Entry information : AtrPrxII06 (AtrPrxIIF)
Entry ID 6234
Creation 2008-07-09 (Christophe Dunand)
Last sequence changes 2008-07-09 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2008-07-09 (Christophe Dunand)
Peroxidase information: AtrPrxII06 (AtrPrxIIF)
Name (synonym) AtrPrxII06 (AtrPrxIIF)
Class Atypical 2-Cysteine peroxiredoxin (type II)     [Orthogroup: PrxII001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type Flower buds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrxII06
start..stop
S start..stop
NtPrxII06a 234 1.45e-80 3..143 53..193
CsPrxII05 233 7.7e-80 4..143 64..203
NtPrxII06b 232 1.77e-79 3..143 53..193
LePrxII04 231 2.2e-79 3..143 50..190
Literature and cross-references AtrPrxII06 (AtrPrxIIF)
Literature dePamphilis,C.W., Leebens-Mack,J.H., Ma,H., Soltis,D.E., Soltis ,P.S. and Clifton,S. Ancestral Angiosperm Genome Project.
EST ref. GenBank:   FD441230 [3' end]
Protein sequence: AtrPrxII06 (AtrPrxIIF)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   143 (295)
PWM (Da):   %s   15467.84 (31059.1)  
PI (pH):   %s   7.51 (4.59) Peptide Signal:   %s   cut: 26 range:26-320
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
LLQFSTTPLS QIFKGRKVVV FGLPGAFTGV CSAQHVPSYK NNAEKFKAKG VHSLVCVAVN DPYVMNGWAE KLNAKEDIDF YGDFDGSFNK SLDLGLDLSS ALLGHRSQRW SAYVVDGKIQ 
AFNVEKVPSE FNVSAGDVML GQI 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. 5' end is missing.