Entry information : ZmAPx03(Zm00001d025047 / GRMZM2G004211 [6a] / APx3)
Entry ID 6379
Creation 2008-10-03 (Christophe Dunand)
Last sequence changes 2011-01-21 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2023-01-03 (Christophe Dunand)
Peroxidase information: ZmAPx03(Zm00001d025047 / GRMZM2G004211 [6a] / APx3)
Name ZmAPx03(Zm00001d025047 / GRMZM2G004211 [6a] / APx3)
Class Ascorbate peroxidase    [Orthogroup: APx2005]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue types Meristems
Ovaries
Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmAPx03
start..stop
S start..stop
SbAPx03 516 0 1..290 1..290
SiAPx10 495 1.4e-179 2..289 4..291
OsAPx03 480 1.32e-173 2..289 3..290
BdiAPx06 460 1.44e-165 3..289 5..293
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6379' 'complement(join(101005464..101005667,101005811..101005913,101006049..101006128,101006238..101006320,101006464..101006512,101006577..101006642,101006718..101006767,101006887..101007011,101007097..101007209))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 101007097..101007209 111 N° 2 101006887..101007011 123 N° 3 101006718..101006767 48 N° 4 101006577..101006642 64
N° 5 101006464..101006512 47 N° 6 101006238..101006320 81 N° 7 101006049..101006128 78 N° 8 101005811..101005913 101
N° 9 101005464..101005667 202  
complement(join(101005464..101005667,101005811..101005913,101006049..101006128,1 01006238..101006320,101006464..101006512,101006577..101006642,101006718..1010067 67,101006887..101007011,101007097..101007209))


exon

Literature and cross-references ZmAPx03(Zm00001d025047 / GRMZM2G004211 [6a] / APx3)
Protein ref. UniProtKB:   B6T684
EST ref. GenBank:   DR972292.1 [5' end]  CF625763.1 [3' end]
Cluster/Prediction ref. UniGene:   Zm.28302
Protein sequence: ZmAPx03(Zm00001d025047 / GRMZM2G004211 [6a] / APx3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   290
PWM (Da):   %s   31939.32 Transmb domain:   %s   o261-283i
PI (pH):   %s   8
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSAPLVDAEYMAEIERARRDLRALVASKNCAPIMLRLAWHDAGTYDAKTNTGGPNGSIRFPQEYSHSSNAGIKIAIDLEPVKQKHPKITYADLYLAGVVAVEVTGGPTVDFVPGRKDSSI
CPEEGRLPDARR
GASHLRQVFYRMGLSDRDIVALSGGHTGRAHRERTGFDGPWTRDPLKFDNSYFLELLKGDSEGLLKLPTDKVLVEDPEFRQHVQLYADEDAFFRDYAESHKKLSELGF
TPPRSCLSSRSANKHKSLLVQAAAGLAVATAVVAWAYLCESNNKFI*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 10, 9 introns) and 6 ESTs. Incorrect prediction from Phytozome due to a probable sequencing error. ACC CCC CC(C)T CGC TCT, (c) has been removed from the genomic sequence to remove the frame shift.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCGCACCCCTGGTGGACGCCGAGTACATGGCCGAGATCGAGAGGGCACGGCGGGACCTCCGCGCTCTCGTCGCCAGCAAGAACTGCGCGCCGATCATGCTCCGCCTCGCGTACGTC
CTCCTCATGAATCGCAATCAATGGCGCGCGGTGCCGAGCGAGCGACCAACAATGGCTCCTTTTCCACGTTGCATGCAGGTGTGGCACGACGCCGGCACTTACGACGCCAAGACCAACACA
GGAGGCCCCAACGGCTCCATAAGGTTCCCACAGGAGTACAGCCACTCTTCAAACGCAGGGATCAAGATCGCCATTGACCTCTTAG
GTCAGTTTGTTTGTTTTTTTTCCCTAGTCCCCCAG
TGCGCAAGCTAAGCTTTCGAAACGTCTCTCCATCGAGCGGACGATCAAGTCTTTTGCGTTGACAGTCTGCTTCCTGCTGCGCAGAGAGCCTGTGAAGCAGAAGCACCCCAAGATCACATA
CGCAGACCTGTATCAG
GTAGTGGTAGTACAGCTATTTACCCAATCCATACGTACTGTACCATGGTTCATTGTGGTGCGTTTCATCGACCAGCTCTCGCCGGAGTTGTCGCCGTCGAAGTC
ACTGGTGGACCGACCGTTGACTTCGTCCCTGGGAGGAAG
GTGAGTTAGTACTACAAGTGGCAGCCTCAGATTCATCATTACTGACACAACTGCTCGTCACCAGGAGATTCTTCGATTTGT
CCAGAGGAAGGACGCTTGCCGGATGCTAGAAGAG
GTTTGCTTCGCAGCACATCATCTTTACAAGTTTCTTCTTTTTTATATATGAAAACACATACAGCAATCGGTATACGCAACAGAGTT
CTTCTGCATTACTGAACCAGCTTCTAATTCTCCTCTCTCTCTCTCTCTCTCTTGAAGGTGTGCTTCGCATCTCAGACAAGTATTCTACCGGATGGGTTTATCAGACAGGGACATTGTGGC
GCTCTCCGGCGGCCATACTCTG
GTACGCAAGAACACCTTTTCTTGTTCATGCATATTACAGCATGATCTCAATCAGATCAACGTGGTGGTTTGGTTCCATTTTATCCGAAATCCGCAATA
CGAATTTTCAGGGGGGAGAGCGCATCGAGAGAGGACAGGGTTTGATGGCCCATGGACTAGGGATCCTCTGAAATTTGACAACTCTTATTTCCTGTAAGCCTTGTGTCGACGAGCATGGCA
CACAGTTGTTGCCTTTATTTTTCTTTCCTCAGATTATTTATGGTTAGTAATACCACAGCACCCTGCTTGTGTCTTATCGCTTCACATCCTATCCTATCTATGATGCAGTGTGAGCTTCTG
AAAGGCGACTCTGAAGGGCTCTTGAAACTCCCTACTGACAAGGTTCTTGTGGAAGATCCTGAATTCCGTCAGCATGTCCAACTATATGCCAAG
GTACACTCATTCATTGCTTGGTGTCAG
TCAAAACAAAAGAACAGTTCATTCATTGCTTGGTGTCAGTCAGTGCTGGCCTACCTCATTTGTATAGCGTCAGTGAGTCGACACTCACACTGATCATTTTGTCAACTTTGTCGCAGGAGA
TGAAGATGCATTTTTCAGGGACTACGCGGAGTCACACAAGAAGCTGTCAGAGCTAGGCTTCACCCCCCCTCGCTCTTGTCTCTCATCCAGATCTGCGAATAAACACAAGTCGTTGCTGGT
GCAAGCTGCAGCTGGGCTCGCAGTTGCTACCGCAGTTGTCGCATGGGCGTACCTGTGCGAATCCAACAACAAGTTCATCTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCGCACCCCTGGTGGACGCCGAGTACATGGCCGAGATCGAGAGGGCACGGCGGGACCTCCGCGCTCTCGTCGCCAGCAAGAACTGCGCGCCGATCATGCTCCGCCTCGCGTGGCAC
GACGCCGGCACTTACGACGCCAAGACCAACACAGGAGGCCCCAACGGCTCCATAAGGTTCCCACAGGAGTACAGCCACTCTTCAAACGCAGGGATCAAGATCGCCATTGACCTCTTAG
AG
CCTGTGAAGCAGAAGCACCCCAAGATCACATACGCAGACCTGTATCAG
CTCGCCGGAGTTGTCGCCGTCGAAGTCACTGGTGGACCGACCGTTGACTTCGTCCCTGGGAGGAAGGATTCT
TCGATTTGTCCAGAGGAAGGACGCTTGCCGGATGCTAGAAGAG
GTGCTTCGCATCTCAGACAAGTATTCTACCGGATGGGTTTATCAGACAGGGACATTGTGGCGCTCTCCGGCGGCCAT
ACTCTG
GGGAGAGCGCATCGAGAGAGGACAGGGTTTGATGGCCCATGGACTAGGGATCCTCTGAAATTTGACAACTCTTATTTCCTTGAGCTTCTGAAAGGCGACTCTGAAGGGCTCTTG
AAACTCCCTACTGACAAGGTTCTTGTGGAAGATCCTGAATTCCGTCAGCATGTCCAACTATATGCCAAG
GATGAAGATGCATTTTTCAGGGACTACGCGGAGTCACACAAGAAGCTGTCA
GAGCTAGGCTTCACCCCCCCTCGCTCTTGTCTCTCATCCAGATCTGCGAATAAACACAAGTCGTTGCTGGTGCAAGCTGCAGCTGGGCTCGCAGTTGCTACCGCAGTTGTCGCATGGGCG
TACCTGTGCGAATCCAACAACAAGTTCATCTAA

Retrieve as FASTA