View Redoxidase 6214

Entry information : SmKat01-2_44 (SmKat01b_44)

Entry ID	6214
Creation	2008-07-07 (Christophe Dunand)
Last sequence changes	2011-02-01 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2011-02-01 (Christophe Dunand)

Peroxidase information: SmKat01-2_44 (SmKat01b_44)

Name (synonym)

SmKat01-2_44 (SmKat01b_44)

Class

Catalase [Orthogroup: Kat001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella

Organism

Selaginella moellendorffii [TaxId: 88036 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SmKat01-2_44 start..stop	S start..stop
SmKat01-1_2	1008	0	1..492	1..492
AcvKat02	922	0	1..492	1..492
SmKat02-2_1	910	0	1..492	1..492
SmKat02-1_5	910	0	1..492	1..492

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6214' 'join(702801..702815,702996..703092,703172..703449,703514..704290,704336..704425,704478..704545,704609..704702,704760..704819)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	702801..702815	13	N° 2	702996..703092	95	N° 3	703172..703449	276	N° 4	703514..704290	775
N° 5	704336..704425	88	N° 6	704478..704545	66	N° 7	704609..704702	92	N° 8	704760..704819	58
join(702801..702815,702996..703092,703172..703449,703514..704290,704336..704425, 704478..704545,704609..704702,704760..704819)

Literature and cross-references SmKat01-2_44 (SmKat01b_44)

Literature	JGI
DNA ref.	Phytozome 12: scaffold_44 (702801..704819)
mRNA ref.	JGI transcript: 178171
EST ref.	GenBank: DN837595.1 [5' end] FE476532 [3' end]
Cluster/Prediction ref.	UniGene: Smo.309

Protein sequence: SmKat01-2_44 (SmKat01b_44)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	492
PWM (Da):	56495.27
PI (pH):	7.79

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MDPYKYRPSSAYNSAHFTTNTGAPVWNNNASLTVGSRGPILLEDYHLVEKLAQFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPR
GFAVKFYTRGNFDMVGNNFPVFFVRDGMKFPDMVHALKPNPRTHIQENWRIMDFFSHHPESLHMFTFLLDDIGIPLNYRHMEGFGVHTFTLVNRAGKCSYVKFHWKPTCGVKSLLEEQAV
IVGGSNHSHATQDLQDSIAAGNYPEWKLFIQTMEIKNENNYDFDPLDVTKTWPEDLFPLQPVGRLVLNKNIDNFFAENEQLAFCPALVVPGVYYTDDKLLQTRIFSYADTQRHRLGPNYL
LLPANAPKCAHHNNHHEGFMNFTHRDEEVNYFPSRFDPCRHAERVPIPSHPLGGRREKVMIEKENNFAQPGARFRSWPAERQERFIARVVDALSDPRVTHEIRSIWLSYWSADRMLGQKI
ATKLNVKANM*

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGATCCCTATAAGAGGTTTGATTCTCACCTTTTGCGCCGTAGCAGCTAGCGTAGAGTAGCTTATTGATTCTTTGCGCATTGCGGTGCCGGATCAATCTAGAGCAGTTTCTTCGCAATC
GTGGTCTAGGCCTCCATTTCTTGATCTTCTTGCTCGATTTGTTCACGATTTGACAAAATTTCCTTGGATTTCTCCAGTATCGCCCTTCCAGCGCCTATAATTCGGCCCATTTCACCACGA
ACACTGGCGCTCCTGTGTGGAACAACAATGCGTCGCTCACCGTGGGCTCTCGAGAGGTACACAATTTCTTTCTATCCATAGCCCAAAATACTTACTTCATTGTATCTTTGTTTTTTTTTT
TTTTTTTCTTGCCAGGTCCTATCCTTCTCGAGGATTATCATCTGGTCGAGAAGCTGGCCCAGTTTGATCGTGAAAGAATTCCCGAGCGTGTCGTGCATGCACGAGGAGCGAGTGCCAAGG
GATTTTTCGAGGTGACCCACGACGTATCCCACCTCACTTGTGCCGATTTCCTGAGAGCTCCCGGAGTGCAAACTCCCGTTATCGTGCGGTTTTCTACTGTCATTCACGAGCGTGGCAGCC
CAGAAACTCTTCGAGATCCTCGAGGCTTTGCGGTCAAGTTCTACACTCGAGAGAGGTTTGTAGTTTTTTTGTTTGGCTTTCTTTCGTTTTTCTCAAAGAATGTGGTGTTGTGGATGCAGG
GAAACTTTGATATGGTTGGAAACAATTTTCCCGTGTTCTTCGTCCGAGATGGAATGAAGTTCCCTGACATGGTCCATGCGCTGAAGCCCAACCCAAGGACTCATATCCAGGAGAATTGGA
GGATCATGGACTTCTTCTCGCACCATCCCGAGAGTCTTCACATGTTCACGTTCCTGCTCGACGATATTGGCATCCCGCTCAACTATCGTCATATGGAGGGCTTTGGCGTCCACACTTTCA
CTCTCGTGAACCGGGCTGGCAAGTGCTCCTACGTGAAGTTCCACTGGAAGCCAACTTGTGGTGTCAAGAGCTTGCTGGAAGAACAGGCAGTCATCGTTGGTGGATCGAACCACAGCCATG
CAACGCAGGATCTGCAAGACTCTATTGCAGCAGGGAACTATCCCGAGTGGAAGCTGTTTATCCAGACCATGGAAATCAAGAACGAGAACAACTACGACTTCGATCCTTTGGATGTTACCA
AGACGTGGCCCGAGGATCTCTTCCCGCTGCAGCCCGTGGGTCGGCTAGTTTTAAACAAGAACATCGACAACTTCTTTGCGGAGAACGAGCAGCTGGCTTTCTGCCCCGCTTTGGTGGTGC
CTGGAGTTTATTACACGGACGACAAGCTGCTTCAGACCCGAATTTTCTCGTACGCTGACACTCAGAGGCACAGGCTGGGGCCGAATTACTTGCTGCTTCCTGCGAACGCTCCCAAGTGTG
CTCATCACAACAACCATCACGAGGGATTCATGAACTTCACCCACAGGGACGAAGAGAGGTATGACAAGCTTTTGCTTATACGTTCTATATCCTGTGTTTGCAGGTGAACTATTTCCCTTC
GCGCTTTGATCCTTGCCGTCACGCTGAGCGAGTGCCTATTCCTTCTCACCCTCTCGGTGGTCGACGAGAAAAGAGGTTTGGCTATCTTCTCATTTTATGCTTTGGCAATAATGTTTTTCT
CTTGTAGGTGATGATTGAAAAGGAAAATAACTTTGCTCAGCCAGGAGCAAGGTTCCGCTCCTGGCCTGCTGAGAGAGGCAAGATCTCAAACCTCTCTCTCAGCTAGTCATGTTTTAACTG
AATCTCTGCTCCTCTTCCAGGCAAGAGCGTTTCATTGCGAGAGTTGTGGATGCTCTGTCCGACCCGCGCGTCACCCACGAAATCCGTAGCATCTGGCTCTCTTACTGGTCTCAGAGGTTA
GACAAGAAAGAAAAGACAGCATGTGATCAAACTCAACCATGAAACGTGTGCAGGCGGATCGTATGCTTGGTCAGAAGATTGCAACGAAACTCAACGTGAAAGCCAACATGTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGATCCCTATAAGTATCGCCCTTCCAGCGCCTATAATTCGGCCCATTTCACCACGAACACTGGCGCTCCTGTGTGGAACAACAATGCGTCGCTCACCGTGGGCTCTCGAGGTCCTATC
CTTCTCGAGGATTATCATCTGGTCGAGAAGCTGGCCCAGTTTGATCGTGAAAGAATTCCCGAGCGTGTCGTGCATGCACGAGGAGCGAGTGCCAAGGGATTTTTCGAGGTGACCCACGAC
GTATCCCACCTCACTTGTGCCGATTTCCTGAGAGCTCCCGGAGTGCAAACTCCCGTTATCGTGCGGTTTTCTACTGTCATTCACGAGCGTGGCAGCCCAGAAACTCTTCGAGATCCTCGA
GGCTTTGCGGTCAAGTTCTACACTCGAGAGGGAAACTTTGATATGGTTGGAAACAATTTTCCCGTGTTCTTCGTCCGAGATGGAATGAAGTTCCCTGACATGGTCCATGCGCTGAAGCCC
AACCCAAGGACTCATATCCAGGAGAATTGGAGGATCATGGACTTCTTCTCGCACCATCCCGAGAGTCTTCACATGTTCACGTTCCTGCTCGACGATATTGGCATCCCGCTCAACTATCGT
CATATGGAGGGCTTTGGCGTCCACACTTTCACTCTCGTGAACCGGGCTGGCAAGTGCTCCTACGTGAAGTTCCACTGGAAGCCAACTTGTGGTGTCAAGAGCTTGCTGGAAGAACAGGCA
GTCATCGTTGGTGGATCGAACCACAGCCATGCAACGCAGGATCTGCAAGACTCTATTGCAGCAGGGAACTATCCCGAGTGGAAGCTGTTTATCCAGACCATGGAAATCAAGAACGAGAAC
AACTACGACTTCGATCCTTTGGATGTTACCAAGACGTGGCCCGAGGATCTCTTCCCGCTGCAGCCCGTGGGTCGGCTAGTTTTAAACAAGAACATCGACAACTTCTTTGCGGAGAACGAG
CAGCTGGCTTTCTGCCCCGCTTTGGTGGTGCCTGGAGTTTATTACACGGACGACAAGCTGCTTCAGACCCGAATTTTCTCGTACGCTGACACTCAGAGGCACAGGCTGGGGCCGAATTAC
TTGCTGCTTCCTGCGAACGCTCCCAAGTGTGCTCATCACAACAACCATCACGAGGGATTCATGAACTTCACCCACAGGGACGAAGAGGTGAACTATTTCCCTTCGCGCTTTGATCCTTGC
CGTCACGCTGAGCGAGTGCCTATTCCTTCTCACCCTCTCGGTGGTCGACGAGAAAAGGTGATGATTGAAAAGGAAAATAACTTTGCTCAGCCAGGAGCAAGGTTCCGCTCCTGGCCTGCT
GAGAGGCAAGAGCGTTTCATTGCGAGAGTTGTGGATGCTCTGTCCGACCCGCGCGTCACCCACGAAATCCGTAGCATCTGGCTCTCTTACTGGTCTCAGGCGGATCGTATGCTTGGTCAG
AAGATTGCAACGAAACTCAACGTGAAAGCCAACATGTAG

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGATCCCT ATAAGTATCG CCCTTCCAGC GCCTATAATT CGGCCCATTT CACCACGAAC ACTGGCGCTC CTGTGTGGAA CAACAATGCG TCGCTCACCG TGGGCTCTCG AGGTCCTATC CTTCTCGAGG ATTATCATCT GGTCGAGAAG CTGGCCCAGT TTGATCGTGA AAGAATTCCC GAGCGTGTCG TGCATGCACG AGGAGCGAGT GCCAAGGGAT TTTTCGAGGT GACCCACGAC GTATCCCACC TCACTTGTGC CGATTTCCTG AGAGCTCCCG GAGTGCAAAC TCCCGTTATC GTGCGGTTTT CTACTGTCAT TCACGAGCGT GGCAGCCCAG AAACTCTTCG AGATCCTCGA GGCTTTGCGG TCAAGTTCTA CACTCGAGAG GGAAACTTTG ATATGGTTGG AAACAATTTT CCCGTGTTCT TCGTCCGAGA TGGAATGAAG TTCCCTGACA TGGTCCATGC GCTGAAGCCC AACCCAAGGA CTCATATCCA GGAGAATTGG AGGATCATGG ACTTCTTCTC GCACCATCCC GAGAGTCTTC ACATGTTCAC GTTCCTGCTC GACGATATTG GCATCCCGCT CAACTATCGT CATATGGAGG GCTTTGGCGT CCACACTTTC ACTCTCGTGA ACCGGGCTGG CAAGTGCTCC TACGTGAAGT TCCACTGGAA GCCAACTTGT GGTGTCAAGA GCTTGCTGGA AGAACAGGCA GTCATCGTTG GTGGATCGAA CCACAGCCAT GCAACGCAGG ATCTGCAAGA CTCTATTGCA GCAGGGAACT ATCCCGAGTG GAAGCTGTTT ATCCAGACCA TGGAAATCAA GAACGAGAAC AACTACGACT TCGATCCTTT GGATGTTACC AAGACGTGGC CCGAGGATCT CTTCCCGCTG CAGCCCGTGG GTCGGCTAGT TTTAAACAAG AACATCGACA ACTTCTTTGC GGAGAACGAG CAGCTGGCTT TCTGCCCCGC TTTGGTGGTG CCTGGAGTTT ATTACACGGA CGACAAGCTG CTTCAGACCC GAATTTTCTC GTACGCTGAC ACTCAGAGGC ACAGGCTGGG GCCGAATTAC TTGCTGCTTC CTGCGAACGC TCCCAAGTGT GCTCATCACA ACAACCATCA CGAGGGATTC ATGAACTTCA CCCACAGGGA CGAAGAGGTG AACTATTTCC CTTCGCGCTT TGATCCTTGC CGTCACGCTG AGCGAGTGCC TATTCCTTCT CACCCTCTCG GTGGTCGACG AGAAAAGGTG ATGATTGAAA AGGAAAATAA CTTTGCTCAG CCAGGAGCAA GGTTCCGCTC CTGGCCTGCT GAGAGGCAAG AGCGTTTCAT TGCGAGAGTT GTGGATGCTC TGTCCGACCC GCGCGTCACC CACGAAATCC GTAGCATCTG GCTCTCTTAC TGGTCTCAGG CGGATCGTAT GCTTGGTCAG
AAGATTGCAA CGAAACTCAA CGTGAAAGCC AACATGTAG

Retrieve as FASTA