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Entry information : AvePrx111-1A_H938
Entry ID 6126
Creation 2008-04-01 (ester Simonetti)
Last sequence changes 2012-05-09 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-05-09 (Christophe Dunand)
Peroxidase information: AvePrx111-1A_H938
Name AvePrx111-1A_H938
Class Class III peroxidase    [Orthogroup: Prx077]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Aegilops
Organism Aegilops ventricosa (Goatgrass) (Triticum ventricosum)    [TaxId: 116981 ]
Cellular localisation Secreted
Tissue type Roots
Inducer Cyst nematode infection
Repressor N/D
Best BLASTp hits
Perox score E-value AvePrx111-1A_H938
start..stop		 S start..stop
TaPrx01-2B 646 0 1..316 1..316
TaPrx01-1B 646 0 1..316 1..316
AvePrx111-1E_H938 630 0 1..316 1..316
TaPrx01-1A 629 0 1..316 1..316
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6126' 'join(225..428,521..712,819..984,1109..1497)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 225..428 202 N° 2 521..712 190 N° 3 819..984 164 N° 4 1109..1497 387
join(225..428,521..712,819..984,1109..1497)


exon

Literature and cross-references AvePrx111-1A_H938
Literature Simonetti,E., Veronico,P., Melillo,M.T., Delibes,A., Andres,M.F. and Lopez-Brana,I. Analysis of Class III Peroxidase Genes Expressed in Roots of Resistant and Susceptible Wheat Lines Infected by Heterodera avenae. Mol. Plant Microbe Interact. 22 (9), 1081-1092 (2009)
DNA ref. GenBank:   EU542600.1
Protein sequence: AvePrx111-1A_H938
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   316 (295)
PWM (Da):   %s   32954.1 (31050.2)  
PI (pH):   %s   6.1 (6.10) Peptide Signal:   %s   cut: 22 range:22-316
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASASCLGLVVLVAMASAASAQLSSTFYDTSCPNALATIKAGVTA
AVQNEARMGASLVRLHFHDCFVDGCDGSVLLADTGSFIGEQGAAPNNNSIRGMNVIDNIKTQVEAVCKQTVSCADILAVAARDSVVALGGPTWTVLLGRRDSTTASKTNAENDLPPPTFDLQNLTTLFGNKQLSMTDMVALSG
AHTIGQSQCRFFRDRIYNETNIDTAFATSLRANCPRSGGDNSLAPLDTGTPNGFDNAYYTNLMSQKGLLHSDQVLFNGGGADNTVRSFSSSAATFNSAFTTAMINMGNIAPKTGTQGQIR
LVCSKVNS

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns). Triticum aestivum/Aegilops ventricosa introgression line, genotype: "H-93-8"
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTCTGCCTCTTGCCTTGGCTTAGTGGTGCTCGTGGCAATGGCCTCGGCGGCGTCGGCGCAGCTGTCGTCGACGTTCTACGACACGTCTTGCCCCAACGCGCTGGCCACCATCAAG
GCCGGCGTGACGGCCGCCGTGCAAAACGAGGCCCGCATGGGGGCGTCGCTGGTGCGGCTGCACTTCCACGACTGCTTCGTCGATATGCAAGTCCCATAACCTTACTCAGTTGCGAGTATT
AGACAGTCACGCTGTAAAAAAAACTGTCAAATGATAGTGTTTCTGAATTTGTTTCCAGGGATGTGACGGGTCCGTTCTATTGGCGGACACGGGGAGCTTCATCGGCGAGCAGGGGGCAGC
CCCGAACAACAATTCCATTCGAGGCATGAACGTCATCGACAACATCAAGACCCAGGTGGAGGCCGTGTGCAAGCAGACCGTCTCCTGCGCCGACATCCTCGCCGTCGCTGCCCGTGACTC
CGTCGTCGCGCGGTAAGCTTGGCAATTACAGCTCTCATGCATGTCTTGCACATGCTATTGCTAGTACTACTACTTTCTTAAACTGTGGTTTGGAACTAATTCTGGGCATACCAAGCAGCT
GGGTGGGCCGACATGGACAGTTCTTCTCGGGAGGAGGGACTCCACCACTGCAAGCAAGACCAACGCGGAAAATGACCTGCCACCTCCTACCTTCGACCTCCAAAACCTCACCACCTTGTT
CGGCAACAAGCAGCTCAGCATGACAGACATGGTCGCGCTCTCAGAGGTACACACTGCTAATATGCTTTTTCTCATCTCAAACTTTACGACAAAGACTAGCAAGAGCTATTCTGACAGGAT
CTACGAGAAATATGCCGTGACCTTGTTCTGTGATCTCGATCTATCTGCAGGCGCCCACACGATCGGGCAATCGCAGTGCCGGTTCTTCAGGGACAGGATCTACAACGAGACCAACATCGA
CACTGCCTTCGCGACATCTCTCAGAGCCAACTGCCCCCGGTCCGGCGGCGATAACAGCCTGGCGCCGCTGGACACTGGCACGCCCAACGGGTTCGACAACGCCTACTACACCAACCTCAT
GTCCCAAAAGGGGCTGCTGCACTCGGACCAGGTGCTGTTCAACGGAGGCGGCGCCGACAACACGGTCAGGAGCTTCTCGTCCAGCGCCGCGACGTTCAACAGCGCCTTCACGACGGCCAT
GATAAACATGGGGAACATCGCGCCCAAGACAGGGACGCAGGGGCAGATCAGGCTCGTCTGCTCCAAGGTCAACTCGTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCTCTGCCTCTTGCCTTGGCTTAGTGGTGCTCGTGGCAATGGCCTCGGCGGCGTCGGCGCAGCTGTCGTCGACGTTCTACGACACGTCTTGCCCCAACGCGCTGGCCACCATCAAG
GCCGGCGTGACGGCCGCCGTGCAAAACGAGGCCCGCATGGGGGCGTCGCTGGTGCGGCTGCACTTCCACGACTGCTTCGTCGATGGATGTGACGGGTCCGTTCTATTGGCGGACACGGGG
AGCTTCATCGGCGAGCAGGGGGCAGCCCCGAACAACAATTCCATTCGAGGCATGAACGTCATCGACAACATCAAGACCCAGGTGGAGGCCGTGTGCAAGCAGACCGTCTCCTGCGCCGAC
ATCCTCGCCGTCGCTGCCCGTGACTCCGTCGTCGCGCTGGGTGGGCCGACATGGACAGTTCTTCTCGGGAGGAGGGACTCCACCACTGCAAGCAAGACCAACGCGGAAAATGACCTGCCA
CCTCCTACCTTCGACCTCCAAAACCTCACCACCTTGTTCGGCAACAAGCAGCTCAGCATGACAGACATGGTCGCGCTCTCAGGCGCCCACACGATCGGGCAATCGCAGTGCCGGTTCTTC
AGGGACAGGATCTACAACGAGACCAACATCGACACTGCCTTCGCGACATCTCTCAGAGCCAACTGCCCCCGGTCCGGCGGCGATAACAGCCTGGCGCCGCTGGACACTGGCACGCCCAAC
GGGTTCGACAACGCCTACTACACCAACCTCATGTCCCAAAAGGGGCTGCTGCACTCGGACCAGGTGCTGTTCAACGGAGGCGGCGCCGACAACACGGTCAGGAGCTTCTCGTCCAGCGCC
GCGACGTTCAACAGCGCCTTCACGACGGCCATGATAAACATGGGGAACATCGCGCCCAAGACAGGGACGCAGGGGCAGATCAGGCTCGTCTGCTCCAAGGTCAACTCGTAA

Retrieve as FASTA