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Entry information : LePrx38(Solyc02g094180.2.1[2.3]/ CG5)
Entry ID 636
Creation 2006-08-07 (Christophe Dunand)
Last sequence changes 2014-08-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-03-04 (Christophe Dunand)
Peroxidase information: LePrx38(Solyc02g094180.2.1[2.3]/ CG5)
Name LePrx38(Solyc02g094180.2.1[2.3]/ CG5)
Class Class III peroxidase    [Orthogroup: Prx031]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue types Cell culture
Fruits
Leaves
Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx38
start..stop		 S start..stop
NtPrx44-1B 607 0 1..325 30..354
NtPrx44-1A 594 0 1..326 1..326
IaquPrx45 538 0 1..325 3..330
VvPrx65 527 0 1..325 1..323
Literature and cross-references LePrx38(Solyc02g094180.2.1[2.3]/ CG5)
Literature Dong W, Kieliszewski M, Held MA.Identification of the pI 4.6 extensin peroxidase from Lycopersicon esculentum using proteomics and reverse-genomics. Phytochemistry. 2015 Apr;112:151-9.
Cluster/Prediction ref. UniGene:   les.23864
Protein sequence: LePrx38(Solyc02g094180.2.1[2.3]/ CG5)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   325 (302)
PWM (Da):   %s   35362.62 (32811.1) Transmb domain:   %s   i7-26o
PI (pH):   %s   4.65 (4.61) Peptide Signal:   %s   cut: 24 range:24-325
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MERLRGLYVL ILAIILILGG AEGELVENFY GFTCPNVEFI VQQAVSLKFS QTFVTIPATL RLFFHDCFVE GCDASVMIAS PNGDAEKDSK DNLSLAGDGF DTVVKAKQAV EAQCPGVVSC  ADILAIATRD VVVLAGGPSY NVELGRRDGL ISQASRVAGK LPEPDFNLIQ LNTMFARHNL SQFDMIALSG AHTLGFSHCD RFANRLYSFT PSNPVDPSLD PEYAKELKDM CPQNVDPTIA 
INMDPATPRT FDNEYYKNLV KGKGLFTSDQ VLFTDESSQG TVSDFANNAF DFNGAFVTAM RKLGRVGVKT GGQGEIRLDC TRFNS* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2, introns 1 and 2) and 12 ESTs. Extensin Prx with proteomic evidence.
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGAGAT TGAGGGGCTT GTATGTGTTG ATCTTGGCAA TCATATTGAT CCTCGGCGGA GCTGAAGGGG AGCTAGTAGA GAACTTCTAT GGTTTTACTT GTCCTAATGT GGAATTTATA  GTTCAGCAAG CTGTGTCTCT AAAGTTCAGC CAGACTTTTG TCACTATTCC AGCGACTTTG CGTCTCTTTT TCCATGATTG CTTTGTTGAG GTAATCTTCT GCTACAATTT CTCTCTAGAA  TTAAGCTGTT ACTCATATCG CAGTGTCCCA CATTAGTTCG TTGAATTATG GTATAAGTTT TAGAACAAGC AAGAATAATT ACTCCATTTT TGTTAACATA AAAGAGATCA AGAGACTTCT  AACTCTATAC TTTAAAAATA GCTGCTACCA CCAATATTCT GGGTCCTGTT CTGGTTGGCA GCAAAAAATT GGCATTCTTC GTCTTCCCAA ATTAAAATTG TTCATCTCTT ATTCTCTTTT  GCACATTTCC TCAGGGGTGT GACGCGTCTG TTATGATAGC TTCACCAAAT GGAGACGCGG AAAAGGATTC CAAGGATAAC CTTTCCCTTG CAGGAGATGG CTTTGACACT GTGGTAAAGG  CAAAACAAGC AGTAGAGGCT CAGTGCCCTG GAGTAGTATC ATGTGCAGAT ATCTTAGCTA TCGCCACTAG AGATGTTGTG GTGCTGGTAA TCGAGGACAC AGAAACCATA TACCCCTTTT  TTTTGGCTTT TTCTTCATTT ACCATAATAT GTAGACTGAC ACTAGTTCAT TTCCTTTGGT GAAAACATTC AGGCAGGAGG CCCTTCATAC AATGTAGAAT TGGGACGTCG TGATGGGCTC  ATCTCCCAGG CATCTCGGGT TGCTGGAAAA TTGCCAGAAC CTGACTTCAA TCTCATTCAA CTGAACACTA TGTTTGCCAG ACACAATCTC AGCCAGTTTG ACATGATAGC TCTTTCAGGG  GCTCACACAC TTGGCTTCTC TCATTGTGAC CGTTTTGCAA ACCGTCTCTA CTCATTTACC CCATCCAACC CTGTTGACCC TTCTTTGGAT CCAGAATATG CTAAAGAACT TAAGGATATG  TGCCCTCAAA ATGTAGATCC AACTATCGCT ATAAACATGG ACCCTGCAAC TCCACGAACC TTTGACAATG AGTATTACAA GAATCTGGTT AAAGGAAAGG GTTTGTTCAC CTCAGATCAG  GTGCTCTTCA CTGATGAATC TTCTCAAGGC ACTGTTAGTG ATTTTGCTAA TAATGCTTTC GACTTCAATG GAGCTTTTGT CACTGCAATG AGAAAACTCG GAAGGGTTGG GGTCAAAACT 
GGTGGCCAAG GTGAAATAAG ACTGGACTGC ACCAGGTTTA ACTCATGA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGAGAT TGAGGGGCTT GTATGTGTTG ATCTTGGCAA TCATATTGAT CCTCGGCGGA GCTGAAGGGG AGCTAGTAGA GAACTTCTAT GGTTTTACTT GTCCTAATGT GGAATTTATA  GTTCAGCAAG CTGTGTCTCT AAAGTTCAGC CAGACTTTTG TCACTATTCC AGCGACTTTG CGTCTCTTTT TCCATGATTG CTTTGTTGAG GGGTGTGACG CGTCTGTTAT GATAGCTTCA  CCAAATGGAG ACGCGGAAAA GGATTCCAAG GATAACCTTT CCCTTGCAGG AGATGGCTTT GACACTGTGG TAAAGGCAAA ACAAGCAGTA GAGGCTCAGT GCCCTGGAGT AGTATCATGT  GCAGATATCT TAGCTATCGC CACTAGAGAT GTTGTGGTGC TGGCAGGAGG CCCTTCATAC AATGTAGAAT TGGGACGTCG TGATGGGCTC ATCTCCCAGG CATCTCGGGT TGCTGGAAAA  TTGCCAGAAC CTGACTTCAA TCTCATTCAA CTGAACACTA TGTTTGCCAG ACACAATCTC AGCCAGTTTG ACATGATAGC TCTTTCAGGG GCTCACACAC TTGGCTTCTC TCATTGTGAC  CGTTTTGCAA ACCGTCTCTA CTCATTTACC CCATCCAACC CTGTTGACCC TTCTTTGGAT CCAGAATATG CTAAAGAACT TAAGGATATG TGCCCTCAAA ATGTAGATCC AACTATCGCT  ATAAACATGG ACCCTGCAAC TCCACGAACC TTTGACAATG AGTATTACAA GAATCTGGTT AAAGGAAAGG GTTTGTTCAC CTCAGATCAG GTGCTCTTCA CTGATGAATC TTCTCAAGGC  ACTGTTAGTG ATTTTGCTAA TAATGCTTTC GACTTCAATG GAGCTTTTGT CACTGCAATG AGAAAACTCG GAAGGGTTGG GGTCAAAACT GGTGGCCAAG GTGAAATAAG ACTGGACTGC 
ACCAGGTTTA ACTCATGA 

Retrieve as FASTA