Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
333 (317) |
| PWM (Da): |
35591 (34001.2) |
Transmb domain: |
i7-29o |
| PI (pH):
| 8.48 (8.48) |
Peptide Signal:
| cut: 17 range:17-333 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAASLQLAIF MSAAIALGFA GVQAGAAQLC SEYYDRTCPV VHRVARRVLK KAHESDVRIY ASLTRLHFHD CFVQGCDGSI LLDNSSSIAS EKFATPNNNS ARGYPVVDAV KAALEEVCPG
VVSCADILAI AAKISVQLVS GGPRWRVPLG RRDGTTANNL PSPFDNLTTL QQKFGAVGLD DTDLVALSGV ALSGAHTFGR VQCRFVTARL YNFSGTNRPD PTLDRGYRAF LSLRCPRAGG
NASALNDLDP ATPDTFDSDY YTSIEARRGT LQSDQELLST PSAPTAPIVH RFAGSQKEFF RSFARSMISM GSIQVLTGSQ GEIRKNCRVV NGS
|
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from genomic (chromo 9, 3 introns). Frame shift in exon 3. No EST. Incorrect prediction from Phytozome (exon 3 and start of exon 4 are missing) |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGGCTA GTCTTCAGCT CGCCATTTTC ATGTCCGCCG CCATCGCGCT CGGGTTCGCC GGCGTCCAGG CCGGCGCGGC GCAGCTGTGC AGCGAGTACT ACGACCGGAC GTGCCCCGTC
GTGCACCGGG TCGCGCGGCG GGTGCTGAAG AAGGCGCACG AGTCCGACGT CCGCATCTAC GCCAGCCTCA CCCGCCTCCA CTTCCACGAC TGCTTCGTGC AAGTAAAAAA GCAGCTGGCC
CCGTGTCCCG TCCCGTGCAA GTAAAAAGCT TGCTGCTTGC GCCGTACGCA CGTCCTGAGC CTGCGTGTGT TTGTTTCTTC ATCCAGGGCT GCGACGGGTC CATCCTGCTG GACAACAGCT
CCAGCATCGC GTCGGAGAAG TTCGCCACGC CCAACAACAA CTCGGCGCGC GGGTACCCTG TTGTCGACGC CGTCAAGGCG GCGCTGGAGG AGGTCTGTCC AGGCGTCGTC TCCTGTGCTG
ACATACTGGC CATCGCCGCC AAGATCTCGG TCCAGCTGGT GAGTTTTTTA TATATAGAAT CAATCCAATC AACAACAAAT TAGGAACGCA ATGGCACCAA ATTAGGTCCA CCGTACTATG
GAACCAAATG CTACCTAAGA ACGGTATCAT TTTTTAATGA GTTGATCTTG ACAAAACTGC ATTGTTCAAT TAGATTTGAC ACACAGCAGC AAACAAACTA TCTGATTGTC GTTAGCTGCG
TATGTGCCTG GAGCAATAAT TCGGAAGGCG TCGGTGTAAA AAAAAAATTG AACTAGCTAA CTCGTATGGC CATTGGAGAG ATCTATGAGA AGAAGTTGAC AGAATTGAAC GCCATTCCTA
AAAGCATGCA AAAAACACTG ATATTAGTAA TAGCCTAGCT AGTACTCTGT GGATATTCAT ACGTCCCATC ACGTCGGCAG TCACCAGCAG GGGGCTGGAT ATAGATGTCC AAACGGGCCA
CCCAGCACGG ACCCGGCCCG AACCCGTTTC GGCCGGTACG AATAGGGCCG GGCCAGGCAC GGCCCGTTGT TCGGGCCGGG TCGGGCTGAC CCACGTGACT AGGGACATGC CCAAACCCGG
CACGCCTAGG GAAAAATCGT GCCGGGCCGG TCCGTTGGCC CGATGGGCCT CAACGGACCG AGCCGGTCAC TGGCCCGAAC CAACAGTAGA GCGGTATATA AATACATATA TTTAACAGAA
TTAATCATAT ATAATAACAT ATTATTTACA TATATTAAGA CAACAAAATA TTTATGTATA CATTTTATAT TTATGTATGC ATTTTATATA TGTTTGGCCG CGTATTTAGT ATTTACATAT
TATGAGAGAA TTAAATGTAT TTACATATTT AGTATTTACA TAAATATGCG GGCCGCCATC GGGCCGACCT ATTTATCGGG CCGGGTCAGG CCAAAGCCTG CGGACCGCCG TATCTGTCCA
TACCCGGCCC GCTAGACGAA CCGTACCGAC CCGGGCTCGT AACCGACCGT GCCGGGCCGT GTTTGGACCG GGTTAAATTC GTGCCGTGCC ACAGGCCAAA CGGGCGGCCC GCACTCACCA
ATCAGTATCC TTTTCCGTGC CACGCTTTAA TCCAACACGG TCACATGACG CGTGGTCCCC GTTCGTCCGT GTATGCGGTA TGCCCCACTA GTCCGGCGGG CCACGGTGGC GCGTGCCCCT
CGGCCGGCGC GACGGCACCA CCGCCAACAA CCTCCCAAGC CCCTTCGACA ACCTCACCAC GCTCCAGCAG AAGTTCGGAG CCGTCGGCCT GGACGACACC GGACACCGAC CTTGTCGCCC
TCTCAGGTAT CGCGTGATTA TTCTGCACCT GCACGAACAC AGATGCATCG TGGTGGCATG CATCACAAGG ACGGTGGATG CATGCAGGGG CGCATACGTT CGGGCGCGTG CAGTGCCGGT
TCGTGACGGC GCGGCTGTAC AACTTCAGCG GCACGAACCG GCCGGACCCG ACGCTGGACA GGGGGTACCG GGCGTTCCTC TCCCTGCGGT GCCCGAGGGC CGGCGGCAAC GCGTCGGCGC
TCAACGACCT CGACCCGGCC ACGCCGGACA CCTTCGACAG CGACTACTAC ACCAGCATCG AGGCGCGCCG CGGGACGCTG CAGTCCGACC AGGAGCTGCT GTCGACGCCC TCCGCGCCCA
CGGCGCCGAT CGTCCACCGC TTCGCCGGCA GCCAGAAGGA GTTCTTCAGG AGCTTCGCCA GGTCCATGAT CAGCATGGGG AGCATCCAGG TGCTGACGGG GAGCCAGGGT GAGATCAGGA
AGAACTGTAG AGTGGTCAAT GGAAGCTAG
|
Retrieve as FASTA
|
|