Entry information : PcKat02
Entry ID 6716
Creation 2009-04-29 (Christophe Dunand)
Last sequence changes 2009-04-29 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2015-12-11 (Catherine Mathe)
Peroxidase information: PcKat02
Name PcKat02
Class Catalase    [Orthogroup: Kat003]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phanerochaete
Organism Phanerochaete chrysosporium    [TaxId: 5306 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PcKat02
start..stop
S start..stop
PcarKat02 1021 0 1..554 1..541
PplKat02 727 0 4..554 29..571
PinvKat02 577 0 4..527 12..530
SbreKat02 561 0 4..527 12..530
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2191467..2191668 202 N° 2 2191726..2191798 73 N° 3 2191852..2191908 57 N° 4 2192002..2192078 77
N° 5 2192132..2192204 73 N° 6 2192253..2192293 41 N° 7 2192342..2192394 53 N° 8 2192445..2192485 41
N° 9 2192537..2192659 123 N° 10 2192709..2192769 61 N° 11 2192826..2193004 179 N° 12 2193058..2193126 69
N° 13 2193193..2193299 107 N° 14 2193358..2193392 35 N° 15 2193446..2193479 34 N° 16 2193533..2193660 128
N° 17 2193712..2193815 104 N° 18 2193870..2194077 208  
join(2191467..2191668,2191726..2191798,2191852..2191908,2192002..2192078,2192132 ..2192204,2192253..2192293,2192342..2192394,2192445..2192485,2192537..2192659,21 92709..2192769,2192826..2193004,2193058..2193126,2193193..2193299,2193358..21933 92,2193446..2193479,2193533..2193660,2193712..2193815,2193870..2194077)


exon

Literature and cross-references PcKat02
Literature Martinez,D., Larrondo,L.F., Putnam,N., Gelpke,M.D., Huang,K., Chapman,J., Helfenbein,K.G., Ramaiya,P., Detter,J.C., Larimer,F., Coutinho,P.M., Henrissat,B., Berka,R., Cullen,D. and Rokhsar,D. Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78. Nat. Biotechnol. 22 (6), 695-700 (2004).
DNA ref. JGI genome:   scaffold_4 (2191467..2194077)
mRNA ref. JGI transcript:   128306
Protein sequence: PcKat02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   554 (535)
PWM (Da):   %s   61463.98 (59684.0)  
PI (pH):   %s   7 (6.77) Peptide Signal:   %s   cut: 20 range:20-554
Sequence 595
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MARAALALALALACAAARAQDAYTFDINAGVDVQAATDAEPAPQLTFATEAGVPYTHPYDAQKIGSDGPLLLQDQHLVETLAHFVRERIPERVVHAKAAGAHGYFEVTNAECVHETLRGHASVLILIQNGLKTPITVRISTVGGEMGSADTARDPRGFSIKFRTRKGIWDLVMNNTPVFFIRDPAKFPHFIHTQKRDPQTHLRDHDMFWDYLSSNPESLYQVMRLFSDLGTPKGVRHLNAWTGHSYRWVKSDGSWVYVKLYCETMQGVQNFTNAEATAIAGANPDYAQQDLFEAIENKTYPGWVMYAQVLTPQQAERFKYNVLDLTKDWGFDDVPRHEIGRFYLTQNPANYFAEIEQAAFSPGRIVPGWEPSTDPVLQARLFSYGDAQRYRLGVNYMQLPVNAPTSPVANFQRDGHMAFSNQGSRPNYLSTLQKINLPPLPYVQDTHQRWMGGAVKSLSEVTAIDFDWPQRFWKSLSEQDQKNLIGNVVGHLGTVKSVSVRQRQVALFALVDPALGKAVADGVGVTVPSPLPSFPAGPTWLNTTKPSDSSTLNY

Retrieve as FASTA  
Remarks Complete sequence from genomic (18 introns). No EST.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGCCCGTGCAGCACTTGCTCTTGCGCTCGCACTCGCGTGCGCCGCGGCGCGCGCGCAGGACGCGTACACGTTCGATATCAACGCGGGCGTCGACGTCCAGGCCGCGACCGACGCGGAGC
CTGCGCCGCAGCTCACGTTTGCGACCGAGGCCGGCGTGCCGTACACGCACCCGTACGACGCACAGAAGATTGGCAGCGACG
GTATGCACATCGCGGCGGCGTGCCTGCTCTCAGGGCGGT
GCTGATGCCGGGAACCAGGACCTCTCCTCCTCCAGGACCAGCACCTCGTCGAGACCCTCGCGCACTTCGTGCGTGAGCGTATTCCGGAGCGGTGAGTGGCCAGCAGTCCCCGCGACGTCG
AAGGCGTGCTGACCAAGACGGTAGTGTTGTGCACGCAAAGGCCGCCGGTGCACATGGGTACTTTGAAGTTACGAATGCAGAGTTTGCGAAAAACTACACTATCATGTAAGTCTCCAATCC
TGCCCGATCCGTGCTCCTATTGATAGCCCATCTTCTAGGGACGTCTTCTCGGAGGTGCGTGCATGAGACCTTGCGCGGTCATGCTTCGGTCCTCATTCTTATTCAGAATGGCTTGAAAAC
CCCGATCACAG
GTGTGTGTGCCTGGTCATCCTGCTAGCGGGCGCAAGTTGAGTTTGTGTTTCAGTACGTATCAGCACCGTCGGTGGAGAGATGGGCTCTGCAGACACCGCCCGCGACCCT
CGTGGCTTCTCGATAAA
GTGAGCATCCCCCGACTACCAATGAGATCATCTTGCTGAGATACTTAGATTCCGCACACGGAAGGGCATCTGGGACCTGGTCATGAACAGTATGTATTTTCAT
CGATGGTGAAGCTATGTACTGACGTCTCCCGCAGACACACCTGTGTTCTTCATCCGCGATCCCGCCAAGTTCCCCCACTTCATTCACGTACGCTTTATCCACAAATCCGGTTAGCGAAGG
CACTCATGTCTCGATAGACCCAGAAGCGCGACCCGCAGACACACCTCCGCGATCACGAGTGCGTACTCTTTCTTCCAAGCTAAAGCACGATTCTGATGGCTTTACACAGCATGTTCTGGG
ATTACCTGAGCTCAAACCCAGAGTCGCTCTACCAGGTGATGCGCCTCTTCTCGGACCTGGGCACGCCCAAGGGTGTGCGCCACCTGAACGCATGGACGGGGCATTCTTACCG
GTACGGCA
TCACAACCCCCTTCCCCAGATCTTGACTGACCTCGGCACAGATGGGTCAAGTCCGACGGCAGCTGGGTCTATGTGAAGCTGTATTGCGAGACGATGCAGGGCGTACGTGCCCCTCGCCGC
GCCCGCGCCCGCGCACCGCTGCTGACGCCCGCCCGCAGGTCCAGAACTTTACAAACGCAGAGGCGACGGCGATCGCGGGCGCGAACCCGGACTACGCGCAGCAGGACCTCTTCGAGGCGA
TCGAGAACAAGACGTACCCCGGCTGGGTGATGTACGCGCAGGTGCTCACGCCGCAGCAGGCGGAGCGCTTCAAGTACAACGTGCTCGACCTCACCAA
GTGCGTGTCCCGCCCGCTGTGGA
ATGTGCGGACCGTCGCTGAGCGCAGGGCAGGGACTGGGGCTTCGACGACGTCCCGCGCCACGAGATCGGCCGCTTCTACCTCACGCAGAACCCCGCAAAGTGAGGCGTCATCTGCGAAGT
CACCCGCCCGCGGAGAAGATGCTCATGTGCTTCCTGTAAACGTAGCTACTTCGCCGAGATCGAGCAGGCGGCGTTCTCTCCTGGACGTATCGTGCCCGGCTGGGAGCCCTCGACGGACCC
GGTATTGCAGGCGCGCCTGTTCTCGTATGGAG
GTGCGCCGCCTGAACGAGACGCATCGTCGGCTGGATGCTTACGTCTCTCACTTTGTAGATGCGCAGCGTTACCGCCTTGGCGTGAACT
ACATG
GTAAGCGGGCGCCTTTACTACTGCAGGGATCGTCGTTGACCTCGTCTTCGTAGCAACTGCCTGTCAACGCACCGACATCGCCTGTTGGTATGTAATCCACTGTGTGTCATATGTT
GCCGGACGCTGACGGTTCCCGACAGCGAACTTCCAGCGTGATGGACATATGGCGTTCAGCAACCAAGGGTCCCGTCCAAATTACCTGTCGACCCTGCAGAAGATCAACCTCCCCCCTCTG
CCCTATGTTCAGGACACTCACCAGCGATGGATG
GTGCGTGGGACCAGGCCCCGCCTTCCCGTTCGTGGCTAATACAACACCCAGGGCGGCGCCGTCAAGTCGCTGTCGGAAGTGACGGCC
ATCGACTTTGACTGGCCGCAACGCTTCTGGAAGAGCCTGTCCGAGCAGGACCAGAAGAACCTCATCGG
GTGCGTCCGTGTCTGATACCCGCGAGCGGCACCCCGCTGAGACTTCCTGTGC
AGCAACGTCGTGGGACACCTGGGCACCGTGAAGAGCGTGTCTGTCCGGCAGCGGCAGGTCGCGCTCTTCGCGCTCGTTGACCCTGCGCTGGGCAAGGCGGTTGCGGACGGCGTGGGCGTC
ACGGTGCCCAGCCCCCTGCCGAGCTTCCCTGCGGGCCCGACGTGGCTCAACACGACGAAGCCGTCGGACAGCAGCACCCTGAATTACTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGCCCGTGCAGCACTTGCTCTTGCGCTCGCACTCGCGTGCGCCGCGGCGCGCGCGCAGGACGCGTACACGTTCGATATCAACGCGGGCGTCGACGTCCAGGCCGCGACCGACGCGGAGC
CTGCGCCGCAGCTCACGTTTGCGACCGAGGCCGGCGTGCCGTACACGCACCCGTACGACGCACAGAAGATTGGCAGCGACG
GACCTCTCCTCCTCCAGGACCAGCACCTCGTCGAGACCC
TCGCGCACTTCGTGCGTGAGCGTATTCCGGAGCG
TGTTGTGCACGCAAAGGCCGCCGGTGCACATGGGTACTTTGAAGTTACGAATGCAGAGTGCGTGCATGAGACCTTGCGCGGTCATG
CTTCGGTCCTCATTCTTATTCAGAATGGCTTGAAAACCCCGATCACAG
TACGTATCAGCACCGTCGGTGGAGAGATGGGCTCTGCAGACACCGCCCGCGACCCTCGTGGCTTCTCGATAA
A
ATTCCGCACACGGAAGGGCATCTGGGACCTGGTCATGAACAACACACCTGTGTTCTTCATCCGCGATCCCGCCAAGTTCCCCCACTTCATTCACACCCAGAAGCGCGACCCGCAGACAC
ACCTCCGCGATCACGA
CATGTTCTGGGATTACCTGAGCTCAAACCCAGAGTCGCTCTACCAGGTGATGCGCCTCTTCTCGGACCTGGGCACGCCCAAGGGTGTGCGCCACCTGAACGCAT
GGACGGGGCATTCTTACCG
ATGGGTCAAGTCCGACGGCAGCTGGGTCTATGTGAAGCTGTATTGCGAGACGATGCAGGGCGTCCAGAACTTTACAAACGCAGAGGCGACGGCGATCGCGG
GCGCGAACCCGGACTACGCGCAGCAGGACCTCTTCGAGGCGATCGAGAACAAGACGTACCCCGGCTGGGTGATGTACGCGCAGGTGCTCACGCCGCAGCAGGCGGAGCGCTTCAAGTACA
ACGTGCTCGACCTCACCAA
GGACTGGGGCTTCGACGACGTCCCGCGCCACGAGATCGGCCGCTTCTACCTCACGCAGAACCCCGCAAACTACTTCGCCGAGATCGAGCAGGCGGCGTTCT
CTCCTGGACGTATCGTGCCCGGCTGGGAGCCCTCGACGGACCCGGTATTGCAGGCGCGCCTGTTCTCGTATGGAG
ATGCGCAGCGTTACCGCCTTGGCGTGAACTACATGCAACTGCCTG
TCAACGCACCGACATCGCCTGTTG
CGAACTTCCAGCGTGATGGACATATGGCGTTCAGCAACCAAGGGTCCCGTCCAAATTACCTGTCGACCCTGCAGAAGATCAACCTCCCCCCTCTGC
CCTATGTTCAGGACACTCACCAGCGATGGATG
GGCGGCGCCGTCAAGTCGCTGTCGGAAGTGACGGCCATCGACTTTGACTGGCCGCAACGCTTCTGGAAGAGCCTGTCCGAGCAGGACC
AGAAGAACCTCATCGG
CAACGTCGTGGGACACCTGGGCACCGTGAAGAGCGTGTCTGTCCGGCAGCGGCAGGTCGCGCTCTTCGCGCTCGTTGACCCTGCGCTGGGCAAGGCGGTTGCGG
ACGGCGTGGGCGTCACGGTGCCCAGCCCCCTGCCGAGCTTCCCTGCGGGCCCGACGTGGCTCAACACGACGAAGCCGTCGGACAGCAGCACCCTGAATTACTGA

Retrieve as FASTA