Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
174 |
PWM (Da): |
18655.22 |
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PI (pH):
| 5.24 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ICSHDLLGDS CGILFSHPQD STPVYTMELG RAAKLAPEFT KSNVKLIALV TDSTEEHLAW SKDINxLNSD EPTEKCPFPI IDGKDQEGP* HLVGHAGSFR DGRKGMGVRA CGVYFCS**E
TEAVYPATTS SNLDEIRGVV LSLQLTAEER RVLSLQLTLM DKKNGNSYVA GHGGSWL
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Retrieve as FASTA
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Remarks |
Pseudogene (chromo 11). Stop codon in frame, frame shift and ATG is missing. No EST. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATCTGTTCCC ACGACCTTCT AGGAGACTCC TGTGGCATTC TTTTTTCCCA CCCTCAGGAC TCTACACCAG TTTACACCAT GGAGCTTGGC AGAGCTGCAA AGCTGGCACC AGAATTCACC
AAGAGTAATG TCAAGTTGAT TGCCCTTGTA ACAGACAGTA CTGAGGAACA TCTTGCCTGG AGCAAGGATA TCAATGnnCT TAACAGTGAT GAGCCAACAG AAAAATGCCC TTTTCCCATC
ATTGATGGCA AGGATCAGGA AGGACCTTGA CATCTTGTTG GGCATGCTGG ATCCTTCCGA GATGGAAGAA AAGGAATGGG TGTGAGAGCT TGTGGTGTTT ATTTTTGCTC CTGATAAGAA
ACTGAAGCTG TCTACCCAGC TACCACTAGC AGCAACCTGG ATGAGATTCG TGGGGTAGTT CTCTCTCTCC AGCTGACAGC AGAAGAGAGA AGAGTTCTCT CTCTCCAGCT TACCCTGATG
GATAAGAAGA ATGGAAATAG TTATGTTGCT GGGCATGGTG GCTCATGGCT G
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATCTGTTCCC ACGACCTTCT AGGAGACTCC TGTGGCATTC TTTTTTCCCA CCCTCAGGAC TCTACACCAG TTTACACCAT GGAGCTTGGC AGAGCTGCAA AGCTGGCACC AGAATTCACC
AAGAGTAATG TCAAGTTGAT TGCCCTTGTA ACAGACAGTA CTGAGGAACA TCTTGCCTGG AGCAAGGATA TCAATGnnCT TAACAGTGAT GAGCCAACAG AAAAATGCCC TTTTCCCATC
ATTGATGGCA AGGATCAGGA AGGACCTTGA CATCTTGTTG GGCATGCTGG ATCCTTCCGA GATGGAAGAA AAGGAATGGG TGTGAGAGCT TGTGGTGTTT ATTTTTGCTC CTGATAAGAA
ACTGAAGCTG TCTACCCAGC TACCACTAGC AGCAACCTGG ATGAGATTCG TGGGGTAGTT CTCTCTCTCC AGCTGACAGC AGAAGAGAGA AGAGTTCTCT CTCTCCAGCT TACCCTGATG
GATAAGAAGA ATGGAAATAG TTATGTTGCT GGGCATGGTG GCTCATGGCT G
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Retrieve as FASTA
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