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Entry information : TbEPO
Entry ID 6440
Creation 2008-12-29 (Christophe Dunand)
Last sequence changes 2008-12-29 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2008-12-29 (Christophe Dunand)
Peroxidase information: TbEPO
Name TbEPO
Class Eosinophil peroxidase     [Orthogroup: EPO001]*
Taxonomy Eukaryota Metazoa Chordata Mammalia Tupaiidae Tupaia
Organism Tupaia belangeri (northern tree shrew)    [TaxId: 37347 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TbEPO
start..stop		 S start..stop
PtroEPO 1238 0 1..694 1..715
GgoEPO 1238 0 1..694 1..715
HsEPO 1237 0 1..694 1..715
MmEPO 1222 0 1..693 2..715
Literature and cross-references TbEPO
Literature Lindblad-Toh,K., Chang,J.L., Gnerre,S., Clamp,M. and Lander,E.S. The Genome Sequencing Platform, The Genome Assembly Team. Annotating the human genome using low coverage mammalian genomes.
DNA ref. GenBank:   AAPY01742734.1 [Fragment]  AAPY01742733.1 [5' end]  AAPY01364310.1 (1..6589) [3' end]
Protein sequence: TbEPO
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   694 (672)
PWM (Da):   %s   75834.5 (73567.3) Transmb domain:   %s   i180-199o214-236i264-283o293-315i328-350o
PI (pH):   %s   10.7 (10.79) Peptide Signal:   %s   cut: 23 range:23-694
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MQPLLALAGV LAMLTLTQLC EGTTPASPSA VKTSVLQDCI AEAKLLVDTA YNQTQKSIKQ RLRSGSASPM xxxxxxxxxx xxxxxxxxxx xxxxDVLTER QLRLLSQASG CALQDKKEKC  SDKYRTITGR CNNKKIPLLG SSNQALARWL PAEYEDRLSL PFGWTPGKRR NGFRLPLVRE VSNQIVRFPS ERLTSDRGRA LMFMQWGQFI DHDLDFSPES PARVAFTAGV DCEKTCAQLP  PCFPIQIPPN DPRIKNQRDC IPFFRSAPSC PQNRNKVRNQ LNALTSFVDA SMVYGSEVSL ALRLRNRTNY LGLLAINQRF HDNGRALLPF DNLHEDPCLL TNRSARIPCF LAGDTRSSET  PKLAAMHTLF VREHNRLATE LRILNPRWSG DKLYNEARKI VGAMVQIITY RDFLPLVLGQ DRARRTLGPY KGYCPNVDPR VANVFTLAFR FGHTMLQPFM FRLDSQYRAS APNSRVPLSS  AFFASWRIVH EGGIDPILRG LMATPAKLNR QDSMLVDELR DRLFRQVRRI GLDLAALNMQ RSRDHGLPGY NAWRRFCGLS QPRNLAQLSQ VLKNRDLARK FLNLYGTPDN IDIWIGAIAE 
PLLPGARVGP LLACLFENQF RRARDGDRFW WQKRGVFTKR QRRALRQVSL SRIVCDNSGI TTVSRDIFKA NIYPQDFVHC SSLPRLNLSA WRGT 

Retrieve as FASTA  
Remarks Partial sequence from genomic (11 introns). 3rd exon is missing.