Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
220 |
PWM (Da): |
23609.23 |
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PI (pH):
| 9.93 |
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Sequence 261
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MASSSAAPLCGGAVLAAAAPRKSPALSSCAAILRPPCLASSSIAAESSLFRRVCGLGVAKSPSRRLLSTSCKLSQGDVLPSFNLKDQEGRVVNSSKFKNKPVVLYFYPADESPGCTKEACAFRDSYDKFRKAGAEVIGISADTPESHKAFAKKYRLPFTLLTDEGNKLRKDWGIPGDFFGSLPGRQTYVIDKKGVVRLVFNNQFQPEKHAMETLKVLESM |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (3 introns) and 32 ESTs. Unigene compiles ESTs from both haplotypes. incorrect prediction from Phytozome (first exon is missing) |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGGCTTCTTCGTCAGCGGCTCCGCTCTGTGGAGGAGCAGTGCTCGCCGCCGCTGCGCCTCGCAAATCCCCGGCATTGTCCTCCTGCGCAGCGATTCTCCGGCCCCCATGCCTCGCCAGCT CGTCAATCGCCGCGGAATCCAGCTTGTTTCGCAGGGTTTGCGGCCTGGGAGTCGCGAAATCGCCGTCCAGGAGGCTTCTTTCCACGAGCTGCAAGGTAAGATGCCCGCATTGCGAGGATT TTCCCAAAAAAATTGCGAGTGCCAATCTTGGGATGGATGGATTCCTGAGAAGATTCATAGTGTAGGGCTCTGAGCAAGGGATTACGTGCAGCTGAGCCAGGGCGATGTTCTCCCCTCGTT CAATCTCAAGGACCAGGAGGGGCGAGTGGTGAATTCATCCAAGTTTAAGAACAAGCCCGTGGTCTTGTACTTCTATCCGGCCGATGAGTCGCCAGGATGCACCAAAGAGGTAGAAAAAAA ATTAAAATCCTTGCCTTGTCTAATCTCTGATCGATCAGGCTTGCGCGTTTCGGGATTCTTACGATAAATTCAGGAAGGCTGGAGCGGAAGTGATTGGCATCAGTGCCGATACTCCAGAGT CTCACAAGGTACATTGCTTGATTCCCAGCTTCTTTCGTCTTCCAAGGTCTTAGAGATCTTAGAATTTGGACTGCTGGATTGGTTTTGTGTGAGAGTTTTTACGAGCTTTTCGAAGTGGTC ACTGTGTGCTCGAAAGTTTCAAGATTGGATTGTGGTATACTTGGTTTTGAGAGAGCAACTTTGCTCGAAGCTTTTAGCTTTTGTGCTCGATAGTTTGAGATCTACCAAATTGGATTGTGG TATACTTGGTTTTGTGTTTCCATACTTAGTGTTCACTCAAGTTTGTTGATAGTTTCTGGCCAGCCGATCGAAGCTTTTAGTTTTTGTGCTCAAAAGTTTCAGAGATCTTCCAGTTTTGCG AGTTCCGTTGAGTCATTTGCTAAGAATTTTGTTCCCTAGAGATTGGATTGTGTTTCCAATCTTGGTGAGAGTATTTATGAGTTCTCTGATAGTTTCTGCCCAGCCGATCGAAGTATTTAG CTTTAGTGCTCCAAAGTTTCAGAGTTCTAACGTTGGATCTTTCGCTATTCGTAGGCATTCGCGAAGAAATACCGGCTTCCATTCACGCTGCTCACCGACGAAGGAAACAAGCTAAGAAAG GACTGGGGAATCCCCGGCGACTTCTTTGGCTCGCTGCCGGGAAGGCAAACTTACGTGATCGACAAAAAGGGTGTTGTGCGGCTCGTCTTCAACAACCAGTTCCAGCCCGAGAAGCACGCC ATGGAGACGCTCAAGGTTCTCGAAAGCATGTAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TGGCTTCTTCGTCAGCGGCTCCGCTCTGTGGAGGAGCAGTGCTCGCCGCCGCTGCGCCTCGCAAATCCCCGGCATTGTCCTCCTGCGCAGCGATTCTCCGGCCCCCATGCCTCGCCAGCT CGTCAATCGCCGCGGAATCCAGCTTGTTTCGCAGGGTTTGCGGCCTGGGAGTCGCGAAATCGCCGTCCAGGAGGCTTCTTTCCACGAGCTGCAAGCTGAGCCAGGGCGATGTTCTCCCCT CGTTCAATCTCAAGGACCAGGAGGGGCGAGTGGTGAATTCATCCAAGTTTAAGAACAAGCCCGTGGTCTTGTACTTCTATCCGGCCGATGAGTCGCCAGGATGCACCAAAGAGGCTTGCG CGTTTCGGGATTCTTACGATAAATTCAGGAAGGCTGGAGCGGAAGTGATTGGCATCAGTGCCGATACTCCAGAGTCTCACAAGGCATTCGCGAAGAAATACCGGCTTCCATTCACGCTGC TCACCGACGAAGGAAACAAGCTAAGAAAGGACTGGGGAATCCCCGGCGACTTCTTTGGCTCGCTGCCGGGAAGGCAAACTTACGTGATCGACAAAAAGGGTGTTGTGCGGCTCGTCTTCA ACAACCAGTTCCAGCCCGAGAAGCACGCCATGGAGACGCTCAAGGTTCTCGAAAGCATGTAA |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GAAAGCAAAG AAGCCCAAAA CCATGGCTTC TTCGTCAGCG GCTCCGCTCT GTGGAGGAGC AGTGCTCGCC GCCGCTGCGC CTCGCAAATC CCCGGCATTG TCCTCCTGCG CAGCGATTCT
CCGGCCCCCA TGCCTCGCCA GCTCGTCAAT CGCCGCGGAA TCCAGCTTGT TTCGCAGGGT TTGCGGCCTG GGAGTCGCGA AATCGCCGTC CAGGAGGCTT CTTTCCACGA GCTGCAAGCT
GAGCCAGGGC GATGTTCTCC CCTCGTTCAA TCTCAAGGAC CAGGAGGGGC GAGTGGTGAA TTCATCCAAG TTTAAGAACA AGCCCGTGGT CTTGTACTTC TATCCGGCCG ATGAGTCGCC
AGGATGCACC AAAGAGGCTT GCGCGTTTCG GGATTCTTAC GATAAATTCA GGAAGGCTGG AGCGGAAGTG ATTGGCATCA GTGCCGATAC TCCAGAGTCT CACAAGGCAT TCGCGAAGAA
ATACCGGCTT CCATTCACGC TGCTCACCGA CGAAGGAAAC AAGCTAAGAA AGGACTGGGG AATCCCCGGC GACTTCTTTG GCTCGCTGCC GGGAAGGCAA ACTTACGTGA TCGACAAAAA
GGGTGTTGTG CGGCTCGTCT TCAACAACCA GTTCCAGCCC GAGAAGCACG CCATGGAGAC GCTCAAGGTT CTCGAAAGCA TGTAAAGAAA AGCCGCCATT CTTTTCATCG CACCTTCCCT
TCTATATAAA TATGTAAAAC CCGATGTTGC TGTGGACTTC TCCACGCAGA AAATCTCTTG GAATGAAAAA TTCCAAGCTT TGCCTGCTAT AATCTCTCGC AGTGGAATGC TTTAGT
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Retrieve as FASTA
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