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Entry information : PsiKat01
Entry ID 6229
Creation 2008-07-08 (Marcel Zamocky)
Last sequence changes 2008-07-08 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2008-07-09 (Christophe Dunand)
Peroxidase information: PsiKat01
Name PsiKat01
Class Catalase    [Orthogroup: Kat001]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea sitchensis (Sitka spruce)    [TaxId: 3332 ]
Cellular localisation N/D
Tissue types Needles
Roots
Shoots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PsiKat01
start..stop		 S start..stop
PsyKat01 1003 0 1..492 1..492
PpeKat01 926 0 1..492 1..492
GhKat02 923 0 1..492 1..492
PtKat03 922 0 1..492 1..492
Literature and cross-references PsiKat01
Literature Ralph S.G., Kirkpatrick R., Chun H.J.E., Palmquist D., Wynhoven B., Kolosova N., Cooper N., Oddy C., Jancsik S., Ritland C.E., Douglas C.J., Butterfield Y.S.N., Liu J., Stott J., Yang G., Barber S., Holt R.A., Siddiqui A., Jones S.J.M., Marra M.A., Ritland K., Bohlmann J. The spruce transcriptome: Analysis of ca. 6,500 sequence-verified full-length cDNAs.
(unpublished since 2006)
Protein ref. UniProtKB:   A9NUZ2
mRNA ref. GenBank:   EF085146
Cluster/Prediction ref. UniGene:   Psi.6698
Protein sequence: PsiKat01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   492
PWM (Da):   %s   56796.2 Transmb domain:   %s   i13-35o
PI (pH):   %s   7.32
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDPYKHRPSS AYNSPFWTTN SGAPVWNNNS SLTIGSRGPI LLEDYHLVEK IAQFDRERVP ERVVHARGAS AKGFFEVTHD ISHLTCADLL RAPGVQTPLI VRFSTVIHER GSPETLRDPR  GFAVKFYTRE GNFDLVGNNF PVFFVRDGMK FPDMVHALKP NPKSHIQEDW RILDFFSHHP ESLHMFSFLF DDVGVPLNYR HMDGSGVHTF TLVNKAGRQT YVKFHWRPTC GVKCLLEDEA  VVVGGTNHSH ATKDLYDSIA AGNYPEWKLF IQTIDPRDED RYDFDPLDVT KTWPEDIFPL QPVGRMVLNK NIDNFFAENE QLAFSPALVV PGIYYTEDKL LQTRIFSYSD TQRHRLGPNY  LMLPANAPKC AHHNNHHEGF MNFMHRDEEV NYFPSRFDPV RHAERFPIPS HTHSGMREKC VIEKENNFKQ PGERYRSFEP DRQERFVKRW VAALSDPRVT HEICSIWISY WSQSDKSLGQ 
KIAARLNMKA NM 

Retrieve as FASTA  
Remarks Complete sequence from mRNA and 20 ESTs.