Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
357 (330) |
PWM (Da): |
37996.39 (35426.1) |
Transmb domain: |
i7-29o |
PI (pH):
| 8.36 (8.76) |
Peptide Signal:
| cut: 28 range:28-357 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAHAVTLAAA AAVVVLIVVC CCSSSEAAGH SVNARQPPLA PSLSLDFYKR SCPRAESVVR RFVQDAVRRD AGLAAGLLRL HFHDCFVQGC DASVLLDGSA TGPGEQQAPP NLTLRPTAFK
AINDIHDRLQ KECGGAVVSC SDVLALAARD SVVVSGGPSY KVPLGRRDSA SFATREDVLS GLPPPTAAVP ALLAVLSKIN LDATDLVALS GGHTIGLGHC ASFESRLFPR QDPTLNATFA
GHLRRTCPAK GTDRRTPLDV RTPDAFDNKY YVNLVNREGL FTSDQDLFSN PGTRPLVEKF ARSQRDFFDQ FAFSVVKMGQ IKVLTGAQGQ IRRNCSARNA GMTWSVVDEA AQQSFVF
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 3, introns 2 and 3), 19 ESTs and protein expression. All the sequence present the similar frameshift (or sequencing error). Incorrect prediction from Phytozome ( exon 3 is not predicted). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTCATG CTGTTACGCT CGCTGCTGCA GCCGCGGTCG TCGTCCTCAT CGTCGTCTGC TGCTGCTCCT CTTCGGAGGC CGCCGGCCAC AGCGTCAACG CGAGGCAGCC GCCGCTGGCG
CCCAGCCTGT CCTTGGACTT CTACAAGCGG AGCTGCCCCA GGGCGGAGTC CGTCGTGCGG AGGTTCGTGC AGGACGCCGT GCGCAGGGAC GCCGGCCTCG CAGCCGGCCT CCTCCGCCTC
CACTTCCACG ACTGCTTCGT CCAGGGCTGC GACGCGTCCG TGCTCCTGGA CGGCTCAGCC ACCGGCCCGG GCGAGCAGCA GGCGCCGCCC AACCTCACGC TGCGCCCCAC CGCGTTCAAG
GCCATCAACG ACATCCACGA CCGCCTCCAG AAGGAGTGCG GTGGCGCAGT CGTGTCCTGC TCCGACGTCC TCGCGCTCGC CGCCAGGGAC TCAGTCGTCG TGGTACGTCG TGTCGTGGCA
TGCACATGCA CTGCACACTC CTTGATTAAT TAAATTGGTT GGTCGTTCTT CATGCATGCT ATTGCTTACA CTGCCTGCCT GCCTCGCTCG TCTGTCGTCT CCTTAATTGC ATATTTGCAT
GCATTGCAGT CCGGAGGTCC CAGCTACAAG GTGCCGCTGG GTCGGCGCGA CAGTGCGAGC TTCGCGACGC GAGAGGACGT CCTGAGCGGG CTCCCGCCGC CGACGGCCGC CGTGCCGGCG
CTTCTCGCCG TGCTGTACTG CTGTCCAAGA TCAACCTGGA CGCGACGGAC CTGGTGGCGC TGTCGGGCGG CCACACCATC GGGCTGGGCC ACTGCGCGTC CTTCGAGAGC CGCCTGTTCC
CGCGCCAGGA CCCGACGCTG AACGCCACCT TCGCCGGCCA CCTGCGCCGG ACCTGCCCGG CCAAGGGCAC CGACCGCCGG ACGCCGCTGG ACGTGCGCAC GCCCGACGCG TTCGACAACA
AGTACTACGT CAACCTGGTG AACCGTGAGG GGCTCTTCAC CTCCGACCAG GACCTCTTCA GCAACCCCGG CACCAGGCCC CTCGTCGAGA AGTTCGCGCG CAGCCAGAGA GACTTCTTCG
ACCAGTTCGC CTTCTCCGTG GTGAAGATGG GGCAGATCAA GGTGCTCACG GGCGCGCAGG GGCAGATCCG CAGGAACTGC TCCGCCCGCA ACGCAGGCAT GACGTGGTCC GTCGTCGACG
AGGCTGCACA GCAGAGCTTC GTGTTCTAG
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Retrieve as FASTA
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