Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
343 (321) |
PWM (Da): |
36880.18 (34315.9) |
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PI (pH):
| 4.49 (4.42) |
Peptide Signal:
| cut: 25 range:23-343 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASFYLASLC IMLLIKFSVT FASGNVVSNK LEKTCIDGVT IALSFGLYLN SCPEAEAIIF SWVESAVSQD PRMAASLLRL HFHDCFVNGC DASVLLDDTS NFSGEKTAGP NLNSLRGFEV
IDNIKADLEY ACPQTVSCAD ILAIAARDSV VLSGGLGWQV QMGRKDSLTA SKTAANNNIP GPNSNVATLV TNFQNLGLSL QDVVTLSGAH TIGKARCATF SSRLNNNNNA GVRNSEMNLD
FLQSLQQLCS ANNNTTLANL DDMTPSTFDN HYYVNLLSGK GLLVSDQVLA TGDDDNTREI VQNYVDDPSL FLEDFKNSML KMGSLPPPTG TNGEIRVNCR VIN*
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 1, introns 1 and 2) and 2 ESTs. Incorrect prediction from Phytozome (short PS is missing). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCCT TCTACTTAGC TTCTTTGTGC ATTATGCTAC TGATCAAGTT TTCAGTAACA TTTGCAAGTG GAAATGTTGT TTCAAATAAG TTGGAGAAAA CATGCATTGA TGGTGTAACT
ATCGCGTTAA GTTTTGGTTT GTACCTAAAC AGCTGCCCAG AAGCTGAAGC TATAATCTTT TCATGGGTGG AAAGTGCAGT GTCCCAGGAC CCCAGAATGG CTGCTTCTTT GCTTCGTCTT
CATTTCCATG ACTGTTTCGT TAATGCAAGT CACATATTAT TTCTTCCGTC TTTTCTTTTG TGTGTAAATA AATATTTTCC ATGTTTAATA TTTATGTTGA ATATATTTCA GGGATGTGAC
GCATCAGTAC TCCTGGACGA TACCTCTAAT TTCAGCGGAG AGAAAACAGC TGGACCAAAC TTGAACTCAT TAAGGGGTTT TGAAGTGATT GATAACATCA AGGCTGACCT AGAATATGCT
TGTCCCCAGA CTGTATCTTG TGCTGATATT CTTGCTATTG CTGCTAGAGA TTCTGTTGTC CTAGTATATC CTCTTGCTTT AAAATGATGT TGAATTAAAA TAAGAGAAAA GACTCAAATA
TGCCATCGAA CTTTGAGAAA AATCTCAAGT TAAAAGTTCG GCTCACATTT CTGTTTGAGA AAAGATTCAT CCATGCCTTT ATTAATTAAT TAAATGACTT TCTTAAAAAA TAATTTAATT
TAAGACATGA TCAAATCATA ATTGATTAAG AGTAAAATCG GAACTTTTTT CAGTTAACAA ATAATGACAT TTTCTCAAAC GGAAATGACA GATAAACCAA AATTTTGACA GATGAGATAA
ATGAATCTTT TCTCAAAGTT CGATGACATA TTTGAGCTTT TCCCCTTAAA ATAATGTTTG GAATTTTCGA TTTATGCATT CATTGCAGTC AGGAGGCTTG GGATGGCAAG TGCAAATGGG
GAGAAAGGAT AGCTTAACAG CAAGCAAAAC AGCAGCAAAT AACAACATCC CAGGACCAAA CTCAAATGTA GCAACCCTTG TTACCAACTT TCAAAATCTT GGTCTGTCTC TTCAAGACGT
GGTCACTCTA TCAGGTGCAC ATACAATTGG AAAGGCTAGA TGTGCTACAT TCAGCTCCAG GCTAAACAAC AACAACAACG CGGGTGTTAG AAATTCAGAA ATGAACTTGG ATTTCTTGCA
GTCACTGCAA CAACTGTGCT CAGCTAACAA TAACACTACA CTAGCAAATC TTGATGATAT GACTCCATCA ACGTTCGATA ATCACTACTA TGTTAATCTT CTATCAGGAA AAGGTTTGCT
TGTTTCTGAC CAAGTCCTAG CAACTGGAGA TGACGATAAC ACTAGAGAAA TTGTGCAGAA TTATGTAGAC GATCCATCTT TGTTTCTTGA GGATTTCAAA AACTCTATGC TCAAAATGGG
AAGCTTACCA CCACCAACTG GAACAAATGG CGAAATCCGT GTTAATTGTA GGGTTATTAA TTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCCT TCTACTTAGC TTCTTTGTGC ATTATGCTAC TGATCAAGTT TTCAGTAACA TTTGCAAGTG GAAATGTTGT TTCAAATAAG TTGGAGAAAA CATGCATTGA TGGTGTAACT
ATCGCGTTAA GTTTTGGTTT GTACCTAAAC AGCTGCCCAG AAGCTGAAGC TATAATCTTT TCATGGGTGG AAAGTGCAGT GTCCCAGGAC CCCAGAATGG CTGCTTCTTT GCTTCGTCTT
CATTTCCATG ACTGTTTCGT TAATGGATGT GACGCATCAG TACTCCTGGA CGATACCTCT AATTTCAGCG GAGAGAAAAC AGCTGGACCA AACTTGAACT CATTAAGGGG TTTTGAAGTG
ATTGATAACA TCAAGGCTGA CCTAGAATAT GCTTGTCCCC AGACTGTATC TTGTGCTGAT ATTCTTGCTA TTGCTGCTAG AGATTCTGTT GTCCTATCAG GAGGCTTGGG ATGGCAAGTG
CAAATGGGGA GAAAGGATAG CTTAACAGCA AGCAAAACAG CAGCAAATAA CAACATCCCA GGACCAAACT CAAATGTAGC AACCCTTGTT ACCAACTTTC AAAATCTTGG TCTGTCTCTT
CAAGACGTGG TCACTCTATC AGGTGCACAT ACAATTGGAA AGGCTAGATG TGCTACATTC AGCTCCAGGC TAAACAACAA CAACAACGCG GGTGTTAGAA ATTCAGAAAT GAACTTGGAT
TTCTTGCAGT CACTGCAACA ACTGTGCTCA GCTAACAATA ACACTACACT AGCAAATCTT GATGATATGA CTCCATCAAC GTTCGATAAT CACTACTATG TTAATCTTCT ATCAGGAAAA
GGTTTGCTTG TTTCTGACCA AGTCCTAGCA ACTGGAGATG ACGATAACAC TAGAGAAATT GTGCAGAATT ATGTAGACGA TCCATCTTTG TTTCTTGAGG ATTTCAAAAA CTCTATGCTC
AAAATGGGAA GCTTACCACC ACCAACTGGA ACAAATGGCG AAATCCGTGT TAATTGTAGG GTTATTAATT AA
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Retrieve as FASTA
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