Entry information : MtPrx[P]101 ( Medtr5g058120.1[4.0] / Medtr5g058120.1[3.5] / Medtr5g066210.1[3.0])
Entry ID 6443
Creation 2008-12-29 (Christophe Dunand)
Last sequence changes 2014-07-31 (Messaoudi)
Sequence status theoretical translation / pseudogene
Reviewer Catherine Mathe
Last annotation changes 2016-05-04 (Catherine Mathe)
Peroxidase information: MtPrx[P]101 ( Medtr5g058120.1[4.0] / Medtr5g058120.1[3.5] / Medtr5g066210.1[3.0])
Name (synonym) MtPrx[P]101 ( Medtr5g058120.1[4.0] / Medtr5g058120.1[3.5] / Medtr5g066210.1[3.0])
Class Class III peroxidase     [Orthogroup: Prx163]*
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MtPrx[P]101
start..stop
S start..stop
MtPrx75 288 8e-99 1..184 146..332
GmPrx36 233 3e-77 1..185 141..330
PvPrx16 233 4e-77 1..179 150..333
GmPrx329 186 8e-59 3..184 145..329
Literature and cross-references MtPrx[P]101 ( Medtr5g058120.1[4.0] / Medtr5g058120.1[3.5] / Medtr5g066210.1[3.0])
DNA ref. Phytozome 12:   chr5 (24012809..24013001)
Cluster/Prediction ref. Phytozome Gene 12:   31087584 [Incorrect prediction]
Protein sequence: MtPrx[P]101 ( Medtr5g058120.1[4.0] / Medtr5g058120.1[3.5] / Medtr5g066210.1[3.0])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   185
PWM (Da):   %s   20423.11  
PI (pH):   %s   5.21
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
QLGGPDFDVP LGRSDSITFN MxTAPDNLPV PFEGTDEQLR LFQSRKFDAT DLVALSGEHT FGRSHCPITI DTNPPIDPNF KKQLEATCPN DQSLNTINLD ITRRTKFDNM YYINLLNHQG 
VFPSDQDLAS HPTTKEIVNL FASNQNEFSN KFANAFVKVS QLSVLIGNQG EIRKSCFAPS NRQSN 

Retrieve as FASTA  
Remarks Pseudogene (two first exons are missing and stop in frame). Incorrect prediction from Phytozome. No EST.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CAGCTTGGAG GCCCCGACTT TGATGTACCA TTGGGAAGAA GTGACAGTAT AACCTTCAAT ATGTAnACTG CACCAGACAA TCTTCCTGTA CCATTTGAAG GAACCGATGA ACAATTAAGA  CTTTTTCAAT CTAGAAAATT TGATGCTACA GATTTAGTTG CTCTATCTGG GGAACACACT TTTGGTCGAT CCCATTGTCC TATAACCATT GATACAAACC CACCAATAGA CCCAAATTTC  AAAAAACAAC TCGAAGCGAC ATGTCCGAAT GACCAATCAC TGAACACAAT TAACTTGGAT ATTACAAGAC GAACGAAGTT CGATAACATG TACTATATTA ATCTCTTGAA CCACCAGGGT  GTGTTTCCAT CTGATCAAGA TTTGGCAAGT CATCCTACGA CTAAGGAGAT TGTGAACCTC TTTGCTTCCA ACCAGAATGA GTTTTCTAAT AAATTTGCTA ATGCTTTTGT TAAAGTTAGC 
CAATTGAGTG TTTTGATTGG AAATCAAGGA GAAATTCGAA AGTCATGCTT TGCTCCAAGT AATCGGCAAT CTAAT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CAGCTTGGAG GCCCCGACTT TGATGTACCA TTGGGAAGAA GTGACAGTAT AACCTTCAAT ATGTAnACTG CACCAGACAA TCTTCCTGTA CCATTTGAAG GAACCGATGA ACAATTAAGA  CTTTTTCAAT CTAGAAAATT TGATGCTACA GATTTAGTTG CTCTATCTGG GGAACACACT TTTGGTCGAT CCCATTGTCC TATAACCATT GATACAAACC CACCAATAGA CCCAAATTTC  AAAAAACAAC TCGAAGCGAC ATGTCCGAAT GACCAATCAC TGAACACAAT TAACTTGGAT ATTACAAGAC GAACGAAGTT CGATAACATG TACTATATTA ATCTCTTGAA CCACCAGGGT  GTGTTTCCAT CTGATCAAGA TTTGGCAAGT CATCCTACGA CTAAGGAGAT TGTGAACCTC TTTGCTTCCA ACCAGAATGA GTTTTCTAAT AAATTTGCTA ATGCTTTTGT TAAAGTTAGC 
CAATTGAGTG TTTTGATTGG AAATCAAGGA GAAATTCGAA AGTCATGCTT TGCTCCAAGT AATCGGCAAT CTAAT 

Retrieve as FASTA