The peroxidases and oxidases database
Entry information : NfaKat01 (katB)
Entry ID 6295
Creation 2008-07-11 (Marcel Zamocky)
Last sequence changes 2008-07-11 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2008-07-18 (Christophe Dunand)
Peroxidase information: NfaKat01 (katB)
Name (synonym) NfaKat01 (katB)
Class Catalase    [Orthogroup: Kat001]
Taxonomy Bacteria Actinobacteria Actinobacteria (class) Nocardiaceae Nocardia
Organism Nocardia farcinica    [TaxId: 37329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NfaKat01
start..stop		 S start..stop
MavKat01 998 0 16..719 19..721
SerKat02 942 0 25..719 8..701
FspKat01_CcI3 906 0 23..719 13..709
SroseKat01 905 0 25..719 9..690
Literature and cross-references NfaKat01 (katB)
Literature Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K., Shiba T., Hattori M. The complete genomic sequence of Nocardia farcinica IFM 10152. Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004).
Protein ref. UniProtKB:   Q5YW87
DNA ref. GenBank:   AP006618 (2871671..2873830)
Protein sequence: NfaKat01 (katB)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   719
PWM (Da):   %s   78991.7  
PI (pH):   %s   5.77
Sequence 0
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTGHTPDTPD NAADADHAAG GADRKQRQLD AHRVDREQGH LTTQQGVRVR HTDDALSAGA RGPTLLDDFH AREKITHFDH ERIPERVVHA RGAGAYGYFQ PYDDRLAEYT VAKFLTDPAE  RTPVFVRFST VAGSRGSADT VRDVRGFATK FYTSQGNYDL VGNNFPVFFI QDGIKFPDFV HAVKPEPHNE IPQAASAHDT LWDFVSLQPE TLHAIMWLMS DRALPRSYRM MQGFGVHTFR  FLDAAGTPTF VKFHWTPKLG VHSLVWDECQ QIAGRDPDYN RRDLWDCIEA GHYPEWELGV QLIPVEKEFD FDFDLLDATK LVPEEQVPVL PVGRMVLDRN PDNFFAETEQ VAFHTANLVP  GIDFTDDPLL QLRNFSYLDT QLIRLGGPNF AQIPINRPVA DVRNHQQDGY GQHAIPRGQA SYTVNSIGGG CPVVGGDGSY EHYPRQVDGR AQRRRAESFR EYYRQPRMFW RSMSAPEAEH  IVEAFAFELG KVQRVEIRER TLGQLVRIDP DLAVRVAGRL GLPAPPPDPE AGTDAFVSPA LSQAHTAKDS IATRQVAVLA ADGVDAAGVR ALRSALTERG AIVEVIASHG GMVHADGGDG 
DTLPVDRTLM TVASVLYDGV VVAGGQTGVE TLTRNGEAVH FVLEAFKHAK PVAAFGAGVS LLRIAGILDA ARAHDADPAT GVITTEARGD GLDEEFVTDL ARALANHRTW QRATSAIPA 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="IFM 10152".