The peroxidases and oxidases database
Entry information : LePrx49 (Solyc01g058520.2.1[2.3])
Entry ID 648
Creation 2006-08-07 (Christophe Dunand)
Last sequence changes 2014-08-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-08-27 (Christophe Dunand)
Peroxidase information: LePrx49 (Solyc01g058520.2.1[2.3])
Name (synonym) LePrx49 (Solyc01g058520.2.1[2.3])
Class Class III peroxidase    [Orthogroup: Prx030]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue types Shoot meristems
Shoots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx49
start..stop		 S start..stop
NtPrx90-1A 575 0 1..343 1..334
IaquPrx04 478 2.6e-171 5..343 4..335
PtPrx17 474 1.59e-169 8..343 6..337
InPrx02 471 3.3e-168 5..343 4..334
Literature and cross-references LePrx49 (Solyc01g058520.2.1[2.3])
Literature van der Hoeven,R.S. et al., unpublished
EST ref. GenBank:   AI491138.1 [5' end]   AI491143.1 [3' end]
Protein sequence: LePrx49 (Solyc01g058520.2.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   343 (321)
PWM (Da):   %s   36880.18 (34315.9)  
PI (pH):   %s   4.49 (4.42) Peptide Signal:   %s   cut: 25 range:23-343
Sequence 0
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASFYLASLC IMLLIKFSVT FASGNVVSNK LEKTCIDGVT IALSFGLYLN SCPEAEAIIF SWVESAVSQD PRMAASLLRL HFHDCFVNGC DASVLLDDTS NFSGEKTAGP NLNSLRGFEV  IDNIKADLEY ACPQTVSCAD ILAIAARDSV VLSGGLGWQV QMGRKDSLTA SKTAANNNIP GPNSNVATLV TNFQNLGLSL QDVVTLSGAH TIGKARCATF SSRLNNNNNA GVRNSEMNLD 
FLQSLQQLCS ANNNTTLANL DDMTPSTFDN HYYVNLLSGK GLLVSDQVLA TGDDDNTREI VQNYVDDPSL FLEDFKNSML KMGSLPPPTG TNGEIRVNCR VIN* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, introns 1 and 2) and 2 ESTs. Incorrect prediction from Phytozome (short PS is missing).
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCCT TCTACTTAGC TTCTTTGTGC ATTATGCTAC TGATCAAGTT TTCAGTAACA TTTGCAAGTG GAAATGTTGT TTCAAATAAG TTGGAGAAAA CATGCATTGA TGGTGTAACT  ATCGCGTTAA GTTTTGGTTT GTACCTAAAC AGCTGCCCAG AAGCTGAAGC TATAATCTTT TCATGGGTGG AAAGTGCAGT GTCCCAGGAC CCCAGAATGG CTGCTTCTTT GCTTCGTCTT  CATTTCCATG ACTGTTTCGT TAATGCAAGT CACATATTAT TTCTTCCGTC TTTTCTTTTG TGTGTAAATA AATATTTTCC ATGTTTAATA TTTATGTTGA ATATATTTCA GGGATGTGAC  GCATCAGTAC TCCTGGACGA TACCTCTAAT TTCAGCGGAG AGAAAACAGC TGGACCAAAC TTGAACTCAT TAAGGGGTTT TGAAGTGATT GATAACATCA AGGCTGACCT AGAATATGCT  TGTCCCCAGA CTGTATCTTG TGCTGATATT CTTGCTATTG CTGCTAGAGA TTCTGTTGTC CTAGTATATC CTCTTGCTTT AAAATGATGT TGAATTAAAA TAAGAGAAAA GACTCAAATA  TGCCATCGAA CTTTGAGAAA AATCTCAAGT TAAAAGTTCG GCTCACATTT CTGTTTGAGA AAAGATTCAT CCATGCCTTT ATTAATTAAT TAAATGACTT TCTTAAAAAA TAATTTAATT  TAAGACATGA TCAAATCATA ATTGATTAAG AGTAAAATCG GAACTTTTTT CAGTTAACAA ATAATGACAT TTTCTCAAAC GGAAATGACA GATAAACCAA AATTTTGACA GATGAGATAA  ATGAATCTTT TCTCAAAGTT CGATGACATA TTTGAGCTTT TCCCCTTAAA ATAATGTTTG GAATTTTCGA TTTATGCATT CATTGCAGTC AGGAGGCTTG GGATGGCAAG TGCAAATGGG  GAGAAAGGAT AGCTTAACAG CAAGCAAAAC AGCAGCAAAT AACAACATCC CAGGACCAAA CTCAAATGTA GCAACCCTTG TTACCAACTT TCAAAATCTT GGTCTGTCTC TTCAAGACGT  GGTCACTCTA TCAGGTGCAC ATACAATTGG AAAGGCTAGA TGTGCTACAT TCAGCTCCAG GCTAAACAAC AACAACAACG CGGGTGTTAG AAATTCAGAA ATGAACTTGG ATTTCTTGCA  GTCACTGCAA CAACTGTGCT CAGCTAACAA TAACACTACA CTAGCAAATC TTGATGATAT GACTCCATCA ACGTTCGATA ATCACTACTA TGTTAATCTT CTATCAGGAA AAGGTTTGCT  TGTTTCTGAC CAAGTCCTAG CAACTGGAGA TGACGATAAC ACTAGAGAAA TTGTGCAGAA TTATGTAGAC GATCCATCTT TGTTTCTTGA GGATTTCAAA AACTCTATGC TCAAAATGGG 
AAGCTTACCA CCACCAACTG GAACAAATGG CGAAATCCGT GTTAATTGTA GGGTTATTAA TTAA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCCT TCTACTTAGC TTCTTTGTGC ATTATGCTAC TGATCAAGTT TTCAGTAACA TTTGCAAGTG GAAATGTTGT TTCAAATAAG TTGGAGAAAA CATGCATTGA TGGTGTAACT  ATCGCGTTAA GTTTTGGTTT GTACCTAAAC AGCTGCCCAG AAGCTGAAGC TATAATCTTT TCATGGGTGG AAAGTGCAGT GTCCCAGGAC CCCAGAATGG CTGCTTCTTT GCTTCGTCTT  CATTTCCATG ACTGTTTCGT TAATGGATGT GACGCATCAG TACTCCTGGA CGATACCTCT AATTTCAGCG GAGAGAAAAC AGCTGGACCA AACTTGAACT CATTAAGGGG TTTTGAAGTG  ATTGATAACA TCAAGGCTGA CCTAGAATAT GCTTGTCCCC AGACTGTATC TTGTGCTGAT ATTCTTGCTA TTGCTGCTAG AGATTCTGTT GTCCTATCAG GAGGCTTGGG ATGGCAAGTG  CAAATGGGGA GAAAGGATAG CTTAACAGCA AGCAAAACAG CAGCAAATAA CAACATCCCA GGACCAAACT CAAATGTAGC AACCCTTGTT ACCAACTTTC AAAATCTTGG TCTGTCTCTT  CAAGACGTGG TCACTCTATC AGGTGCACAT ACAATTGGAA AGGCTAGATG TGCTACATTC AGCTCCAGGC TAAACAACAA CAACAACGCG GGTGTTAGAA ATTCAGAAAT GAACTTGGAT  TTCTTGCAGT CACTGCAACA ACTGTGCTCA GCTAACAATA ACACTACACT AGCAAATCTT GATGATATGA CTCCATCAAC GTTCGATAAT CACTACTATG TTAATCTTCT ATCAGGAAAA  GGTTTGCTTG TTTCTGACCA AGTCCTAGCA ACTGGAGATG ACGATAACAC TAGAGAAATT GTGCAGAATT ATGTAGACGA TCCATCTTTG TTTCTTGAGG ATTTCAAAAA CTCTATGCTC 
AAAATGGGAA GCTTACCACC ACCAACTGGA ACAAATGGCG AAATCCGTGT TAATTGTAGG GTTATTAATT AA 

Retrieve as FASTA