Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
185 |
PWM (Da): |
20423.11 |
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PI (pH):
| 5.21 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
QLGGPDFDVP LGRSDSITFN MxTAPDNLPV PFEGTDEQLR LFQSRKFDAT DLVALSGEHT FGRSHCPITI DTNPPIDPNF KKQLEATCPN DQSLNTINLD ITRRTKFDNM YYINLLNHQG
VFPSDQDLAS HPTTKEIVNL FASNQNEFSN KFANAFVKVS QLSVLIGNQG EIRKSCFAPS NRQSN
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Retrieve as FASTA
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Remarks |
Pseudogene (two first exons are missing and stop in frame). Incorrect prediction from Phytozome. No EST. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CAGCTTGGAG GCCCCGACTT TGATGTACCA TTGGGAAGAA GTGACAGTAT AACCTTCAAT ATGTAnACTG CACCAGACAA TCTTCCTGTA CCATTTGAAG GAACCGATGA ACAATTAAGA
CTTTTTCAAT CTAGAAAATT TGATGCTACA GATTTAGTTG CTCTATCTGG GGAACACACT TTTGGTCGAT CCCATTGTCC TATAACCATT GATACAAACC CACCAATAGA CCCAAATTTC
AAAAAACAAC TCGAAGCGAC ATGTCCGAAT GACCAATCAC TGAACACAAT TAACTTGGAT ATTACAAGAC GAACGAAGTT CGATAACATG TACTATATTA ATCTCTTGAA CCACCAGGGT
GTGTTTCCAT CTGATCAAGA TTTGGCAAGT CATCCTACGA CTAAGGAGAT TGTGAACCTC TTTGCTTCCA ACCAGAATGA GTTTTCTAAT AAATTTGCTA ATGCTTTTGT TAAAGTTAGC
CAATTGAGTG TTTTGATTGG AAATCAAGGA GAAATTCGAA AGTCATGCTT TGCTCCAAGT AATCGGCAAT CTAAT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CAGCTTGGAG GCCCCGACTT TGATGTACCA TTGGGAAGAA GTGACAGTAT AACCTTCAAT ATGTAnACTG CACCAGACAA TCTTCCTGTA CCATTTGAAG GAACCGATGA ACAATTAAGA
CTTTTTCAAT CTAGAAAATT TGATGCTACA GATTTAGTTG CTCTATCTGG GGAACACACT TTTGGTCGAT CCCATTGTCC TATAACCATT GATACAAACC CACCAATAGA CCCAAATTTC
AAAAAACAAC TCGAAGCGAC ATGTCCGAAT GACCAATCAC TGAACACAAT TAACTTGGAT ATTACAAGAC GAACGAAGTT CGATAACATG TACTATATTA ATCTCTTGAA CCACCAGGGT
GTGTTTCCAT CTGATCAAGA TTTGGCAAGT CATCCTACGA CTAAGGAGAT TGTGAACCTC TTTGCTTCCA ACCAGAATGA GTTTTCTAAT AAATTTGCTA ATGCTTTTGT TAAAGTTAGC
CAATTGAGTG TTTTGATTGG AAATCAAGGA GAAATTCGAA AGTCATGCTT TGCTCCAAGT AATCGGCAAT CTAAT
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Retrieve as FASTA
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