAATCAT CCTACGGCAC GAGTCGGAGT GTTTTATTGT GGGGCGCCAC CACCAGTGAA GGAACTAAGG
CAACTAGCAT CTGATTTTTC TCACAGAACC ACCACAAAGT TCGAATTCCA CAAAGAAAAC TTTTGA

Retrieve as FASTA