Entry information : BoPrx61_other
Entry ID 6400
Creation 2008-11-08 (Christophe Dunand)
Last sequence changes 2008-11-08 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-03-05 (Qiang Li)
Peroxidase information: BoPrx61_other
Name BoPrx61_other
Class Class III peroxidase    [Orthogroup: Prx029]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx61_other
start..stop
S start..stop
BrPrx61-1Aa_other 674 0 1..341 1..341
TsPrx61 672 0 1..341 1..341
AlyPrx61 668 0 1..341 1..341
BstrPrx68 666 0 1..341 1..341
Literature and cross-references BoPrx61_other
Literature Delehaunty,K., Fewell,G., Fulton,L., McCombie,W.R., Miner,T., Nash ,W., Rabinowicz,P.D. and Wilson,R.K. Whole genome shotgun reads from Brassica oleracea.
DNA ref. GenBank:   BZ078124 [5' end]   BZ000207 [3' end]   BZ058517 [Fragment]
Protein sequence: BoPrx61_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   341 (315)
PWM (Da):   %s   37305.75 (34484.2) Transmb domain:   %s   i5-27o
PI (pH):   %s   7.99 (7.99) Peptide Signal:   %s   cut: 27 range:27-341
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRQFVLFFPL LAFVVISLAG TATVEAATGL NPPVKLVWHY YKVTNTCDDA ETYIRHQVEN FYRNDSSIAP KLLRLLYSDC MVNGCDASVL LQGPNSERTA PQNRGLGGFV IIDKIKKVLE  TRCPGVVSCA DILNLATRDA VHMAGAPSYP VFTGRRDGGA LSADAVDLPS PSISVEESLA YFNSKGLDVL DMTTLLGAHS MGKTHCSHIV NRLYNFKNTG KPDPTMNTTL VSQLRYLCPP 
RTQKGQTDPL VYLNPDSGSS NRFSSSYYSR VLSHNAVLGV DQQLLYNEDS KEITQEFAAG FEDFRKSFAL AMSRMGSINV LTGKAGEIRR DCRVTNANYG A 

Retrieve as FASTA  
Remarks Complete sequence from GSS (Intron 1, 2 and 3). No EST. Containing motif 'YSDC'.