1. Browse the Database
  2. View Redoxidase
Entry information : TbKat02
Entry ID 6418
Creation 2008-12-12 (Christophe Dunand)
Last sequence changes 2008-12-12 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2009-01-29 (Christophe Dunand)
Peroxidase information: TbKat02
Name TbKat02
Class Catalase     [Orthogroup: Kat001]*
Taxonomy Eukaryota Metazoa Chordata Mammalia Tupaiidae Tupaia
Organism Tupaia belangeri (northern tree shrew)    [TaxId: 37347 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TbKat02
start..stop		 S start..stop
OgaKat 409 8.72e-142 1..294 217..511
SscKat01 404 3.65e-140 1..294 217..511
GgoKat 403 1.22e-139 1..294 217..511
HsKat01 402 1.69e-139 1..294 217..511
Literature and cross-references TbKat02
Literature Lindblad-Toh,K., Chang,J.L., Gnerre,S., Clamp,M. and Lander,E.S. The Genome Sequencing Platform, The Genome Assembly Team Annotating the human genome using low coverage mammalian genomes.
DNA ref. GenBank:   AAPY01711709 [Fragment]
Protein sequence: TbKat02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   289 (331)
PWM (Da):   %s   32362.55 (36032.7)  
PI (pH):   %s   6.69 (5.93) Peptide Signal:   %s   cut: 24 range:24-354
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
SHTCKLVNAN REAIY*KFHY KxNQGIKNLS VEDAVRLSQG DPDYGLRDLV KAFATGNYPF WSFYIQVMTF QQAEPFPFNL FNITEVWLHR DYSLxxxxxx LVSQNPINYF AEV*QVAFHP  CTIPPGIEPS RDKMLQDYLF VYPNTHCHRL GLSYRQMPVN CPFCA*VASY QLDGPMCMCH SQGGTPNYYH SFSTPDQQPS TQEHCACYSA DTQRFNNAKE DNVTQVREIY MNVLNEEQGK 
HLCQNIAGHL KDV*LFTQKK AVKNFADVHP DDWACIHALL DRYNA*EPKN VIHT 

Retrieve as FASTA  
Remarks Partial sequence from genomic 5' and 3' ends are missing and several stop.