View Redoxidase 6460

Entry information : ZmPrx115(Zm00001d052336 / AC197758.3_FG004 / Peroxidase 52)

Entry ID	6460
Creation	2009-01-09 (Christophe Dunand)
Last sequence changes	2009-01-09 (Christophe Dunand)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2023-01-03 (Christophe Dunand)

Peroxidase information: ZmPrx115(Zm00001d052336 / AC197758.3_FG004 / Peroxidase 52)

Name

ZmPrx115(Zm00001d052336 / AC197758.3_FG004 / Peroxidase 52)

Class

Class III peroxidase [Orthogroup: Prx006]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea

Organism

Zea mays [TaxId: 4577 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	ZmPrx115 start..stop	S start..stop
SbPrx83	595	0	28..360	1..331
SiPrx111	581	0	55..360	27..331
ZmPrx64	576	0	59..360	18..320
SiPrx54	573	0	36..360	2..321

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6460' 'join(183941695..183942024,183942146..183942337,183942409..183942574,183943709..183944103)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	183941695..183942024	328	N° 2	183942146..183942337	190	N° 3	183942409..183942574	164	N° 4	183943709..183944103	393
join(183941695..183942024,183942146..183942337,183942409..183942574,183943709..1 83944103)

Literature and cross-references ZmPrx115(Zm00001d052336 / AC197758.3_FG004 / Peroxidase 52)

Literature	Wilson,R.K., Ko,A., Marchetto,P. and Ochoa,K. The sequence of Zea mays bac clone ZMMBBb-584M17. Unpublished.
Protein ref.	UniProtKB: B6U6W0
DNA ref.	GenBank: AC197758.3 (97266..99684)
mRNA ref.	GenBank: EU972975
EST ref.	GenBank: BM737349 BQ163439

Protein sequence: ZmPrx115(Zm00001d052336 / AC197758.3_FG004 / Peroxidase 52)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	360
PWM (Da):	37452.7
PI (pH):	8.1

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MLAHQLAHLILQGRRKHTAAGAALISTMAPAAPASATKCSSGIVISVLLPLALLMAAAGTSSAQLSTGFYSSSCPGVYDAVKSVVQSAVASEQRMGASIVRLFFHDCFVQGCDASLLLDD
TPSFQGEKMANPNNGSVRGFEVIDAVKSAVEKVCPGVVSCADILAIAARDSVVILGGPTWDVKVGRRDSTTASFSGANNNIPPPTSGLANLTSLFAAQGLSQKDMVALSGAHTIGQARCT
NFRAHVYNDTNIDGSFARTRQSGCPRSSGSSGDNNLAPLDLQTPTVFENNYYKNLVCKKGLLHSDQELFNGGATDALVQSYASGQSEFFSDFVTGMVKMGDITPLTGSGGQIRKNCRRVN

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 4, 3 introns) and 2 ESTs. (BM737349, BQ163439 both compiled in Zm.84700).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCTCGCTCACCAGCTAGCCCATCTCATTCTACAGGGAAGACGAAAACACACTGCAGCTGGAGCAGCACTGATATCGACCATGGCTCCAGCAGCACCTGCATCTGCGACAAAATGCAGC
AGCGGCATCGTCATCTCTGTGCTCTTGCCCCTCGCGCTGCTAATGGCGGCCGCCGGCACCTCGTCGGCGCAGCTGTCCACGGGCTTCTACTCTTCCTCGTGTCCCGGCGTGTACGACGCC
GTCAAGTCGGTGGTGCAGTCCGCCGTCGCCAGCGAGCAGCGCATGGGCGCCTCCATCGTCCGCCTCTTCTTCCACGACTGCTTCGTCCAGAGGTACGTTATTACGTGTATGGTGGTGTGG
ATCGATCGACCATGTAGGTATGCACGCATGTTGTTGTGCTGCTTGATCTGTGACTGTGATCCGCGTGCATGTAATGTATGTATGTATATATAGGGCTGCGACGCGTCGCTGCTGCTGGAC
GACACGCCTAGCTTCCAGGGAGAGAAGATGGCCAACCCTAACAACGGCTCCGTGAGGGGATTCGAGGTCATCGACGCCGTCAAGTCCGCCGTCGAGAAGGTGTGCCCCGGCGTCGTCTCC
TGCGCCGACATCCTCGCCATCGCCGCCAGGGACAGCGTCGTCATCTCGTGAGTACTGCTGAGGTTCTGTGTCAACAAGAGTGACGGATGAATGCTGATGCTGGTCTATCCACATGCAGCT
GGGTGGTCCGACCTGGGACGTGAAGGTCGGGCGGCGGGACTCCACGACGGCGAGCTTCAGCGGCGCCAACAACAACATCCCGCCGCCGACGTCGGGCCTCGCCAACCTCACGTCGCTCTT
CGCCGCCCAAGGCCTCTCCCAAAAGGACATGGTCGCGCTCTCCGCGGTGCGTACTATTATTCTCATATGCACGTTCTACAAATTAAAAAAACTACGTATTCTTTAGTTAATTTAATTTCT
CATATATATATATATATATATATATATATATATATATCGTTATATTACAAGGAGGCAGGCATATATACAAGAATATAGCAACAGCTACCCTTTCCAGCTGAAAGATGGAGCTTAAATAAT
GTACCTTTACCAAAGTGACCTTAAATTTATAAAGATGGAAGCCTAATAATAATTTGATAGCTCCGTTTTGACGACGTGGAAGAACAAATTTTACACGCACACTACACAAATTAAATGATT
AGTGTTTGCCCATGTGTGTTCTTCGTATCACTACTAGACAAATATGTTATAAATTGTCATCACATGAAAGTTGGGCCAAAACAGTTATATATGCGCGCTGTTAAAAAAGTTAAAAAAGAT
GACATTACCTCATATTGTCGGCAGGGATTTTCACTGGCGGTTTTATTACGTCATATTGTCGGCAGGGATTTCATCATATCGATTTTCACTGGCGGTTTTATTACGTCGACCGCCAGTGAA
AATCGATTTTCACTGGCGGTCTTCAGTTACCCGCCTGTAAAAATGATGATTTTTACTGACCTCTAGCACTGACGGTTACGATAAACGCCACTAAAAATAGGTTTACGACCGTCAGTATAG
ATCTTCTCTGTACTAGTGACAGTTATATGCGCGCTGTTAAAAAAGTTAAAAGAGATGACATTACCTCATATTGTCGGCAGGGATTTCTTGTCGAAAATTCTTTGCCCAAAAGCTTCAACT
TTATTCTAATTAATCCTGCCTCTAATAACAAGATAGCAACTTTACTGAACTTTCGACGGCTGCAGTGTCTCTTCCACCTAATATCTTAATTCGACGAAATACTAAAGCACATGCAGGTTA
GGTACACACCATACATGTGTGGTTAGCTTAATTCATTCCAAGAATCAGATACCTTTATTTATATTCTCTCTTTTTTTTTACAAATTTATTTAGACAGCGAAAAACAAGACGACGCTTCAA
AAAAGTTCATGTGCTAATTTAATTAAGCGGCAAATAGTTTTTAGATCATGCATGTTTCTCTCTTTTGTTTGTGTAACAATATGCATGCCTCTTCTATCAGGAGCTCACACCATCGGCCAA
GCACGCTGCACCAACTTCAGAGCCCACGTGTACAACGACACCAACATCGACGGCAGCTTCGCAAGAACAAGGCAGTCAGGCTGCCCTAGATCCTCAGGCTCATCAGGCGACAACAACCTG
GCGCCATTGGACCTTCAAACCCCGACCGTCTTCGAGAACAACTACTACAAGAACCTTGTCTGCAAGAAGGGGCTCCTGCACTCCGACCAGGAGCTCTTCAATGGCGGAGCCACCGACGCG
CTGGTCCAGTCCTACGCCAGTGGCCAGAGCGAGTTCTTCTCGGACTTTGTGACGGGCATGGTGAAGATGGGTGACATCACTCCGTTAACTGGCTCCGGTGGGCAGATTAGGAAGAACTGC
AGAAGGGTCAATTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA