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Entry information : LePrx48 (Solyc07g017880.2.1[2.3])
Entry ID 646
Creation 2005-09-15 (Christophe Dunand)
Last sequence changes 2014-08-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-08-27 (Christophe Dunand)
Peroxidase information: LePrx48 (Solyc07g017880.2.1[2.3])
Name (synonym) LePrx48 (Solyc07g017880.2.1[2.3])
Class Class III peroxidase    [Orthogroup: Prx032]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue types Callus
Crown gall
Seeds
Stems
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx48
start..stop		 S start..stop
StPrx18 659 0 1..329 4..332
NtPrx03-1A 597 0 1..329 1..329
NtPrx03-1B 592 0 1..329 1..329
IaquPrx36 526 0 11..329 6..322
Literature and cross-references LePrx48 (Solyc07g017880.2.1[2.3])
Literature Alcala,J. et al., unpublished
Cluster/Prediction ref. UniGene:   Les.22748
Protein sequence: LePrx48 (Solyc07g017880.2.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (303)
PWM (Da):   %s   36257.38 (33232.8) Transmb domain:   %s   i7-26o
PI (pH):   %s   9.6 (9.46) Peptide Signal:   %s   cut: 27 range:27-329
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MENQKKISNL FFVMLLILSV SSIAFGQLKT DFYKNTCPNV ESLVRSAVRL KFQQTFVTAP ATLRLFFHDC FVRGCDASML LSSPNGKAEK DHPDNLSLAG DGFDTVVKAK AAVDSDSKCR  NKVSCADILA LATREVVAMT GGPFYPVELG RRDGKVSTLT SVQHQLPGEG FNLDQLNTMF ARRGLSQTDM IALSGAHTLG FSHCNRVSKR LYNFSPKSSV DPTLNKAYVA QLKQMCPLRV 
DPRIAINMDP TTPNTFDNAY YKNLQQGKGL FVSDQILFTD SRSRNTVNLF ASNNDAFKQA FATAMTKLGR VGVLTGNQGE IRFDCTRPN* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 7, 3 introns) and 6 ESTs.
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGAATC AAAAAAAGAT CAGTAATTTG TTTTTTGTTA TGTTATTAAT TCTAAGTGTT AGTAGTATTG CCTTTGGTCA ATTGAAAACA GACTTTTACA AAAATACATG CCCAAATGTT  GAGTCATTAG TTCGTTCTGC TGTTAGACTG AAATTTCAAC AGACTTTTGT TACGGCTCCA GCGACTCTCC GACTCTTTTT TCATGATTGC TTTGTTCGGG TGCGTTTTCA AATTCATTGA  ATTGTCTCAA TTACAAAAAA AAAAACTAAC ATATAACAAT TTTGAGTGAT TTTAGGGTTG TGATGCATCG ATGCTATTGT CATCACCAAA TGGAAAAGCA GAGAAGGACC ATCCAGATAA  TCTTTCATTA GCTGGTGATG GATTTGATAC TGTTGTCAAA GCCAAAGCAG CTGTGGATAG TGACTCTAAA TGTCGTAACA AAGTATCTTG TGCTGATATT TTAGCTTTGG CTACTAGAGA  AGTTGTTGCT ATGGTAAAAT ACTACTTTTA CTATTCAGTA TATATAGTAT ATTGATGATG TCAAGATAAA ATATGTCGTG TTTCAGTAGA AAGACTGTTC AATTACTGCT TGATCTCATC  AATCTTACGT AATATAATTG TAGACTGGAG GCCCATTTTA TCCGGTGGAG TTGGGCCGTC GTGATGGGAA AGTTTCAACC TTAACCTCAG TCCAACATCA ACTTCCAGGG GAAGGATTCA  ACCTAGACCA GCTCAATACC ATGTTTGCTA GACGTGGCCT TAGCCAAACT GATATGATCG CATTATCAGG TATTTGCTCT GTCCTAATTT AATTATCGTA TGTTTTCTTT TTTTGGCCTA  ATTTCGTTGT ACGCTATTTC TTTCGTTTCA CAAAGAATGA TTTGGTTTGA CTTGGTACAA ATTTTAAGAG TATAAAGAAG ACTTTCGAAT CTTGTGGCCC TAAATTAAAG TTAGGTCAAA  TGTACAAAAT TGTCGTTTGA TTTTGTGGCC TTAAAACATG TCACGTGGAA AACTGAAATT ATAATGTACC AAAAAAAGAA AAAGGTCATT CTTTTTTAAA CAAACTTAAA AGGAAAGGAT  ATCATTCTTT TCGAAACGGA TGGAGTATTT AGTTGAGTAT GTAAACCTTA AACCTGTATA TAAAGTTGAA CAAACAGACA CGCATGTCAA CGTAGCATCC TATGTTGCAA TTTGTGTCTT  ACGTGGTGTA CACCACGTGT TTTATGTCAT ATAAGACTCA TGTATCTACT TATTCAACTA TATACAAATT TAAATGTTTA CTCATAGACA TCTTAAATTG GAGGATATTA AATATTAAGT  GACAGATTTA TGTATCATAC CTTTTTTAAT AGATATTTTA ACATTCTATT ACCTAGCACG ACAAAAAATT CTCTATTTTT TAAATTTGAT ATCGAATCAA ACTAAAACGT TGTTTGAAAT  ATAGGTGCAC ATACTCTTGG TTTCTCTCAT TGCAACCGTG TTTCCAAGAG GCTTTACAAT TTCAGCCCAA AGAGCAGTGT TGACCCGACC CTAAACAAAG CATACGTGGC ACAATTGAAG  CAAATGTGTC CATTACGGGT CGACCCAAGA ATTGCTATTA ACATGGATCC AACAACACCC AATACTTTTG ATAATGCTTA TTATAAAAAC CTTCAACAAG GAAAAGGTCT ATTTGTGTCT  GATCAAATAC TTTTCACTGA CTCAAGATCA AGAAATACTG TCAACTTATT TGCTTCTAAT AATGATGCAT TTAAACAAGC ATTTGCAACA GCAATGACTA AGTTGGGTCG GGTCGGAGTT 
TTGACCGGAA ATCAGGGTGA GATCCGATTC GATTGCACGA GACCAAATTA G 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGAATC AAAAAAAGAT CAGTAATTTG TTTTTTGTTA TGTTATTAAT TCTAAGTGTT AGTAGTATTG CCTTTGGTCA ATTGAAAACA GACTTTTACA AAAATACATG CCCAAATGTT  GAGTCATTAG TTCGTTCTGC TGTTAGACTG AAATTTCAAC AGACTTTTGT TACGGCTCCA GCGACTCTCC GACTCTTTTT TCATGATTGC TTTGTTCGGG GTTGTGATGC ATCGATGCTA  TTGTCATCAC CAAATGGAAA AGCAGAGAAG GACCATCCAG ATAATCTTTC ATTAGCTGGT GATGGATTTG ATACTGTTGT CAAAGCCAAA GCAGCTGTGG ATAGTGACTC TAAATGTCGT  AACAAAGTAT CTTGTGCTGA TATTTTAGCT TTGGCTACTA GAGAAGTTGT TGCTATGACT GGAGGCCCAT TTTATCCGGT GGAGTTGGGC CGTCGTGATG GGAAAGTTTC AACCTTAACC  TCAGTCCAAC ATCAACTTCC AGGGGAAGGA TTCAACCTAG ACCAGCTCAA TACCATGTTT GCTAGACGTG GCCTTAGCCA AACTGATATG ATCGCATTAT CAGGTGCACA TACTCTTGGT  TTCTCTCATT GCAACCGTGT TTCCAAGAGG CTTTACAATT TCAGCCCAAA GAGCAGTGTT GACCCGACCC TAAACAAAGC ATACGTGGCA CAATTGAAGC AAATGTGTCC ATTACGGGTC  GACCCAAGAA TTGCTATTAA CATGGATCCA ACAACACCCA ATACTTTTGA TAATGCTTAT TATAAAAACC TTCAACAAGG AAAAGGTCTA TTTGTGTCTG ATCAAATACT TTTCACTGAC  TCAAGATCAA GAAATACTGT CAACTTATTT GCTTCTAATA ATGATGCATT TAAACAAGCA TTTGCAACAG CAATGACTAA GTTGGGTCGG GTCGGAGTTT TGACCGGAAA TCAGGGTGAG 
ATCCGATTCG ATTGCACGAG ACCAAATTAG 

Retrieve as FASTA