Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
280 (259) |
PWM (Da): |
30274.26 (27979.1) |
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PI (pH):
| 6.65 (6.50) |
Peptide Signal:
| cut: 22 range:22-280 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MTSSFIAIFS LLLLSTMQCH AQLSSTFYDR TCPNALTTIR TSIRQAVSSE RRMAASLIRL HFHDCFVQGC DASLLLDETP TIVSEKTALP NLGSVRGFGV IEDAKREVEK ICPGVVSCAD
ILAVAARDAS SLVGGPSWTV KLGRRDSTTA SHTVAETDLP GPFDPLSRLI SGFANKGLST RDMVALSGSH SIGQAQCFLF RDRIYSNGTD IDAGFASTRR RQCPQEDQNG NLAPLDLVTP
NQLDNNYFKN LRQRKGLLQS DQVLLSGGST DDIVLEYSNS
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Retrieve as FASTA
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Remarks |
Partial sequence from ESTs and genomic (only exon was found in the chromo 11 due to "n" in the sequence) . |
CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACTAGTT CTTTTATTGC TATATTTTCT CTTCTTCTAC TCTCTACCAT GCAATGCCAT GCACAACTTT CTTCCACTTT CTACGACCGA ACTTGCCCTA ATGCTCTCAC CACTATTCGT
ACAAGTATAA GACAAGCAGT TTCAAGCGAA CGTCGTATGG CTGCATCCCT CATTCGTCTT CATTTCCATG ATTGTTTTGT TCAGGGTTGT GATGCTTCTC TCTTGCTTGA TGAAACTCCA
ACTATTGTCA GTGAGAAGAC AGCGCTGCCA AATCTTGGAT CAGTTAGAGG CTTTGGTGTT ATAGAAGATG CAAAAAGAGA GGTTGAGAAA ATATGTCCTG GAGTTGTATC GTGTGCTGAC
ATACTTGCAG TTGCTGCTAG AGATGCATCA AGTCTCGTTG GCGGTCCATC ATGGACAGTG AAACTCGGAA GAAGAGACTC AACCACTGCA AGTCATACTG TTGCGGAAAC TGATCTTCCT
GGTCCTTTTG ATCCTCTTAG TAGGCTTATT TCTGGCTTTG CCAACAAAGG CCTTAGCACA AGGGATATGG TTGCTTTATC AGGATCACAT TCAATTGGAC AAGCACAATG TTTCCTTTTC
CGTGATAGAA TTTATAGCAA TGGAACAGAC ATCGATGCTA TTTGCTAGCA CTAGAAGACG ACAATGTCCT CAAGAAGATC AAAATGGAAA CCTAGCTCCA CTTGATTTGG TAACACCTAA
TCAATTGGAT AACAACTACT TCAAGAATTT GAGGCAAAGA AAAGGCCTTC TTCAATCGGA TCAAGTTCTT TTGAGTGGAG GATCTACCGA TGATATTGTT TTAGAATATA GCAATAGCCC
TCGAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TATCTATAAT TCTTTCAACA AACTTTGCAT TTTAATATCA AAATGACTAG TTCTTTTATT GCTATATTTT CTCTTCTTCT ACTCTCTACC ATGCAATGCC ATGCACAACT TTCTTCCACT
TTCTACGACC GAACTTGCCC TAATGCTCTC ACCACTATTC GTACAAGTAT AAGACAAGCA GTTTCAAGCG AACGTCGTAT GGCTGCATCC CTCATTCGTC TTCATTTCCA TGATTGTTTT
GTTCAGGGTT GTGATGCTTC TCTCTTGCTT GATGAAACTC CAACTATTGT CAGTGAGAAG ACAGCGCTGC CAAATCTTGG ATCAGTTAGA GGCTTTGGTG TTATAGAAGA TGCAAAAAGA
GAGGTTGAGA AAATATGTCC TGGAGTTGTA TCGTGTGCTG ACATACTTGC AGTTGCTGCT AGAGATGCAT CAAGTCTCGT TGGCGGTCCA TCATGGACAG TGAAACTCGG AAGAAGAGAC
TCAACCACTG CAAGTCATAC TGTTGCGGAA ACTGATCTTC CTGGTCCTTT TGATCCTCTT AGTAGGCTTA TTTCTGGCTT TGCCAACAAA GGCCTTAGCA CAAGGGATAT GGTTGCTTTA
TCAGGATCAC ATTCAATTGG ACAAGCACAA TGTTTCCTTT TCCGTGATAG AATTTATAGC AATGGAACAG ACATCGATGC TGGATTTGCT AGCACTAGAA GACGACAATG TCCTCAAGAA
GATCAAAATG GAAACCTAGC TCCACTTGAT TTGGTAACAC CTAATCAATT GGATAACAAC TACTTCAAGA ATTTGAGGCA AAGAAAAGGC CTTCTTCAAT CGGATCAAGT TCTTTTGAGT
GGAGGATCTA CCGATGATAT TGTTTTAGAA TATAGCAATA GCCCTCGAG
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Retrieve as FASTA
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