The peroxidases and oxidases database
Entry information : ZmPrxII06 (ZmPrxIIF)
Entry ID 6474
Creation 2009-01-15 (Christophe Dunand)
Last sequence changes 2009-01-15 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-12-23 (Marie Brette (Scipio))
Peroxidase information: ZmPrxII06 (ZmPrxIIF)
Name (synonym) ZmPrxII06 (ZmPrxIIF)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue types Endosperm
Meristems
Pollens
Roots
Seedlings
Shoots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmPrxII06
start..stop		 S start..stop
SbPrxII06 339 6e-121 1..193 1..193
OsPrxII06 319 4e-113 28..193 33..198
EgrPrxII02 307 2e-108 1..193 1..196
EguPrxII02 305 2e-107 1..193 1..196
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 39292343..39292534 192 N° 2 39292650..39292679 30 N° 3 39293363..39293521 159 N° 4 39294149..39294243 95
N° 5 39294686..39294791 106  
join(39292343..39292534,39292650..39292679,39293363..39293521,39294149..39294243 ,39294686..39294791)


exon

Literature and cross-references ZmPrxII06 (ZmPrxIIF)
DNA ref. GenBank:   AC210940.3
Cluster/Prediction ref. UniGene:   Zm.2019
Protein sequence: ZmPrxII06 (ZmPrxIIF)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   193 (339)
PWM (Da):   %s   20609.65 (35212.3)  
PI (pH):   %s   8.66 (4.26) Peptide Signal:   %s   cut: 19 range:19-357
Sequence 378
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAATLARRAGRSAATTLWGAARGFASVGSDIVSAAPGVSLQKARSWDEGVATKFSTTPLKDIFYGKKVVIFGLPGAYTGVCSQAHVPSYKKNIDKLKAKGIDSVICVAVNDPYVLDGWAKKLDAKDTIEFYGDFDGSFHKSLDLEIDLSAALLGRRSHRWSAFVDDGKIKSFNVEEAPSDFKVSGAEVILDQI

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 3, 3 introns), 6 RNA and 210 ESTs. Also found in AC203784.3.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCGACGCTGGCGAGGAGGGCGGGGCGCTCCGCGGCGACGACGCTATGGGGCGCGGCGAGGGGCTTCGCATCGGTGGGGTCCGACATCGTCTCTGCGGCTCCCGGCGTGTCGCTG
CAGAAGGCGCGGTCCTGGGACGAGGGCGTCGCCACCAAGTTCTCTACCACGCCTCTCAAGGACATCTTCTACGTTCGTAGCGCCGCTCCTCCTCCACCGCTCGTGTCGTCTTCTGCTAGA
TAGTCCATACAGGCCAATTCAGTCGTGTTGACCCGGGATTCTTTGCTTGCTGTCCTTGTGCTTGCAGGGGAAGAAGGTGGTCATCTTCGGCTTGCCCGTAAGTTCCCCTCCCCACTACTT
CCATTCTGCTCTCCATGTACATGTCTGGTCATTTAGGATCGCTAGATGAGGCCTTTATTTACATTGGTGCGGAATTGTTTTACTAGGTTTGCTAGTCCTGAATCTACATTTGGGAATTAG
GGATGCCTCAGCGGAACGTTAATCATGGGTTTTTTTTTTTTTTTTTTTGCTGTTAGAACGATCTGGGAAATATACGTAGGAATTGGGAATGGGAAGTTATGTTGTTTCAGTGACCATGGT
GAAATCCGAATGATGTATCTTATATATATTAGATGACGTTTCTACAAACTAGAGGTGTTCATCTCTGATGCCTAGGAGAAAACATTACATTTCATTCGTCTCATCTGATGTGGCAACAAG
GATAGGTGTACTCCATTATACTCAATGACAATGTTGTAAGAGCATAACACAGAATCCATGTTTCTTTTTCTAAGCCATGACAAAAAATTGTGATTGTGACACATTACACCCTACTCCCAG
AGTTTCTAGTCATTGTTGTTTACTTGGCGATCCAGTCCATTGGAATTTGTAAATTTACACCTTTGGTATTGTTTTTTCGTATTGCCTTTCTCTATATTTTATTCTGAAAGGCAGAATTAT
CTCTCTTCAAATGTTCTAATGACTACATGGTTTGGCAACTGTCTTTTCAATTTATTGAAGGGTGCATATACAGGGGTTTGTTCACAAGCGCACGTTCCTAGTTACAAGAAGAATATTGAC
AAGTTGAAAGCAAAAGGAATCGACTCTGTTATCTGTGTAGCTGTGAATGATCCGTATGTCCTGGATGGATGGGCAAAAAAGCTAGACGCTAAAGATACAGTAAGTAGCTATCCTTTAATC
TTTATTCTTTATATGTCTTATTAGCAATTTAGCTCATAATCTGAAATATAATGAGGGCATATAACATGTGTATCCAAGTATTGTGCTATTATCAATGTATAGGACTATTTGCCTTTTGCT
GTCAGGTGTTGGTGCTTATTTGGAGTTCCAACTACATAAATGTTTGTCGTCATTATATTCCCTTCCTACTCTCAGTAATTCGTTACTACTTACTACTAAGGATTGTCCAATATGCCATCA
ACATGTGATGTTTTCCTTGTTCTGCCACCTAATATGCTTAATCACAGCCCTAAATTATTGATACTGTACATCAAATATGGTGCTTTTTCATACTTATGCTGCACTTCACCTTGGTGCATA
AAACTACCAAATGCAAATTTCATGCTGTGTCTCATAAAGCTCACCCAAATTTCTTTATACTGATGAATGATCTAATTTAAACTTAGAATTTATGGGAAACATGTTTGGTGTATCATCTTA
GGATCTTAATGAAAAAAACTATGAATTGAGTATGTGCAGTTGCTACTTATTATCTATATTAATTCTCTCGAGATCATGTGCATATTCATATTTTTTTTCTATGTGCAATTATTTTGGAAA
ATATAGATTGAGTTCTATGGTGACTTTGATGGGAGTTTCCACAAAAGCTTGGATTTGGAGATAGACCTTTCTGCTGCTTTGCTTGGCCGCCGTTCTCACAGGTTAATGGACTCAACTTGC
AGAGATTATCAAACTGCTGCCTTTATATTACAGTTGAAGAATTGTGTTATGTAGTTTAATACTGAGTTACTTATCACACTGCCTGATTAGCAAAGCTCCGTTGTCTTCTGAGCTCTGACA
AATTTGTCCTTGTTTAGTCAAATGTCTCTCTGGACACTTTATGTAATTTATTTCCACCACAGCAGAACCGGGTGCTATGGCTGCATAGGAAATTGTGAATGACCACCATATGGTGAAATG
TTGCTTTCGTTTCACTAGGTTGATAATATAATACTGTAGAAGACATCCCAGCCTTACATGATAACAACCGTTCTTAGAGTATCTTTTAAATTTCTCGACTAAGCAAGGAGTGCGTATGAG
TAATGACAATCCATCTTATGCTTGGTTTCTGTCTTCTGGTCTAAACCTTGACAACATTTTTAGGTGGTCCGCCTTTGTTGACGATGGTAAGATCAAGTCTTTCAATGTTGAGGAAGCACC
GTCCGACTTTAAGGTTTCTGGTGCGGAGGTGATCTTGGACCAGATCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCGACGCTGGCGAGGAGGGCGGGGCGCTCCGCGGCGACGACGCTATGGGGCGCGGCGAGGGGCTTCGCATCGGTGGGGTCCGACATCGTCTCTGCGGCTCCCGGCGTGTCGCTG
CAGAAGGCGCGGTCCTGGGACGAGGGCGTCGCCACCAAGTTCTCTACCACGCCTCTCAAGGACATCTTCTACGGGAAGAAGGTGGTCATCTTCGGCTTGCCCGGTGCATATACAGGGGTT
TGTTCACAAGCGCACGTTCCTAGTTACAAGAAGAATATTGACAAGTTGAAAGCAAAAGGAATCGACTCTGTTATCTGTGTAGCTGTGAATGATCCGTATGTCCTGGATGGATGGGCAAAA
AAGCTAGACGCTAAAGATACAATTGAGTTCTATGGTGACTTTGATGGGAGTTTCCACAAAAGCTTGGATTTGGAGATAGACCTTTCTGCTGCTTTGCTTGGCCGCCGTTCTCACAGGTGG
TCCGCCTTTGTTGACGATGGTAAGATCAAGTCTTTCAATGTTGAGGAAGCACCGTCCGACTTTAAGGTTTCTGGTGCGGAGGTGATCTTGGACCAGATCTGA

Retrieve as FASTA